RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 ITSN2Q9NZM3 1697 aa26.88■■□□□ 1.89
PPFIA3-202ENST00000421230 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
PPFIA3-202ENST00000421230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.87■■□□□ 1.89
PPFIA3-202ENST00000421230 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
PPFIA3-202ENST00000421230 TTC37Q6PGP7 1564 aa26.86■■□□□ 1.89
PPFIA3-202ENST00000421230 WDR7Q9Y4E6 1490 aa26.86■■□□□ 1.89
PPFIA3-202ENST00000421230 ASXL2Q76L83 1435 aa26.86■■□□□ 1.89
PPFIA3-202ENST00000421230 ZNF777Q9ULD5 760 aaPredicted RBP26.84■■□□□ 1.89
PPFIA3-202ENST00000421230 PTPRKQ15262 1439 aa26.78■■□□□ 1.88
PPFIA3-202ENST00000421230 CDC42BPBQ9Y5S2 1711 aa26.78■■□□□ 1.88
PPFIA3-202ENST00000421230 CAMSAP2Q08AD1 1489 aa26.77■■□□□ 1.88
PPFIA3-202ENST00000421230 ZNF316A6NFI3 1004 aaPredicted RBP26.77■■□□□ 1.88
PPFIA3-202ENST00000421230 PREX2Q70Z35 1606 aa26.77■■□□□ 1.88
PPFIA3-202ENST00000421230 MYO5CQ9NQX4 1742 aa26.74■■□□□ 1.87
PPFIA3-202ENST00000421230 ARHGAP5Q13017 1502 aa26.71■■□□□ 1.87
PPFIA3-202ENST00000421230 CHIC2Q9UKJ5 165 aa26.7■■□□□ 1.87
PPFIA3-202ENST00000421230 PLCH2O75038 1416 aa26.68■■□□□ 1.86
PPFIA3-202ENST00000421230 DAPK1P53355 1430 aa26.68■■□□□ 1.86
PPFIA3-202ENST00000421230 ABCC5O15440 1437 aa26.67■■□□□ 1.86
PPFIA3-202ENST00000421230 DNMT1P26358 1616 aaKnown RBP26.67■■□□□ 1.86
PPFIA3-202ENST00000421230 ABCA9Q8IUA7 1624 aa26.67■■□□□ 1.86
PPFIA3-202ENST00000421230 SAMD9LQ8IVG5 1584 aa26.66■■□□□ 1.86
PPFIA3-202ENST00000421230 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
PPFIA3-202ENST00000421230 HNRNPMP52272 730 aaKnown RBP eCLIP26.64■■□□□ 1.86
PPFIA3-202ENST00000421230 SETD5Q9C0A6 1442 aa26.63■■□□□ 1.85
PPFIA3-202ENST00000421230 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
PPFIA3-202ENST00000421230 EFCAB2Q5VUJ9 269 aa26.61■■□□□ 1.85
PPFIA3-202ENST00000421230 RRP7BPQ9NSQ0 103 aa26.61■■□□□ 1.85
PPFIA3-202ENST00000421230 SYCP2Q9BX26 1530 aa26.57■■□□□ 1.84
PPFIA3-202ENST00000421230 MBD5Q9P267 1494 aa26.56■■□□□ 1.84
PPFIA3-202ENST00000421230 HFM1A2PYH4 1435 aa26.56■■□□□ 1.84
PPFIA3-202ENST00000421230 CROCC2H7BZ55 1655 aa26.55■■□□□ 1.84
PPFIA3-202ENST00000421230 NAIPQ13075 1403 aa26.55■■□□□ 1.84
PPFIA3-202ENST00000421230 ARAP3Q8WWN8 1544 aa26.55■■□□□ 1.84
PPFIA3-202ENST00000421230 AKNAQ7Z591 1439 aa26.54■■□□□ 1.84
PPFIA3-202ENST00000421230 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
PPFIA3-202ENST00000421230 FANCAO15360 1455 aa26.53■■□□□ 1.84
PPFIA3-202ENST00000421230 ARHGEF5Q12774 1597 aa26.52■■□□□ 1.84
PPFIA3-202ENST00000421230 ARHGEF12Q9NZN5 1544 aa26.52■■□□□ 1.84
PPFIA3-202ENST00000421230 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
PPFIA3-202ENST00000421230 KIAA1107Q9UPP5 1409 aa26.5■■□□□ 1.83
PPFIA3-202ENST00000421230 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
PPFIA3-202ENST00000421230 ROCK1Q13464 1354 aa26.49■■□□□ 1.83
PPFIA3-202ENST00000421230 TSPY4P0CV99 314 aa26.49■■□□□ 1.83
PPFIA3-202ENST00000421230 TSPY10P0CW01 314 aa26.49■■□□□ 1.83
PPFIA3-202ENST00000421230 ABCC1P33527 1531 aa26.48■■□□□ 1.83
PPFIA3-202ENST00000421230 C9orf84Q5VXU9 1444 aa26.47■■□□□ 1.83
PPFIA3-202ENST00000421230 GCC2Q8IWJ2 1684 aa26.47■■□□□ 1.83
PPFIA3-202ENST00000421230 ADGBQ8N7X0 1667 aa26.47■■□□□ 1.83
PPFIA3-202ENST00000421230 FAM69CQ0P6D2 419 aa26.46■■□□□ 1.83
PPFIA3-202ENST00000421230 RSPH4AQ5TD94 716 aa26.46■■□□□ 1.83
PPFIA3-202ENST00000421230 NCOA1Q15788 1441 aa26.45■■□□□ 1.82
PPFIA3-202ENST00000421230 SHANK2Q9UPX8 1470 aa26.45■■□□□ 1.82
PPFIA3-202ENST00000421230 MIER1Q8N108 512 aa26.45■■□□□ 1.82
PPFIA3-202ENST00000421230 DIP2BQ9P265 1576 aa26.44■■□□□ 1.82
PPFIA3-202ENST00000421230 DHX57Q6P158 1386 aaKnown RBP26.44■■□□□ 1.82
PPFIA3-202ENST00000421230 KDM6BO15054 1643 aa26.44■■□□□ 1.82
PPFIA3-202ENST00000421230 ADGRL2O95490 1459 aa26.43■■□□□ 1.82
PPFIA3-202ENST00000421230 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
PPFIA3-202ENST00000421230 GLI2P10070 1586 aa26.43■■□□□ 1.82
PPFIA3-202ENST00000421230 ANKRD30AQ9BXX3 1397 aa26.42■■□□□ 1.82
PPFIA3-202ENST00000421230 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
PPFIA3-202ENST00000421230 MAP3K4Q9Y6R4 1608 aa26.41■■□□□ 1.82
PPFIA3-202ENST00000421230 ADGRL1O94910 1474 aa26.41■■□□□ 1.82
PPFIA3-202ENST00000421230 YTHDC1Q96MU7 727 aaKnown RBP26.39■■□□□ 1.82
PPFIA3-202ENST00000421230 AFAP1Q8N556 730 aa26.39■■□□□ 1.81
PPFIA3-202ENST00000421230 SCAPERQ9BY12 1400 aa26.38■■□□□ 1.81
PPFIA3-202ENST00000421230 CFAP74Q9C0B2 1584 aa26.34■■□□□ 1.81
PPFIA3-202ENST00000421230 MAST1Q9Y2H9 1570 aa26.34■■□□□ 1.81
PPFIA3-202ENST00000421230 TSPOAP1O95153 1857 aa26.33■■□□□ 1.8
PPFIA3-202ENST00000421230 KIF15Q9NS87 1388 aa26.32■■□□□ 1.8
PPFIA3-202ENST00000421230 KIF13AQ9H1H9 1805 aa26.31■■□□□ 1.8
PPFIA3-202ENST00000421230 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
PPFIA3-202ENST00000421230 SPAG9O60271 1321 aaKnown RBP26.3■■□□□ 1.8
PPFIA3-202ENST00000421230 NEO1Q92859 1461 aa26.29■■□□□ 1.8
PPFIA3-202ENST00000421230 ANKRD50Q9ULJ7 1429 aa26.29■■□□□ 1.8
PPFIA3-202ENST00000421230 PLXNC1O60486 1568 aa26.25■■□□□ 1.79
PPFIA3-202ENST00000421230 PPRC1Q5VV67 1664 aaKnown RBP26.25■■□□□ 1.79
PPFIA3-202ENST00000421230 MYT1LQ9UL68 1186 aa26.24■■□□□ 1.79
PPFIA3-202ENST00000421230 ZFYVE16Q7Z3T8 1539 aa26.24■■□□□ 1.79
PPFIA3-202ENST00000421230 ZNF518AQ6AHZ1 1483 aa26.22■■□□□ 1.79
PPFIA3-202ENST00000421230 POGZQ7Z3K3 1410 aa26.22■■□□□ 1.79
PPFIA3-202ENST00000421230 RAPGEF3O95398 923 aa26.21■■□□□ 1.79
PPFIA3-202ENST00000421230 RTEL1-TNFRSF6BF6WH68 1400 aa26.21■■□□□ 1.79
PPFIA3-202ENST00000421230 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.78
PPFIA3-202ENST00000421230 ATP7AQ04656 1500 aa26.2■■□□□ 1.78
PPFIA3-202ENST00000421230 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
PPFIA3-202ENST00000421230 DENND4BO75064 1496 aaPredicted RBP26.18■■□□□ 1.78
PPFIA3-202ENST00000421230 TEX14Q8IWB6 1497 aa26.16■■□□□ 1.78
PPFIA3-202ENST00000421230 DUOX2Q9NRD8 1548 aa26.16■■□□□ 1.78
PPFIA3-202ENST00000421230 MPHOSPH9Q99550 1183 aa26.15■■□□□ 1.78
PPFIA3-202ENST00000421230 KDM5CP41229 1560 aa26.15■■□□□ 1.78
PPFIA3-202ENST00000421230 KIDINS220Q9ULH0 1771 aa26.15■■□□□ 1.78
PPFIA3-202ENST00000421230 RICTORQ6R327 1708 aa26.12■■□□□ 1.77
PPFIA3-202ENST00000421230 SLC4A1APQ9BWU0 796 aaKnown RBP26.1■■□□□ 1.77
PPFIA3-202ENST00000421230 NUP155O75694 1391 aa26.1■■□□□ 1.77
PPFIA3-202ENST00000421230 PZPP20742 1482 aa26.09■■□□□ 1.77
PPFIA3-202ENST00000421230 HECW2Q9P2P5 1572 aa26.09■■□□□ 1.77
PPFIA3-202ENST00000421230 ERBINQ96RT1 1412 aa26.09■■□□□ 1.77
PPFIA3-202ENST00000421230 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms