RNA–Protein interactions for RNA: ENST00000423719.3

LINC00484-205, long intergenic non-protein coding RNA 484, humanhuman

TSL 2 BASIC

Gene LINC00484, Length 3,023 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00484-205ENST00000423719 HFM1A2PYH4 1435 aa13.27□□□□□ -0.28
LINC00484-205ENST00000423719 KIF14Q15058 1648 aa13.27□□□□□ -0.29
LINC00484-205ENST00000423719 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
LINC00484-205ENST00000423719 ABCC5O15440 1437 aa13.24□□□□□ -0.29
LINC00484-205ENST00000423719 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
LINC00484-205ENST00000423719 KDM6BO15054 1643 aa13.23□□□□□ -0.29
LINC00484-205ENST00000423719 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
LINC00484-205ENST00000423719 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
LINC00484-205ENST00000423719 DAPK1P53355 1430 aa13.22□□□□□ -0.29
LINC00484-205ENST00000423719 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
LINC00484-205ENST00000423719 UACAQ9BZF9 1416 aa13.21□□□□□ -0.29
LINC00484-205ENST00000423719 ABCA8O94911 1581 aa13.21□□□□□ -0.3
LINC00484-205ENST00000423719 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.3
LINC00484-205ENST00000423719 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
LINC00484-205ENST00000423719 TONSLQ96HA7 1378 aa13.19□□□□□ -0.3
LINC00484-205ENST00000423719 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
LINC00484-205ENST00000423719 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
LINC00484-205ENST00000423719 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
LINC00484-205ENST00000423719 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
LINC00484-205ENST00000423719 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
LINC00484-205ENST00000423719 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
LINC00484-205ENST00000423719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00484-205ENST00000423719 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
LINC00484-205ENST00000423719 GTF3C3Q9Y5Q9 886 aa13.14□□□□□ -0.31
LINC00484-205ENST00000423719 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
LINC00484-205ENST00000423719 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
LINC00484-205ENST00000423719 ABCC10Q5T3U5 1492 aa13.12□□□□□ -0.31
LINC00484-205ENST00000423719 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
LINC00484-205ENST00000423719 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
LINC00484-205ENST00000423719 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
LINC00484-205ENST00000423719 PKD2Q13563 968 aa13.11□□□□□ -0.31
LINC00484-205ENST00000423719 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
LINC00484-205ENST00000423719 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
LINC00484-205ENST00000423719 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
LINC00484-205ENST00000423719 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.32
LINC00484-205ENST00000423719 DNMT1P26358 1616 aaKnown RBP13.08□□□□□ -0.32
LINC00484-205ENST00000423719 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
LINC00484-205ENST00000423719 NUP155O75694 1391 aa13.08□□□□□ -0.32
LINC00484-205ENST00000423719 SHROOM2Q13796 1616 aa13.08□□□□□ -0.32
LINC00484-205ENST00000423719 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
LINC00484-205ENST00000423719 ANKRD50Q9ULJ7 1429 aa13.07□□□□□ -0.32
LINC00484-205ENST00000423719 ABCC2Q92887 1545 aa13.07□□□□□ -0.32
LINC00484-205ENST00000423719 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
LINC00484-205ENST00000423719 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
LINC00484-205ENST00000423719 TTC37Q6PGP7 1564 aa13.05□□□□□ -0.32
LINC00484-205ENST00000423719 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
LINC00484-205ENST00000423719 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
LINC00484-205ENST00000423719 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
LINC00484-205ENST00000423719 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
LINC00484-205ENST00000423719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00484-205ENST00000423719 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
LINC00484-205ENST00000423719 MBD5Q9P267 1494 aa13.03□□□□□ -0.32
LINC00484-205ENST00000423719 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.32
LINC00484-205ENST00000423719 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.32
LINC00484-205ENST00000423719 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.33
LINC00484-205ENST00000423719 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
LINC00484-205ENST00000423719 ADCY10Q96PN6 1610 aa13.01□□□□□ -0.33
LINC00484-205ENST00000423719 GCC2Q8IWJ2 1684 aa13.01□□□□□ -0.33
LINC00484-205ENST00000423719 ITSN2Q9NZM3 1697 aa13.01□□□□□ -0.33
LINC00484-205ENST00000423719 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
LINC00484-205ENST00000423719 PZPP20742 1482 aa13□□□□□ -0.33
LINC00484-205ENST00000423719 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00484-205ENST00000423719 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
LINC00484-205ENST00000423719 HSPA5P11021 654 aaKnown RBP13□□□□□ -0.33
LINC00484-205ENST00000423719 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
LINC00484-205ENST00000423719 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
LINC00484-205ENST00000423719 ZCCHC11Q5TAX3 1644 aaKnown RBP12.98□□□□□ -0.33
LINC00484-205ENST00000423719 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
LINC00484-205ENST00000423719 KCNA4P22459 653 aa12.97□□□□□ -0.33
LINC00484-205ENST00000423719 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
LINC00484-205ENST00000423719 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
LINC00484-205ENST00000423719 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
LINC00484-205ENST00000423719 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
LINC00484-205ENST00000423719 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
LINC00484-205ENST00000423719 PLCH2O75038 1416 aa12.95□□□□□ -0.34
LINC00484-205ENST00000423719 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
LINC00484-205ENST00000423719 ASXL2Q76L83 1435 aa12.95□□□□□ -0.34
LINC00484-205ENST00000423719 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
LINC00484-205ENST00000423719 ADGRL2O95490 1459 aa12.94□□□□□ -0.34
LINC00484-205ENST00000423719 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
LINC00484-205ENST00000423719 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
LINC00484-205ENST00000423719 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00484-205ENST00000423719 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
LINC00484-205ENST00000423719 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
LINC00484-205ENST00000423719 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
LINC00484-205ENST00000423719 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
LINC00484-205ENST00000423719 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
LINC00484-205ENST00000423719 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
LINC00484-205ENST00000423719 WASHC2AQ641Q2 1341 aa12.9□□□□□ -0.34
LINC00484-205ENST00000423719 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
LINC00484-205ENST00000423719 KIF3BO15066 747 aa12.9□□□□□ -0.34
LINC00484-205ENST00000423719 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
LINC00484-205ENST00000423719 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
LINC00484-205ENST00000423719 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
LINC00484-205ENST00000423719 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
LINC00484-205ENST00000423719 CROCC2H7BZ55 1655 aa12.89□□□□□ -0.35
LINC00484-205ENST00000423719 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
LINC00484-205ENST00000423719 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
LINC00484-205ENST00000423719 FANCAO15360 1455 aa12.88□□□□□ -0.35
LINC00484-205ENST00000423719 ADGBQ8N7X0 1667 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms