RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 PLPPR3Q6T4P5 718 aa28.96■■■□□ 2.23
ECHDC3-202ENST00000420401 LRRIQ1Q96JM4 1722 aa28.96■■■□□ 2.23
ECHDC3-202ENST00000420401 AKNAQ7Z591 1439 aa28.95■■■□□ 2.23
ECHDC3-202ENST00000420401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.94■■■□□ 2.22
ECHDC3-202ENST00000420401 POGZQ7Z3K3 1410 aa28.93■■■□□ 2.22
ECHDC3-202ENST00000420401 FANCAO15360 1455 aa28.92■■■□□ 2.22
ECHDC3-202ENST00000420401 HSPA2P54652 639 aa28.88■■■□□ 2.21
ECHDC3-202ENST00000420401 KIF14Q15058 1648 aa28.87■■■□□ 2.21
ECHDC3-202ENST00000420401 TTC37Q6PGP7 1564 aa28.86■■■□□ 2.21
ECHDC3-202ENST00000420401 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
ECHDC3-202ENST00000420401 ZFYVE16Q7Z3T8 1539 aa28.84■■■□□ 2.21
ECHDC3-202ENST00000420401 ZMYM4Q5VZL5 1548 aa28.83■■■□□ 2.21
ECHDC3-202ENST00000420401 PLCH2O75038 1416 aa28.82■■■□□ 2.2
ECHDC3-202ENST00000420401 MLECQ14165 292 aa28.81■■■□□ 2.2
ECHDC3-202ENST00000420401 FER1L4A9Z1Z3 1794 aa28.8■■■□□ 2.2
ECHDC3-202ENST00000420401 MAGI2Q86UL8 1455 aa28.79■■■□□ 2.2
ECHDC3-202ENST00000420401 YEATS2Q9ULM3 1422 aa28.79■■■□□ 2.2
ECHDC3-202ENST00000420401 SIGLEC1Q9BZZ2 1709 aa28.78■■■□□ 2.2
ECHDC3-202ENST00000420401 MTUS2Q5JR59 1369 aa28.77■■■□□ 2.2
ECHDC3-202ENST00000420401 EFCAB2Q5VUJ9 269 aa28.76■■■□□ 2.19
ECHDC3-202ENST00000420401 CERKQ8TCT0 537 aa28.73■■■□□ 2.19
ECHDC3-202ENST00000420401 MYO5CQ9NQX4 1742 aa28.72■■■□□ 2.19
ECHDC3-202ENST00000420401 SCAPERQ9BY12 1400 aa28.72■■■□□ 2.19
ECHDC3-202ENST00000420401 ARHGAP5Q13017 1502 aa28.68■■■□□ 2.18
ECHDC3-202ENST00000420401 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
ECHDC3-202ENST00000420401 ATP10AO60312 1499 aa28.65■■■□□ 2.18
ECHDC3-202ENST00000420401 PREX1Q8TCU6 1659 aa28.64■■■□□ 2.18
ECHDC3-202ENST00000420401 TIAM1Q13009 1591 aa28.64■■■□□ 2.18
ECHDC3-202ENST00000420401 APLP2Q06481 763 aa28.63■■■□□ 2.17
ECHDC3-202ENST00000420401 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
ECHDC3-202ENST00000420401 C9orf84Q5VXU9 1444 aa28.61■■■□□ 2.17
ECHDC3-202ENST00000420401 MAP3K1Q13233 1512 aa28.61■■■□□ 2.17
ECHDC3-202ENST00000420401 ARHGEF12Q9NZN5 1544 aa28.61■■■□□ 2.17
ECHDC3-202ENST00000420401 PREX2Q70Z35 1606 aa28.6■■■□□ 2.17
ECHDC3-202ENST00000420401 GPATCH8Q9UKJ3 1502 aaKnown RBP28.59■■■□□ 2.17
ECHDC3-202ENST00000420401 CEBPAP49715 358 aaPredicted RBP28.57■■■□□ 2.16
ECHDC3-202ENST00000420401 MYT1LQ9UL68 1186 aa28.57■■■□□ 2.16
ECHDC3-202ENST00000420401 CDC42BPBQ9Y5S2 1711 aa28.57■■■□□ 2.16
ECHDC3-202ENST00000420401 LRRC9Q6ZRR7 1453 aa28.56■■■□□ 2.16
ECHDC3-202ENST00000420401 CFDP1Q9UEE9 299 aaPredicted RBP28.56■■■□□ 2.16
ECHDC3-202ENST00000420401 DMRT2Q9Y5R5 561 aa28.55■■■□□ 2.16
ECHDC3-202ENST00000420401 CDC42BPAQ5VT25 1732 aa28.55■■■□□ 2.16
ECHDC3-202ENST00000420401 SETD1BQ9UPS6 1966 aaKnown RBP28.54■■■□□ 2.16
ECHDC3-202ENST00000420401 ZNF777Q9ULD5 760 aaPredicted RBP28.53■■■□□ 2.16
ECHDC3-202ENST00000420401 ZNF518AQ6AHZ1 1483 aa28.52■■■□□ 2.16
ECHDC3-202ENST00000420401 KANK4Q5T7N3 995 aaPredicted RBP28.51■■■□□ 2.15
ECHDC3-202ENST00000420401 SUPT6HQ7KZ85 1726 aaKnown RBP28.51■■■□□ 2.15
ECHDC3-202ENST00000420401 NCOA2Q15596 1464 aa28.51■■■□□ 2.15
ECHDC3-202ENST00000420401 STRCQ7RTU9 1775 aa28.49■■■□□ 2.15
ECHDC3-202ENST00000420401 UHRF1BP1Q6BDS2 1440 aa28.47■■■□□ 2.15
ECHDC3-202ENST00000420401 AFAP1Q8N556 730 aa28.47■■■□□ 2.15
ECHDC3-202ENST00000420401 ABCC1P33527 1531 aa28.45■■■□□ 2.15
ECHDC3-202ENST00000420401 KDM5CP41229 1560 aa28.44■■■□□ 2.14
ECHDC3-202ENST00000420401 PLEKHH2Q8IVE3 1493 aa28.43■■■□□ 2.14
ECHDC3-202ENST00000420401 DISP3Q9P2K9 1392 aa28.43■■■□□ 2.14
ECHDC3-202ENST00000420401 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
ECHDC3-202ENST00000420401 ESF1Q9H501 851 aaKnown RBP28.42■■■□□ 2.14
ECHDC3-202ENST00000420401 KIAA1107Q9UPP5 1409 aa28.41■■■□□ 2.14
ECHDC3-202ENST00000420401 SAMD9LQ8IVG5 1584 aa28.41■■■□□ 2.14
ECHDC3-202ENST00000420401 DIP2CQ9Y2E4 1556 aa28.41■■■□□ 2.14
ECHDC3-202ENST00000420401 HNRNPMP52272 730 aaKnown RBP eCLIP28.39■■■□□ 2.14
ECHDC3-202ENST00000420401 TRAPPC8Q9Y2L5 1435 aa28.39■■■□□ 2.14
ECHDC3-202ENST00000420401 C3P01024 1663 aa28.38■■■□□ 2.13
ECHDC3-202ENST00000420401 REREQ9P2R6 1566 aa28.37■■■□□ 2.13
ECHDC3-202ENST00000420401 SYCP2Q9BX26 1530 aa28.35■■■□□ 2.13
ECHDC3-202ENST00000420401 ZNF644Q9H582 1327 aaPredicted RBP28.35■■■□□ 2.13
ECHDC3-202ENST00000420401 ABCA6Q8N139 1617 aa28.35■■■□□ 2.13
ECHDC3-202ENST00000420401 MLH3Q9UHC1 1453 aa28.33■■■□□ 2.13
ECHDC3-202ENST00000420401 PTPRTO14522 1441 aa28.31■■■□□ 2.12
ECHDC3-202ENST00000420401 ILDR2Q71H61 639 aa28.3■■■□□ 2.12
ECHDC3-202ENST00000420401 SPAG9O60271 1321 aaKnown RBP28.29■■■□□ 2.12
ECHDC3-202ENST00000420401 MYOM3Q5VTT5 1437 aa28.28■■■□□ 2.12
ECHDC3-202ENST00000420401 AGLP35573 1532 aa28.28■■■□□ 2.12
ECHDC3-202ENST00000420401 RSPH4AQ5TD94 716 aa28.27■■■□□ 2.12
ECHDC3-202ENST00000420401 MIA2Q96PC5 1412 aa28.26■■■□□ 2.12
ECHDC3-202ENST00000420401 CAMSAP2Q08AD1 1489 aa28.26■■■□□ 2.11
ECHDC3-202ENST00000420401 SOCS7O14512 581 aa28.25■■■□□ 2.11
ECHDC3-202ENST00000420401 MBD5Q9P267 1494 aa28.25■■■□□ 2.11
ECHDC3-202ENST00000420401 KIDINS220Q9ULH0 1771 aa28.22■■■□□ 2.11
ECHDC3-202ENST00000420401 CNTLNQ9NXG0 1405 aa28.22■■■□□ 2.11
ECHDC3-202ENST00000420401 SPATA31D1Q6ZQQ2 1576 aa28.2■■■□□ 2.1
ECHDC3-202ENST00000420401 LTBP4Q8N2S1 1624 aa28.18■■■□□ 2.1
ECHDC3-202ENST00000420401 CCDC141Q6ZP82 1450 aa28.17■■■□□ 2.1
ECHDC3-202ENST00000420401 ATP7AQ04656 1500 aa28.16■■■□□ 2.1
ECHDC3-202ENST00000420401 NCOA1Q15788 1441 aa28.16■■■□□ 2.1
ECHDC3-202ENST00000420401 TSPY4P0CV99 314 aa28.15■■■□□ 2.1
ECHDC3-202ENST00000420401 TSPY10P0CW01 314 aa28.15■■■□□ 2.1
ECHDC3-202ENST00000420401 IQSEC2Q5JU85 1478 aa28.15■■■□□ 2.1
ECHDC3-202ENST00000420401 MROH2AA6NES4 1674 aa28.14■■■□□ 2.1
ECHDC3-202ENST00000420401 RTEL1-TNFRSF6BF6WH68 1400 aa28.14■■■□□ 2.1
ECHDC3-202ENST00000420401 ARHGEF5Q12774 1597 aa28.13■■■□□ 2.09
ECHDC3-202ENST00000420401 INO80Q9ULG1 1556 aaPredicted RBP28.12■■■□□ 2.09
ECHDC3-202ENST00000420401 CAMSAP1Q5T5Y3 1602 aa28.12■■■□□ 2.09
ECHDC3-202ENST00000420401 FGD6Q6ZV73 1430 aa28.11■■■□□ 2.09
ECHDC3-202ENST00000420401 NPATQ14207 1427 aa28.09■■■□□ 2.09
ECHDC3-202ENST00000420401 ZMYM3Q14202 1370 aa28.08■■■□□ 2.09
ECHDC3-202ENST00000420401 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
ECHDC3-202ENST00000420401 A2MP01023 1474 aa28.05■■■□□ 2.08
ECHDC3-202ENST00000420401 CLTCQ00610 1675 aaKnown RBP28.05■■■□□ 2.08
ECHDC3-202ENST00000420401 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms