RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 NRDCO43847 1150 aa14.26□□□□□ -0.13
FN1-207ENST00000421182 ANKRD30AQ9BXX3 1397 aa14.26□□□□□ -0.13
FN1-207ENST00000421182 U2SURPO15042 1029 aaKnown RBP14.26□□□□□ -0.13
FN1-207ENST00000421182 MCCP23508 829 aa14.25□□□□□ -0.13
FN1-207ENST00000421182 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
FN1-207ENST00000421182 UACAQ9BZF9 1416 aa14.23□□□□□ -0.13
FN1-207ENST00000421182 GGT6Q6P531 493 aa14.22□□□□□ -0.13
FN1-207ENST00000421182 SPAG9O60271 1321 aaKnown RBP14.21□□□□□ -0.13
FN1-207ENST00000421182 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.13
FN1-207ENST00000421182 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
FN1-207ENST00000421182 IPO8O15397 1037 aaKnown RBP14.2□□□□□ -0.14
FN1-207ENST00000421182 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
FN1-207ENST00000421182 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
FN1-207ENST00000421182 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
FN1-207ENST00000421182 L1TD1Q5T7N2 865 aaKnown RBP14.18□□□□□ -0.14
FN1-207ENST00000421182 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
FN1-207ENST00000421182 ROCK2O75116 1388 aaKnown RBP14.17□□□□□ -0.14
FN1-207ENST00000421182 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
FN1-207ENST00000421182 CSB-PGBD3P0DP91 1061 aa14.17□□□□□ -0.14
FN1-207ENST00000421182 TERF2IPQ9NYB0 399 aa14.17□□□□□ -0.14
FN1-207ENST00000421182 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
FN1-207ENST00000421182 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
FN1-207ENST00000421182 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
FN1-207ENST00000421182 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
FN1-207ENST00000421182 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
FN1-207ENST00000421182 GPATCH3Q96I76 525 aa14.15□□□□□ -0.14
FN1-207ENST00000421182 CC2D1BQ5T0F9 858 aaKnown RBP14.14□□□□□ -0.15
FN1-207ENST00000421182 HIRIP3Q9BW71 556 aaPredicted RBP14.14□□□□□ -0.15
FN1-207ENST00000421182 TULP1O00294 542 aaPredicted RBP14.13□□□□□ -0.15
FN1-207ENST00000421182 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
FN1-207ENST00000421182 KIAA1211Q6ZU35 1233 aa14.12□□□□□ -0.15
FN1-207ENST00000421182 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
FN1-207ENST00000421182 GOLGA6L4A6NEF3 574 aa14.12□□□□□ -0.15
FN1-207ENST00000421182 HSP90AB1P08238 724 aaKnown RBP14.12□□□□□ -0.15
FN1-207ENST00000421182 WASHC2CQ9Y4E1 1318 aa14.12□□□□□ -0.15
FN1-207ENST00000421182 NAP1L2Q9ULW6 460 aaPredicted RBP14.12□□□□□ -0.15
FN1-207ENST00000421182 NUP155O75694 1391 aa14.11□□□□□ -0.15
FN1-207ENST00000421182 LMOD3Q0VAK6 560 aa14.11□□□□□ -0.15
FN1-207ENST00000421182 STK26Q9P289 416 aa14.1□□□□□ -0.15
FN1-207ENST00000421182 GNL2Q13823 731 aaKnown RBP14.1□□□□□ -0.15
FN1-207ENST00000421182 CCDC34Q96HJ3 373 aa14.09□□□□□ -0.15
FN1-207ENST00000421182 NBR1Q14596 966 aa14.09□□□□□ -0.15
FN1-207ENST00000421182 CCDC9Q9Y3X0 531 aaKnown RBP14.09□□□□□ -0.15
FN1-207ENST00000421182 G3V3G9 751 aa14.09□□□□□ -0.15
FN1-207ENST00000421182 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
FN1-207ENST00000421182 CFAP65Q6ZU64 1925 aaKnown RBP14.08□□□□□ -0.16
FN1-207ENST00000421182 SOX12O15370 315 aa14.08□□□□□ -0.16
FN1-207ENST00000421182 RALBP1Q15311 655 aa14.07□□□□□ -0.16
FN1-207ENST00000421182 PKD2Q13563 968 aa14.07□□□□□ -0.16
FN1-207ENST00000421182 ISY1Q9ULR0 285 aaKnown RBP14.07□□□□□ -0.16
FN1-207ENST00000421182 PTMSP20962 102 aa14.07□□□□□ -0.16
FN1-207ENST00000421182 STK31Q9BXU1 1019 aa14.06□□□□□ -0.16
FN1-207ENST00000421182 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
FN1-207ENST00000421182 LAMC3Q9Y6N6 1575 aa14.06□□□□□ -0.16
FN1-207ENST00000421182 CHAF1AQ13111 956 aaPredicted RBP14.06□□□□□ -0.16
FN1-207ENST00000421182 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
FN1-207ENST00000421182 KIAA2012Q0VF49 1180 aa14.06□□□□□ -0.16
FN1-207ENST00000421182 DNTTIP2Q5QJE6 756 aaKnown RBP14.06□□□□□ -0.16
FN1-207ENST00000421182 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
FN1-207ENST00000421182 NGDNQ8NEJ9 315 aaKnown RBP14.06□□□□□ -0.16
FN1-207ENST00000421182 PHLDB1Q86UU1 1377 aa14.05□□□□□ -0.16
FN1-207ENST00000421182 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
FN1-207ENST00000421182 MIER1Q8N108 512 aa14.05□□□□□ -0.16
FN1-207ENST00000421182 KIF3BO15066 747 aa14.05□□□□□ -0.16
FN1-207ENST00000421182 PTPRGP23470 1445 aa14.05□□□□□ -0.16
FN1-207ENST00000421182 CUX1P39880 1505 aa14.05□□□□□ -0.16
FN1-207ENST00000421182 SAFB2Q14151 953 aaKnown RBP eCLIP14.05□□□□□ -0.16
FN1-207ENST00000421182 CLSTN1O94985 981 aa14.04□□□□□ -0.16
FN1-207ENST00000421182 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
FN1-207ENST00000421182 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
FN1-207ENST00000421182 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
FN1-207ENST00000421182 PPP4R2Q9NY27 417 aa14.03□□□□□ -0.16
FN1-207ENST00000421182 HMMRO75330 724 aa14.02□□□□□ -0.17
FN1-207ENST00000421182 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
FN1-207ENST00000421182 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
FN1-207ENST00000421182 AMPHP49418 695 aa14□□□□□ -0.17
FN1-207ENST00000421182 CCDC144AA2RUR9 1427 aa14□□□□□ -0.17
FN1-207ENST00000421182 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
FN1-207ENST00000421182 CCER2I3L3R5 266 aa13.99□□□□□ -0.17
FN1-207ENST00000421182 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
FN1-207ENST00000421182 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.172e-9■■□□□ 12.6
FN1-207ENST00000421182 MPHOSPH9Q99550 1183 aa13.98□□□□□ -0.17
FN1-207ENST00000421182 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
FN1-207ENST00000421182 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
FN1-207ENST00000421182 NCAPD3P42695 1498 aa13.98□□□□□ -0.17
FN1-207ENST00000421182 EVA1CP58658 441 aa13.98□□□□□ -0.17
FN1-207ENST00000421182 FAM69CQ0P6D2 419 aa13.98□□□□□ -0.17
FN1-207ENST00000421182 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
FN1-207ENST00000421182 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
FN1-207ENST00000421182 GTF2E1P29083 439 aaPredicted RBP13.97□□□□□ -0.17
FN1-207ENST00000421182 CUL7Q14999 1698 aa13.96□□□□□ -0.17
FN1-207ENST00000421182 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
FN1-207ENST00000421182 RGS3P49796 1198 aa13.96□□□□□ -0.18
FN1-207ENST00000421182 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
FN1-207ENST00000421182 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
FN1-207ENST00000421182 SIN3AQ96ST3 1273 aa13.95□□□□□ -0.18
FN1-207ENST00000421182 ERICH6BQ5W0A0 696 aa13.95□□□□□ -0.18
FN1-207ENST00000421182 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
FN1-207ENST00000421182 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
FN1-207ENST00000421182 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms