RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
SCN5A-205ENST00000423572 PDE4CQ08493 712 aa14.16□□□□□ -0.14
SCN5A-205ENST00000423572 CLIP1P30622 1438 aa14.16□□□□□ -0.14
SCN5A-205ENST00000423572 HDGFL2Q7Z4V5 671 aaPredicted RBP14.15□□□□□ -0.14
SCN5A-205ENST00000423572 MARCH6O60337 910 aa14.15□□□□□ -0.14
SCN5A-205ENST00000423572 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
SCN5A-205ENST00000423572 MCCP23508 829 aa14.13□□□□□ -0.15
SCN5A-205ENST00000423572 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
SCN5A-205ENST00000423572 FBXW7Q969H0 707 aa14.13□□□□□ -0.15
SCN5A-205ENST00000423572 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
SCN5A-205ENST00000423572 NGDNQ8NEJ9 315 aaKnown RBP14.12□□□□□ -0.15
SCN5A-205ENST00000423572 DDRGK1Q96HY6 314 aa14.12□□□□□ -0.15
SCN5A-205ENST00000423572 CARD11Q9BXL7 1154 aa14.12□□□□□ -0.15
SCN5A-205ENST00000423572 CCAR1Q8IX12 1150 aaKnown RBP14.12□□□□□ -0.15
SCN5A-205ENST00000423572 MS4A1P11836 297 aa14.12□□□□□ -0.15
SCN5A-205ENST00000423572 NOL10Q9BSC4 688 aaKnown RBP14.12□□□□□ -0.15
SCN5A-205ENST00000423572 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
SCN5A-205ENST00000423572 RAD21O60216 631 aa14.11□□□□□ -0.15
SCN5A-205ENST00000423572 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
SCN5A-205ENST00000423572 SYTL4Q96C24 671 aaPredicted RBP14.1□□□□□ -0.15
SCN5A-205ENST00000423572 SPAG9O60271 1321 aaKnown RBP14.1□□□□□ -0.15
SCN5A-205ENST00000423572 FRAT1Q92837 279 aaPredicted RBP14.09□□□□□ -0.15
SCN5A-205ENST00000423572 KAT6BQ8WYB5 2073 aa14.09□□□□□ -0.15
SCN5A-205ENST00000423572 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
SCN5A-205ENST00000423572 AMOTL1Q8IY63 956 aa14.08□□□□□ -0.16
SCN5A-205ENST00000423572 WASHC2AQ641Q2 1341 aa14.07□□□□□ -0.16
SCN5A-205ENST00000423572 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
SCN5A-205ENST00000423572 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
SCN5A-205ENST00000423572 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
SCN5A-205ENST00000423572 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
SCN5A-205ENST00000423572 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
SCN5A-205ENST00000423572 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
SCN5A-205ENST00000423572 TOMM22Q9NS69 142 aa14.03□□□□□ -0.16
SCN5A-205ENST00000423572 A0A0U1RQG5 324 aaPredicted RBP14.03□□□□□ -0.16
SCN5A-205ENST00000423572 AMPHP49418 695 aa14.03□□□□□ -0.16
SCN5A-205ENST00000423572 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
SCN5A-205ENST00000423572 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.16
SCN5A-205ENST00000423572 HDAC5Q9UQL6 1122 aa14.02□□□□□ -0.16
SCN5A-205ENST00000423572 MORC1Q86VD1 984 aa14.02□□□□□ -0.17
SCN5A-205ENST00000423572 DRC7Q8IY82 874 aa14.01□□□□□ -0.17
SCN5A-205ENST00000423572 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
SCN5A-205ENST00000423572 VPS37DQ86XT2 251 aa14.01□□□□□ -0.17
SCN5A-205ENST00000423572 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
SCN5A-205ENST00000423572 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
SCN5A-205ENST00000423572 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
SCN5A-205ENST00000423572 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
SCN5A-205ENST00000423572 TMF1P82094 1093 aa13.99□□□□□ -0.17
SCN5A-205ENST00000423572 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
SCN5A-205ENST00000423572 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
SCN5A-205ENST00000423572 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
SCN5A-205ENST00000423572 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
SCN5A-205ENST00000423572 ATF3P18847 181 aa13.97□□□□□ -0.17
SCN5A-205ENST00000423572 EEA1Q15075 1411 aa13.97□□□□□ -0.17
SCN5A-205ENST00000423572 HSP90B1P14625 803 aaKnown RBP13.96□□□□□ -0.17
SCN5A-205ENST00000423572 APBB1O00213 710 aa13.96□□□□□ -0.17
SCN5A-205ENST00000423572 C1orf141Q5JVX7 400 aa13.96□□□□□ -0.17
SCN5A-205ENST00000423572 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
SCN5A-205ENST00000423572 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
SCN5A-205ENST00000423572 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
SCN5A-205ENST00000423572 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
SCN5A-205ENST00000423572 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
SCN5A-205ENST00000423572 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
SCN5A-205ENST00000423572 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
SCN5A-205ENST00000423572 WASHC2CQ9Y4E1 1318 aa13.93□□□□□ -0.18
SCN5A-205ENST00000423572 R3HCC1Q9Y3T6 440 aaKnown RBP13.93□□□□□ -0.18
SCN5A-205ENST00000423572 PAF1Q8N7H5 531 aa13.93□□□□□ -0.18
SCN5A-205ENST00000423572 HTATSF1O43719 755 aaKnown RBP13.93□□□□□ -0.18
SCN5A-205ENST00000423572 DCAF11Q8TEB1 546 aa13.93□□□□□ -0.18
SCN5A-205ENST00000423572 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
SCN5A-205ENST00000423572 SENP3-EIF4A1A0A087X0R7 540 aa13.91□□□□□ -0.18
SCN5A-205ENST00000423572 TPM4P67936 248 aa13.9□□□□□ -0.18
SCN5A-205ENST00000423572 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
SCN5A-205ENST00000423572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCN5A-205ENST00000423572 PSME1Q06323 249 aa13.9□□□□□ -0.18
SCN5A-205ENST00000423572 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
SCN5A-205ENST00000423572 KIF27Q86VH2 1401 aa13.89□□□□□ -0.19
SCN5A-205ENST00000423572 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
SCN5A-205ENST00000423572 NACADO15069 1562 aa13.89□□□□□ -0.19
SCN5A-205ENST00000423572 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
SCN5A-205ENST00000423572 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
SCN5A-205ENST00000423572 IRX6P78412 446 aaPredicted RBP13.88□□□□□ -0.19
SCN5A-205ENST00000423572 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
SCN5A-205ENST00000423572 EFCAB2Q5VUJ9 269 aa13.87□□□□□ -0.19
SCN5A-205ENST00000423572 PIP4K2BP78356 416 aa13.87□□□□□ -0.19
SCN5A-205ENST00000423572 WDHD1O75717 1129 aaPredicted RBP13.86□□□□□ -0.19
SCN5A-205ENST00000423572 RGS3P49796 1198 aa13.85□□□□□ -0.19
SCN5A-205ENST00000423572 EIF3AQ14152 1382 aaKnown RBP13.85□□□□□ -0.19
SCN5A-205ENST00000423572 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
SCN5A-205ENST00000423572 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
SCN5A-205ENST00000423572 HSCBQ8IWL3 235 aa13.84□□□□□ -0.19
SCN5A-205ENST00000423572 TMEM132AQ24JP5 1023 aa13.84□□□□□ -0.19
SCN5A-205ENST00000423572 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
SCN5A-205ENST00000423572 NUTM2DQ5VT03 806 aaPredicted RBP13.83□□□□□ -0.19
SCN5A-205ENST00000423572 KIF3BO15066 747 aa13.83□□□□□ -0.2
SCN5A-205ENST00000423572 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
SCN5A-205ENST00000423572 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
SCN5A-205ENST00000423572 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
SCN5A-205ENST00000423572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCN5A-205ENST00000423572 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
SCN5A-205ENST00000423572 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms