RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
POLR1B-205ENST00000424062 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.49
POLR1B-205ENST00000424062 RRBP1Q9P2E9 1410 aaKnown RBP18.07■□□□□ 0.48
POLR1B-205ENST00000424062 PREX2Q70Z35 1606 aa18.06■□□□□ 0.48
POLR1B-205ENST00000424062 ARAP3Q8WWN8 1544 aa18.06■□□□□ 0.48
POLR1B-205ENST00000424062 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
POLR1B-205ENST00000424062 CDC42BPBQ9Y5S2 1711 aa18.05■□□□□ 0.48
POLR1B-205ENST00000424062 MAP3K4Q9Y6R4 1608 aa18.05■□□□□ 0.48
POLR1B-205ENST00000424062 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
POLR1B-205ENST00000424062 PTPN23Q9H3S7 1636 aa18.04■□□□□ 0.48
POLR1B-205ENST00000424062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
POLR1B-205ENST00000424062 FANCAO15360 1455 aa18.03■□□□□ 0.48
POLR1B-205ENST00000424062 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
POLR1B-205ENST00000424062 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
POLR1B-205ENST00000424062 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
POLR1B-205ENST00000424062 ITGAEP38570 1179 aa18.01■□□□□ 0.47
POLR1B-205ENST00000424062 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
POLR1B-205ENST00000424062 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
POLR1B-205ENST00000424062 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
POLR1B-205ENST00000424062 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
POLR1B-205ENST00000424062 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
POLR1B-205ENST00000424062 CFAP74Q9C0B2 1584 aa17.99■□□□□ 0.47
POLR1B-205ENST00000424062 NEO1Q92859 1461 aa17.98■□□□□ 0.47
POLR1B-205ENST00000424062 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
POLR1B-205ENST00000424062 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
POLR1B-205ENST00000424062 TSPY4P0CV99 314 aa17.96■□□□□ 0.47
POLR1B-205ENST00000424062 TSPY10P0CW01 314 aa17.96■□□□□ 0.47
POLR1B-205ENST00000424062 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
POLR1B-205ENST00000424062 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
POLR1B-205ENST00000424062 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
POLR1B-205ENST00000424062 PPRC1Q5VV67 1664 aaKnown RBP17.91■□□□□ 0.46
POLR1B-205ENST00000424062 MBD5Q9P267 1494 aa17.91■□□□□ 0.46
POLR1B-205ENST00000424062 ABCC1P33527 1531 aa17.91■□□□□ 0.46
POLR1B-205ENST00000424062 ABCC5O15440 1437 aa17.9■□□□□ 0.46
POLR1B-205ENST00000424062 SYCP2Q9BX26 1530 aa17.9■□□□□ 0.46
POLR1B-205ENST00000424062 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
POLR1B-205ENST00000424062 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
POLR1B-205ENST00000424062 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
POLR1B-205ENST00000424062 DAPK1P53355 1430 aa17.89■□□□□ 0.46
POLR1B-205ENST00000424062 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
POLR1B-205ENST00000424062 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
POLR1B-205ENST00000424062 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
POLR1B-205ENST00000424062 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
POLR1B-205ENST00000424062 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
POLR1B-205ENST00000424062 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
POLR1B-205ENST00000424062 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
POLR1B-205ENST00000424062 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
POLR1B-205ENST00000424062 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
POLR1B-205ENST00000424062 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
POLR1B-205ENST00000424062 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.45
POLR1B-205ENST00000424062 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
POLR1B-205ENST00000424062 C9orf84Q5VXU9 1444 aa17.82■□□□□ 0.44
POLR1B-205ENST00000424062 RRP7BPQ9NSQ0 103 aa17.82■□□□□ 0.44
POLR1B-205ENST00000424062 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
POLR1B-205ENST00000424062 ROCK1Q13464 1354 aa17.81■□□□□ 0.44
POLR1B-205ENST00000424062 RTEL1-TNFRSF6BF6WH68 1400 aa17.8■□□□□ 0.44
POLR1B-205ENST00000424062 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
POLR1B-205ENST00000424062 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
POLR1B-205ENST00000424062 MAST1Q9Y2H9 1570 aa17.77■□□□□ 0.44
POLR1B-205ENST00000424062 COL17A1Q9UMD9 1497 aaPredicted RBP17.76■□□□□ 0.43
POLR1B-205ENST00000424062 RICTORQ6R327 1708 aa17.76■□□□□ 0.43
POLR1B-205ENST00000424062 ADGRL2O95490 1459 aa17.75■□□□□ 0.43
POLR1B-205ENST00000424062 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
POLR1B-205ENST00000424062 KDM5CP41229 1560 aa17.74■□□□□ 0.43
POLR1B-205ENST00000424062 ADGBQ8N7X0 1667 aa17.74■□□□□ 0.43
POLR1B-205ENST00000424062 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
POLR1B-205ENST00000424062 KIF15Q9NS87 1388 aa17.74■□□□□ 0.43
POLR1B-205ENST00000424062 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
POLR1B-205ENST00000424062 KDM6BO15054 1643 aa17.73■□□□□ 0.43
POLR1B-205ENST00000424062 MAGI2Q86UL8 1455 aa17.73■□□□□ 0.43
POLR1B-205ENST00000424062 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
POLR1B-205ENST00000424062 HECW2Q9P2P5 1572 aa17.71■□□□□ 0.43
POLR1B-205ENST00000424062 NAIPQ13075 1403 aa17.71■□□□□ 0.43
POLR1B-205ENST00000424062 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
POLR1B-205ENST00000424062 HRCP23327 699 aa17.7■□□□□ 0.42
POLR1B-205ENST00000424062 ZMYM4Q5VZL5 1548 aa17.7■□□□□ 0.42
POLR1B-205ENST00000424062 ZFYVE16Q7Z3T8 1539 aa17.7■□□□□ 0.42
POLR1B-205ENST00000424062 INO80Q9ULG1 1556 aaPredicted RBP17.7■□□□□ 0.42
POLR1B-205ENST00000424062 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
POLR1B-205ENST00000424062 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
POLR1B-205ENST00000424062 PLXNC1O60486 1568 aa17.69■□□□□ 0.42
POLR1B-205ENST00000424062 DUOX2Q9NRD8 1548 aa17.67■□□□□ 0.42
POLR1B-205ENST00000424062 DHX29Q7Z478 1369 aaKnown RBP17.67■□□□□ 0.42
POLR1B-205ENST00000424062 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
POLR1B-205ENST00000424062 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
POLR1B-205ENST00000424062 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
POLR1B-205ENST00000424062 ATP10AO60312 1499 aa17.65■□□□□ 0.42
POLR1B-205ENST00000424062 A2MP01023 1474 aa17.65■□□□□ 0.42
POLR1B-205ENST00000424062 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
POLR1B-205ENST00000424062 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.41
POLR1B-205ENST00000424062 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
POLR1B-205ENST00000424062 KIF3BO15066 747 aa17.62■□□□□ 0.41
POLR1B-205ENST00000424062 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
POLR1B-205ENST00000424062 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
POLR1B-205ENST00000424062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.416e-7■■□□□ 11.8
POLR1B-205ENST00000424062 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
POLR1B-205ENST00000424062 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
POLR1B-205ENST00000424062 GGT6Q6P531 493 aa17.56■□□□□ 0.4
POLR1B-205ENST00000424062 NUP155O75694 1391 aa17.55■□□□□ 0.4
POLR1B-205ENST00000424062 KANK1Q14678 1352 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms