RNA–Protein interactions for RNA: ENST00000421423.1

LINC00403-201, humanhuman

TSL 2 BASIC

Gene LINC00403, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00403-201ENST00000421423 ZFYVE16Q7Z3T8 1539 aa17.58■□□□□ 0.41
LINC00403-201ENST00000421423 HECW1Q76N89 1606 aa17.58■□□□□ 0.4
LINC00403-201ENST00000421423 MLECQ14165 292 aa17.57■□□□□ 0.4
LINC00403-201ENST00000421423 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
LINC00403-201ENST00000421423 ATP10AO60312 1499 aa17.56■□□□□ 0.4
LINC00403-201ENST00000421423 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
LINC00403-201ENST00000421423 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
LINC00403-201ENST00000421423 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
LINC00403-201ENST00000421423 CLIP1P30622 1438 aa17.54■□□□□ 0.4
LINC00403-201ENST00000421423 RIMS1Q86UR5 1692 aaKnown RBP17.53■□□□□ 0.4
LINC00403-201ENST00000421423 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
LINC00403-201ENST00000421423 HSPA2P54652 639 aa17.52■□□□□ 0.4
LINC00403-201ENST00000421423 MYO5CQ9NQX4 1742 aa17.5■□□□□ 0.39
LINC00403-201ENST00000421423 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
LINC00403-201ENST00000421423 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
LINC00403-201ENST00000421423 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
LINC00403-201ENST00000421423 KIF14Q15058 1648 aa17.49■□□□□ 0.39
LINC00403-201ENST00000421423 ARHGAP5Q13017 1502 aa17.48■□□□□ 0.39
LINC00403-201ENST00000421423 SIGLEC1Q9BZZ2 1709 aa17.48■□□□□ 0.39
LINC00403-201ENST00000421423 CASKIN1Q8WXD9 1431 aa17.47■□□□□ 0.39
LINC00403-201ENST00000421423 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
LINC00403-201ENST00000421423 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
LINC00403-201ENST00000421423 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
LINC00403-201ENST00000421423 KDM5CP41229 1560 aa17.42■□□□□ 0.38
LINC00403-201ENST00000421423 FER1L4A9Z1Z3 1794 aa17.42■□□□□ 0.38
LINC00403-201ENST00000421423 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
LINC00403-201ENST00000421423 LRRIQ1Q96JM4 1722 aa17.4■□□□□ 0.38
LINC00403-201ENST00000421423 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
LINC00403-201ENST00000421423 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
LINC00403-201ENST00000421423 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
LINC00403-201ENST00000421423 TRAPPC8Q9Y2L5 1435 aa17.38■□□□□ 0.37
LINC00403-201ENST00000421423 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
LINC00403-201ENST00000421423 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
LINC00403-201ENST00000421423 REREQ9P2R6 1566 aa17.36■□□□□ 0.37
LINC00403-201ENST00000421423 ZNF777Q9ULD5 760 aaPredicted RBP17.35■□□□□ 0.37
LINC00403-201ENST00000421423 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
LINC00403-201ENST00000421423 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
LINC00403-201ENST00000421423 PREX2Q70Z35 1606 aa17.33■□□□□ 0.37
LINC00403-201ENST00000421423 ABCC1P33527 1531 aa17.33■□□□□ 0.37
LINC00403-201ENST00000421423 AGLP35573 1532 aa17.33■□□□□ 0.37
LINC00403-201ENST00000421423 UHRF1BP1Q6BDS2 1440 aa17.32■□□□□ 0.36
LINC00403-201ENST00000421423 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC00403-201ENST00000421423 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
LINC00403-201ENST00000421423 PREX1Q8TCU6 1659 aa17.31■□□□□ 0.36
LINC00403-201ENST00000421423 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
LINC00403-201ENST00000421423 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
LINC00403-201ENST00000421423 GPATCH8Q9UKJ3 1502 aaKnown RBP17.3■□□□□ 0.36
LINC00403-201ENST00000421423 CDC42BPAQ5VT25 1732 aa17.29■□□□□ 0.36
LINC00403-201ENST00000421423 ITSN2Q9NZM3 1697 aa17.28■□□□□ 0.36
LINC00403-201ENST00000421423 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
LINC00403-201ENST00000421423 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
LINC00403-201ENST00000421423 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
LINC00403-201ENST00000421423 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
LINC00403-201ENST00000421423 SAMD9LQ8IVG5 1584 aa17.25■□□□□ 0.35
LINC00403-201ENST00000421423 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
LINC00403-201ENST00000421423 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
LINC00403-201ENST00000421423 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
LINC00403-201ENST00000421423 ZMYM3Q14202 1370 aa17.23■□□□□ 0.35
LINC00403-201ENST00000421423 C3P01024 1663 aa17.23■□□□□ 0.35
LINC00403-201ENST00000421423 PTPRTO14522 1441 aa17.22■□□□□ 0.35
LINC00403-201ENST00000421423 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
LINC00403-201ENST00000421423 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
LINC00403-201ENST00000421423 NPATQ14207 1427 aa17.21■□□□□ 0.34
LINC00403-201ENST00000421423 GGT6Q6P531 493 aa17.18■□□□□ 0.34
LINC00403-201ENST00000421423 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
LINC00403-201ENST00000421423 A2MP01023 1474 aa17.18■□□□□ 0.34
LINC00403-201ENST00000421423 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
LINC00403-201ENST00000421423 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
LINC00403-201ENST00000421423 SUPT6HQ7KZ85 1726 aaKnown RBP17.14■□□□□ 0.33
LINC00403-201ENST00000421423 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
LINC00403-201ENST00000421423 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
LINC00403-201ENST00000421423 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
LINC00403-201ENST00000421423 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
LINC00403-201ENST00000421423 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
LINC00403-201ENST00000421423 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
LINC00403-201ENST00000421423 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
LINC00403-201ENST00000421423 PKD2Q13563 968 aa17.11■□□□□ 0.33
LINC00403-201ENST00000421423 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
LINC00403-201ENST00000421423 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
LINC00403-201ENST00000421423 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
LINC00403-201ENST00000421423 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
LINC00403-201ENST00000421423 CAMSAP1Q5T5Y3 1602 aa17.09■□□□□ 0.33
LINC00403-201ENST00000421423 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
LINC00403-201ENST00000421423 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
LINC00403-201ENST00000421423 KIF3BO15066 747 aa17.07■□□□□ 0.32
LINC00403-201ENST00000421423 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
LINC00403-201ENST00000421423 ADGBQ8N7X0 1667 aa17.07■□□□□ 0.32
LINC00403-201ENST00000421423 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
LINC00403-201ENST00000421423 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
LINC00403-201ENST00000421423 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
LINC00403-201ENST00000421423 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
LINC00403-201ENST00000421423 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
LINC00403-201ENST00000421423 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
LINC00403-201ENST00000421423 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
LINC00403-201ENST00000421423 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
LINC00403-201ENST00000421423 TCOF1Q13428 1488 aaKnown RBP17■□□□□ 0.31
LINC00403-201ENST00000421423 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
LINC00403-201ENST00000421423 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
LINC00403-201ENST00000421423 DISP3Q9P2K9 1392 aa17■□□□□ 0.31
LINC00403-201ENST00000421423 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms