RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 EFCAB2Q5VUJ9 269 aa25.87■■□□□ 1.73
SNHG17-205ENST00000424235 LRRIQ1Q96JM4 1722 aa25.87■■□□□ 1.73
SNHG17-205ENST00000424235 MYO5CQ9NQX4 1742 aa25.87■■□□□ 1.73
SNHG17-205ENST00000424235 ARHGAP5Q13017 1502 aa25.86■■□□□ 1.73
SNHG17-205ENST00000424235 SCAPERQ9BY12 1400 aa25.83■■□□□ 1.73
SNHG17-205ENST00000424235 MYT1LQ9UL68 1186 aa25.82■■□□□ 1.72
SNHG17-205ENST00000424235 CEP162Q5TB80 1403 aa25.81■■□□□ 1.72
SNHG17-205ENST00000424235 RICTORQ6R327 1708 aa25.8■■□□□ 1.72
SNHG17-205ENST00000424235 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
SNHG17-205ENST00000424235 RIMS1Q86UR5 1692 aaKnown RBP25.79■■□□□ 1.72
SNHG17-205ENST00000424235 LMTK3Q96Q04 1460 aa25.79■■□□□ 1.72
SNHG17-205ENST00000424235 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
SNHG17-205ENST00000424235 ZFYVE16Q7Z3T8 1539 aa25.76■■□□□ 1.71
SNHG17-205ENST00000424235 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
SNHG17-205ENST00000424235 LOC105371045A0A1W2PR82 267 aa25.72■■□□□ 1.71
SNHG17-205ENST00000424235 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
SNHG17-205ENST00000424235 ZNF777Q9ULD5 760 aaPredicted RBP25.71■■□□□ 1.71
SNHG17-205ENST00000424235 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
SNHG17-205ENST00000424235 YEATS2Q9ULM3 1422 aa25.7■■□□□ 1.7
SNHG17-205ENST00000424235 MAGI2Q86UL8 1455 aa25.68■■□□□ 1.7
SNHG17-205ENST00000424235 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
SNHG17-205ENST00000424235 ZNF518AQ6AHZ1 1483 aa25.67■■□□□ 1.7
SNHG17-205ENST00000424235 MLECQ14165 292 aa25.67■■□□□ 1.7
SNHG17-205ENST00000424235 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
SNHG17-205ENST00000424235 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.7
SNHG17-205ENST00000424235 AFAP1Q8N556 730 aa25.64■■□□□ 1.7
SNHG17-205ENST00000424235 HSPA2P54652 639 aa25.63■■□□□ 1.69
SNHG17-205ENST00000424235 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
SNHG17-205ENST00000424235 CFDP1Q9UEE9 299 aaPredicted RBP25.59■■□□□ 1.69
SNHG17-205ENST00000424235 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
SNHG17-205ENST00000424235 ABCC1P33527 1531 aa25.58■■□□□ 1.69
SNHG17-205ENST00000424235 C9orf84Q5VXU9 1444 aa25.58■■□□□ 1.69
SNHG17-205ENST00000424235 ATP10AO60312 1499 aa25.58■■□□□ 1.69
SNHG17-205ENST00000424235 FER1L4A9Z1Z3 1794 aa25.57■■□□□ 1.68
SNHG17-205ENST00000424235 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
SNHG17-205ENST00000424235 GPATCH8Q9UKJ3 1502 aaKnown RBP25.54■■□□□ 1.68
SNHG17-205ENST00000424235 ITSN2Q9NZM3 1697 aa25.54■■□□□ 1.68
SNHG17-205ENST00000424235 TRAPPC8Q9Y2L5 1435 aa25.54■■□□□ 1.68
SNHG17-205ENST00000424235 KDM5CP41229 1560 aa25.53■■□□□ 1.68
SNHG17-205ENST00000424235 SYCP2Q9BX26 1530 aa25.51■■□□□ 1.67
SNHG17-205ENST00000424235 ARHGEF12Q9NZN5 1544 aa25.51■■□□□ 1.67
SNHG17-205ENST00000424235 VPS8Q8N3P4 1428 aa25.5■■□□□ 1.67
SNHG17-205ENST00000424235 SAMD9LQ8IVG5 1584 aa25.49■■□□□ 1.67
SNHG17-205ENST00000424235 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.671e-7■■■■□ 19.4
SNHG17-205ENST00000424235 DIP2CQ9Y2E4 1556 aa25.47■■□□□ 1.67
SNHG17-205ENST00000424235 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
SNHG17-205ENST00000424235 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
SNHG17-205ENST00000424235 MLH3Q9UHC1 1453 aa25.46■■□□□ 1.67
SNHG17-205ENST00000424235 ESF1Q9H501 851 aaKnown RBP25.45■■□□□ 1.66
SNHG17-205ENST00000424235 ABCA6Q8N139 1617 aa25.45■■□□□ 1.66
SNHG17-205ENST00000424235 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
SNHG17-205ENST00000424235 CERKQ8TCT0 537 aa25.43■■□□□ 1.66
SNHG17-205ENST00000424235 SUPT6HQ7KZ85 1726 aaKnown RBP25.42■■□□□ 1.66
SNHG17-205ENST00000424235 PREX1Q8TCU6 1659 aa25.42■■□□□ 1.66
SNHG17-205ENST00000424235 APLP2Q06481 763 aa25.41■■□□□ 1.66
SNHG17-205ENST00000424235 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
SNHG17-205ENST00000424235 ZNF644Q9H582 1327 aaPredicted RBP25.38■■□□□ 1.65
SNHG17-205ENST00000424235 KIAA1107Q9UPP5 1409 aa25.38■■□□□ 1.65
SNHG17-205ENST00000424235 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
SNHG17-205ENST00000424235 CEBPAP49715 358 aaPredicted RBP25.35■■□□□ 1.65
SNHG17-205ENST00000424235 ATP7AQ04656 1500 aa25.35■■□□□ 1.65
SNHG17-205ENST00000424235 REREQ9P2R6 1566 aa25.34■■□□□ 1.65
SNHG17-205ENST00000424235 STRCQ7RTU9 1775 aa25.33■■□□□ 1.65
SNHG17-205ENST00000424235 LRRC9Q6ZRR7 1453 aa25.33■■□□□ 1.65
SNHG17-205ENST00000424235 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
SNHG17-205ENST00000424235 AGLP35573 1532 aa25.28■■□□□ 1.64
SNHG17-205ENST00000424235 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
SNHG17-205ENST00000424235 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
SNHG17-205ENST00000424235 A2MP01023 1474 aa25.25■■□□□ 1.63
SNHG17-205ENST00000424235 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
SNHG17-205ENST00000424235 UHRF1BP1Q6BDS2 1440 aa25.23■■□□□ 1.63
SNHG17-205ENST00000424235 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
SNHG17-205ENST00000424235 GGT6Q6P531 493 aa25.22■■□□□ 1.63
SNHG17-205ENST00000424235 C3P01024 1663 aa25.22■■□□□ 1.63
SNHG17-205ENST00000424235 MBD5Q9P267 1494 aa25.21■■□□□ 1.63
SNHG17-205ENST00000424235 TSPY4P0CV99 314 aa25.2■■□□□ 1.62
SNHG17-205ENST00000424235 TSPY10P0CW01 314 aa25.2■■□□□ 1.62
SNHG17-205ENST00000424235 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.62
SNHG17-205ENST00000424235 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
SNHG17-205ENST00000424235 RSPH4AQ5TD94 716 aa25.18■■□□□ 1.62
SNHG17-205ENST00000424235 ADGBQ8N7X0 1667 aa25.17■■□□□ 1.62
SNHG17-205ENST00000424235 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
SNHG17-205ENST00000424235 DMRT2Q9Y5R5 561 aa25.16■■□□□ 1.62
SNHG17-205ENST00000424235 MYOM3Q5VTT5 1437 aa25.15■■□□□ 1.62
SNHG17-205ENST00000424235 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
SNHG17-205ENST00000424235 PLXNC1O60486 1568 aa25.14■■□□□ 1.62
SNHG17-205ENST00000424235 ILDR2Q71H61 639 aa25.14■■□□□ 1.62
SNHG17-205ENST00000424235 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
SNHG17-205ENST00000424235 KIF3BO15066 747 aa25.1■■□□□ 1.61
SNHG17-205ENST00000424235 PTPRTO14522 1441 aa25.1■■□□□ 1.61
SNHG17-205ENST00000424235 DHX29Q7Z478 1369 aaKnown RBP25.09■■□□□ 1.61
SNHG17-205ENST00000424235 MIA2Q96PC5 1412 aa25.09■■□□□ 1.61
SNHG17-205ENST00000424235 CLTCQ00610 1675 aaKnown RBP25.08■■□□□ 1.61
SNHG17-205ENST00000424235 ZMYM3Q14202 1370 aa25.07■■□□□ 1.6
SNHG17-205ENST00000424235 LTBP4Q8N2S1 1624 aa25.06■■□□□ 1.6
SNHG17-205ENST00000424235 MROH2AA6NES4 1674 aa25.04■■□□□ 1.6
SNHG17-205ENST00000424235 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
SNHG17-205ENST00000424235 NCOA1Q15788 1441 aa25.02■■□□□ 1.6
SNHG17-205ENST00000424235 PPP6R1Q9UPN7 881 aa25.01■■□□□ 1.59
SNHG17-205ENST00000424235 NPATQ14207 1427 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms