RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ZNF777Q9ULD5 760 aaPredicted RBP24.63■■□□□ 1.53
BRAT1-202ENST00000421712 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
BRAT1-202ENST00000421712 ARAP3Q8WWN8 1544 aa24.62■■□□□ 1.53
BRAT1-202ENST00000421712 CFDP1Q9UEE9 299 aaPredicted RBP24.6■■□□□ 1.53
BRAT1-202ENST00000421712 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
BRAT1-202ENST00000421712 SUPT6HQ7KZ85 1726 aaKnown RBP24.58■■□□□ 1.53
BRAT1-202ENST00000421712 GPATCH8Q9UKJ3 1502 aaKnown RBP24.58■■□□□ 1.53
BRAT1-202ENST00000421712 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.52
BRAT1-202ENST00000421712 CDC42BPBQ9Y5S2 1711 aa24.58■■□□□ 1.52
BRAT1-202ENST00000421712 DENND4BO75064 1496 aaPredicted RBP24.58■■□□□ 1.52
BRAT1-202ENST00000421712 ADGRL1O94910 1474 aa24.58■■□□□ 1.52
BRAT1-202ENST00000421712 SCAPERQ9BY12 1400 aa24.57■■□□□ 1.52
BRAT1-202ENST00000421712 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
BRAT1-202ENST00000421712 NCOA2Q15596 1464 aa24.56■■□□□ 1.52
BRAT1-202ENST00000421712 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
BRAT1-202ENST00000421712 ITSN2Q9NZM3 1697 aa24.47■■□□□ 1.51
BRAT1-202ENST00000421712 HNRNPMP52272 730 aaKnown RBP eCLIP24.46■■□□□ 1.51
BRAT1-202ENST00000421712 AFAP1Q8N556 730 aa24.46■■□□□ 1.51
BRAT1-202ENST00000421712 POGZQ7Z3K3 1410 aa24.44■■□□□ 1.5
BRAT1-202ENST00000421712 RICTORQ6R327 1708 aa24.44■■□□□ 1.5
BRAT1-202ENST00000421712 ZNF644Q9H582 1327 aaPredicted RBP24.44■■□□□ 1.5
BRAT1-202ENST00000421712 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
BRAT1-202ENST00000421712 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
BRAT1-202ENST00000421712 SAMD9LQ8IVG5 1584 aa24.42■■□□□ 1.5
BRAT1-202ENST00000421712 ABCC1P33527 1531 aa24.42■■□□□ 1.5
BRAT1-202ENST00000421712 ZNF518AQ6AHZ1 1483 aa24.41■■□□□ 1.5
BRAT1-202ENST00000421712 PLEKHH2Q8IVE3 1493 aa24.41■■□□□ 1.5
BRAT1-202ENST00000421712 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
BRAT1-202ENST00000421712 TRAPPC8Q9Y2L5 1435 aa24.39■■□□□ 1.5
BRAT1-202ENST00000421712 SYCP2Q9BX26 1530 aa24.38■■□□□ 1.49
BRAT1-202ENST00000421712 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
BRAT1-202ENST00000421712 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
BRAT1-202ENST00000421712 ZMYM4Q5VZL5 1548 aa24.35■■□□□ 1.49
BRAT1-202ENST00000421712 MAGI2Q86UL8 1455 aa24.34■■□□□ 1.49
BRAT1-202ENST00000421712 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
BRAT1-202ENST00000421712 CAMSAP2Q08AD1 1489 aa24.33■■□□□ 1.49
BRAT1-202ENST00000421712 ZFYVE16Q7Z3T8 1539 aa24.33■■□□□ 1.49
BRAT1-202ENST00000421712 MIA2Q96PC5 1412 aa24.33■■□□□ 1.49
BRAT1-202ENST00000421712 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
BRAT1-202ENST00000421712 YEATS2Q9ULM3 1422 aa24.32■■□□□ 1.48
BRAT1-202ENST00000421712 KDM5CP41229 1560 aa24.3■■□□□ 1.48
BRAT1-202ENST00000421712 RSPH4AQ5TD94 716 aa24.3■■□□□ 1.48
BRAT1-202ENST00000421712 ARHGEF40Q8TER5 1519 aa24.28■■□□□ 1.48
BRAT1-202ENST00000421712 HECW2Q9P2P5 1572 aa24.28■■□□□ 1.48
BRAT1-202ENST00000421712 MBD5Q9P267 1494 aa24.26■■□□□ 1.47
BRAT1-202ENST00000421712 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
BRAT1-202ENST00000421712 TSPY4P0CV99 314 aa24.26■■□□□ 1.47
BRAT1-202ENST00000421712 TSPY10P0CW01 314 aa24.26■■□□□ 1.47
BRAT1-202ENST00000421712 FGD6Q6ZV73 1430 aa24.25■■□□□ 1.47
BRAT1-202ENST00000421712 ATP10AO60312 1499 aa24.25■■□□□ 1.47
BRAT1-202ENST00000421712 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
BRAT1-202ENST00000421712 CCDC141Q6ZP82 1450 aa24.23■■□□□ 1.47
BRAT1-202ENST00000421712 PTPN23Q9H3S7 1636 aa24.23■■□□□ 1.47
BRAT1-202ENST00000421712 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
BRAT1-202ENST00000421712 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
BRAT1-202ENST00000421712 KIDINS220Q9ULH0 1771 aa24.19■■□□□ 1.46
BRAT1-202ENST00000421712 MLECQ14165 292 aa24.19■■□□□ 1.46
BRAT1-202ENST00000421712 ATP7AQ04656 1500 aa24.18■■□□□ 1.46
BRAT1-202ENST00000421712 ARHGEF5Q12774 1597 aa24.17■■□□□ 1.46
BRAT1-202ENST00000421712 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
BRAT1-202ENST00000421712 DIP2CQ9Y2E4 1556 aa24.16■■□□□ 1.46
BRAT1-202ENST00000421712 TCOF1Q13428 1488 aaKnown RBP24.14■■□□□ 1.46
BRAT1-202ENST00000421712 RTEL1-TNFRSF6BF6WH68 1400 aa24.14■■□□□ 1.45
BRAT1-202ENST00000421712 INO80Q9ULG1 1556 aaPredicted RBP24.13■■□□□ 1.45
BRAT1-202ENST00000421712 ABCC5O15440 1437 aa24.1■■□□□ 1.45
BRAT1-202ENST00000421712 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
BRAT1-202ENST00000421712 DAPK1P53355 1430 aa24.09■■□□□ 1.45
BRAT1-202ENST00000421712 A2MP01023 1474 aa24.08■■□□□ 1.45
BRAT1-202ENST00000421712 SIGLEC1Q9BZZ2 1709 aa24.08■■□□□ 1.45
BRAT1-202ENST00000421712 BCORL1Q5H9F3 1711 aa24.07■■□□□ 1.44
BRAT1-202ENST00000421712 ITGAEP38570 1179 aa24.06■■□□□ 1.44
BRAT1-202ENST00000421712 REREQ9P2R6 1566 aa24.06■■□□□ 1.44
BRAT1-202ENST00000421712 DNMT1P26358 1616 aaKnown RBP24.04■■□□□ 1.44
BRAT1-202ENST00000421712 ESF1Q9H501 851 aaKnown RBP24.04■■□□□ 1.44
BRAT1-202ENST00000421712 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
BRAT1-202ENST00000421712 ADGBQ8N7X0 1667 aa24.04■■□□□ 1.44
BRAT1-202ENST00000421712 DHX29Q7Z478 1369 aaKnown RBP24.03■■□□□ 1.44
BRAT1-202ENST00000421712 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
BRAT1-202ENST00000421712 AGLP35573 1532 aa24.01■■□□□ 1.43
BRAT1-202ENST00000421712 GGT6Q6P531 493 aa24.01■■□□□ 1.43
BRAT1-202ENST00000421712 PLPPR3Q6T4P5 718 aa24.01■■□□□ 1.43
BRAT1-202ENST00000421712 ADAMTSL3P82987 1691 aa24.01■■□□□ 1.43
BRAT1-202ENST00000421712 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
BRAT1-202ENST00000421712 CROCC2H7BZ55 1655 aa24■■□□□ 1.43
BRAT1-202ENST00000421712 KIF3BO15066 747 aa24■■□□□ 1.43
BRAT1-202ENST00000421712 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
BRAT1-202ENST00000421712 MADDQ8WXG6 1647 aa23.98■■□□□ 1.43
BRAT1-202ENST00000421712 KIF15Q9NS87 1388 aa23.97■■□□□ 1.43
BRAT1-202ENST00000421712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
BRAT1-202ENST00000421712 PLXNC1O60486 1568 aa23.95■■□□□ 1.43
BRAT1-202ENST00000421712 RRBP1Q9P2E9 1410 aaKnown RBP23.95■■□□□ 1.42
BRAT1-202ENST00000421712 RIMS1Q86UR5 1692 aaKnown RBP23.93■■□□□ 1.42
BRAT1-202ENST00000421712 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
BRAT1-202ENST00000421712 PTPRMP28827 1452 aa23.92■■□□□ 1.42
BRAT1-202ENST00000421712 DUOX2Q9NRD8 1548 aa23.91■■□□□ 1.42
BRAT1-202ENST00000421712 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
BRAT1-202ENST00000421712 PTPRKQ15262 1439 aa23.9■■□□□ 1.42
BRAT1-202ENST00000421712 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
BRAT1-202ENST00000421712 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
BRAT1-202ENST00000421712 CEBPAP49715 358 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms