RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ABCC5O15440 1437 aa31.12■■■□□ 2.57
GPC1-202ENST00000420138 NAIPQ13075 1403 aa31.12■■■□□ 2.57
GPC1-202ENST00000420138 DAPK1P53355 1430 aa31.11■■■□□ 2.57
GPC1-202ENST00000420138 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
GPC1-202ENST00000420138 WDR7Q9Y4E6 1490 aa31.09■■■□□ 2.57
GPC1-202ENST00000420138 CLSPNQ9HAW4 1339 aa31.08■■■□□ 2.57
GPC1-202ENST00000420138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.07■■■□□ 2.57
GPC1-202ENST00000420138 AKNAQ7Z591 1439 aa31.07■■■□□ 2.56
GPC1-202ENST00000420138 TTC37Q6PGP7 1564 aa31.07■■■□□ 2.56
GPC1-202ENST00000420138 KCNH8Q96L42 1107 aa31.06■■■□□ 2.56
GPC1-202ENST00000420138 ASXL2Q76L83 1435 aa31.05■■■□□ 2.56
GPC1-202ENST00000420138 CHIC2Q9UKJ5 165 aa31.05■■■□□ 2.56
GPC1-202ENST00000420138 MYO5CQ9NQX4 1742 aa31.03■■■□□ 2.56
GPC1-202ENST00000420138 ZNF777Q9ULD5 760 aaPredicted RBP31.03■■■□□ 2.56
GPC1-202ENST00000420138 PREX2Q70Z35 1606 aa31.01■■■□□ 2.56
GPC1-202ENST00000420138 CDC42BPBQ9Y5S2 1711 aa31■■■□□ 2.55
GPC1-202ENST00000420138 ROCK1Q13464 1354 aa31■■■□□ 2.55
GPC1-202ENST00000420138 RRP7BPQ9NSQ0 103 aa30.99■■■□□ 2.55
GPC1-202ENST00000420138 MAPKBP1O60336 1514 aa30.96■■■□□ 2.55
GPC1-202ENST00000420138 GCC2Q8IWJ2 1684 aa30.96■■■□□ 2.55
GPC1-202ENST00000420138 SAMD9LQ8IVG5 1584 aa30.92■■■□□ 2.54
GPC1-202ENST00000420138 ABCA9Q8IUA7 1624 aa30.91■■■□□ 2.54
GPC1-202ENST00000420138 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
GPC1-202ENST00000420138 ARHGAP5Q13017 1502 aa30.89■■■□□ 2.54
GPC1-202ENST00000420138 CROCC2H7BZ55 1655 aa30.89■■■□□ 2.53
GPC1-202ENST00000420138 KDM6BO15054 1643 aa30.88■■■□□ 2.53
GPC1-202ENST00000420138 PLCH2O75038 1416 aa30.88■■■□□ 2.53
GPC1-202ENST00000420138 ADGRL2O95490 1459 aa30.88■■■□□ 2.53
GPC1-202ENST00000420138 NCOA1Q15788 1441 aa30.86■■■□□ 2.53
GPC1-202ENST00000420138 ARHGEF5Q12774 1597 aa30.86■■■□□ 2.53
GPC1-202ENST00000420138 SHANK2Q9UPX8 1470 aa30.85■■■□□ 2.53
GPC1-202ENST00000420138 HNRNPMP52272 730 aaKnown RBP eCLIP30.84■■■□□ 2.53
GPC1-202ENST00000420138 ARAP3Q8WWN8 1544 aa30.79■■■□□ 2.52
GPC1-202ENST00000420138 ADGBQ8N7X0 1667 aa30.79■■■□□ 2.52
GPC1-202ENST00000420138 C9orf84Q5VXU9 1444 aa30.79■■■□□ 2.52
GPC1-202ENST00000420138 KIAA1107Q9UPP5 1409 aa30.78■■■□□ 2.52
GPC1-202ENST00000420138 SYCP2Q9BX26 1530 aa30.76■■■□□ 2.52
GPC1-202ENST00000420138 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.52
GPC1-202ENST00000420138 RSPH4AQ5TD94 716 aa30.75■■■□□ 2.51
GPC1-202ENST00000420138 ANKRD30AQ9BXX3 1397 aa30.75■■■□□ 2.51
GPC1-202ENST00000420138 PLEKHH2Q8IVE3 1493 aa30.74■■■□□ 2.51
GPC1-202ENST00000420138 ARHGEF12Q9NZN5 1544 aa30.74■■■□□ 2.51
GPC1-202ENST00000420138 EFCAB2Q5VUJ9 269 aa30.73■■■□□ 2.51
GPC1-202ENST00000420138 TSPY4P0CV99 314 aa30.72■■■□□ 2.51
GPC1-202ENST00000420138 TSPY10P0CW01 314 aa30.72■■■□□ 2.51
GPC1-202ENST00000420138 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.51
GPC1-202ENST00000420138 FANCAO15360 1455 aa30.67■■■□□ 2.5
GPC1-202ENST00000420138 ABCC1P33527 1531 aa30.67■■■□□ 2.5
GPC1-202ENST00000420138 CD109Q6YHK3 1445 aa30.67■■■□□ 2.5
GPC1-202ENST00000420138 GLI2P10070 1586 aa30.66■■■□□ 2.5
GPC1-202ENST00000420138 DIP2BQ9P265 1576 aa30.66■■■□□ 2.5
GPC1-202ENST00000420138 MAP3K4Q9Y6R4 1608 aa30.65■■■□□ 2.5
GPC1-202ENST00000420138 ACIN1Q9UKV3 1341 aaKnown RBP30.65■■■□□ 2.5
GPC1-202ENST00000420138 MAST1Q9Y2H9 1570 aa30.65■■■□□ 2.5
GPC1-202ENST00000420138 TRIM52Q96A61 297 aa30.64■■■□□ 2.5
GPC1-202ENST00000420138 SIN3AQ96ST3 1273 aa30.64■■■□□ 2.5
GPC1-202ENST00000420138 ANKRD50Q9ULJ7 1429 aa30.63■■■□□ 2.49
GPC1-202ENST00000420138 CFAP74Q9C0B2 1584 aa30.63■■■□□ 2.49
GPC1-202ENST00000420138 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
GPC1-202ENST00000420138 KIF15Q9NS87 1388 aa30.6■■■□□ 2.49
GPC1-202ENST00000420138 MPHOSPH9Q99550 1183 aa30.6■■■□□ 2.49
GPC1-202ENST00000420138 TRAPPC8Q9Y2L5 1435 aa30.59■■■□□ 2.49
GPC1-202ENST00000420138 KIF13AQ9H1H9 1805 aa30.55■■■□□ 2.48
GPC1-202ENST00000420138 FAM69CQ0P6D2 419 aa30.54■■■□□ 2.48
GPC1-202ENST00000420138 ADGRL1O94910 1474 aa30.54■■■□□ 2.48
GPC1-202ENST00000420138 PZPP20742 1482 aa30.53■■■□□ 2.48
GPC1-202ENST00000420138 NEUROD1Q13562 356 aa30.52■■■□□ 2.48
GPC1-202ENST00000420138 TSPOAP1O95153 1857 aa30.51■■■□□ 2.47
GPC1-202ENST00000420138 PLXNC1O60486 1568 aa30.51■■■□□ 2.47
GPC1-202ENST00000420138 TIMELESSQ9UNS1 1208 aa30.49■■■□□ 2.47
GPC1-202ENST00000420138 SCAPERQ9BY12 1400 aa30.47■■■□□ 2.47
GPC1-202ENST00000420138 NEO1Q92859 1461 aa30.46■■■□□ 2.47
GPC1-202ENST00000420138 AFAP1Q8N556 730 aa30.46■■■□□ 2.47
GPC1-202ENST00000420138 SLC4A1APQ9BWU0 796 aaKnown RBP30.44■■■□□ 2.46
GPC1-202ENST00000420138 RTEL1-TNFRSF6BF6WH68 1400 aa30.43■■■□□ 2.46
GPC1-202ENST00000420138 PPRC1Q5VV67 1664 aaKnown RBP30.43■■■□□ 2.46
GPC1-202ENST00000420138 KDM5DQ9BY66 1539 aa30.43■■■□□ 2.46
GPC1-202ENST00000420138 FOXD1Q16676 465 aa30.43■■■□□ 2.46
GPC1-202ENST00000420138 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
GPC1-202ENST00000420138 ZFYVE16Q7Z3T8 1539 aa30.4■■■□□ 2.46
GPC1-202ENST00000420138 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.46
GPC1-202ENST00000420138 DUOX2Q9NRD8 1548 aa30.39■■■□□ 2.46
GPC1-202ENST00000420138 NUP155O75694 1391 aa30.38■■■□□ 2.45
GPC1-202ENST00000420138 ZNF518AQ6AHZ1 1483 aa30.36■■■□□ 2.45
GPC1-202ENST00000420138 ZNF316A6NFI3 1004 aaPredicted RBP30.36■■■□□ 2.45
GPC1-202ENST00000420138 INO80Q9ULG1 1556 aaPredicted RBP30.35■■■□□ 2.45
GPC1-202ENST00000420138 TEX14Q8IWB6 1497 aa30.35■■■□□ 2.45
GPC1-202ENST00000420138 ERBINQ96RT1 1412 aa30.34■■■□□ 2.45
GPC1-202ENST00000420138 POGZQ7Z3K3 1410 aa30.33■■■□□ 2.45
GPC1-202ENST00000420138 ATP7AQ04656 1500 aa30.32■■■□□ 2.44
GPC1-202ENST00000420138 PPP1R15AO75807 674 aaPredicted RBP30.31■■■□□ 2.44
GPC1-202ENST00000420138 TONSLQ96HA7 1378 aa30.31■■■□□ 2.44
GPC1-202ENST00000420138 UNC13BO14795 1591 aa30.3■■■□□ 2.44
GPC1-202ENST00000420138 PKD2Q13563 968 aa30.3■■■□□ 2.44
GPC1-202ENST00000420138 KDM5CP41229 1560 aa30.3■■■□□ 2.44
GPC1-202ENST00000420138 RICTORQ6R327 1708 aa30.29■■■□□ 2.44
GPC1-202ENST00000420138 KIDINS220Q9ULH0 1771 aa30.27■■■□□ 2.44
GPC1-202ENST00000420138 RPRD2Q5VT52 1461 aaKnown RBP30.26■■■□□ 2.43
GPC1-202ENST00000420138 MAGI2Q86UL8 1455 aa30.26■■■□□ 2.43
GPC1-202ENST00000420138 FAM135AQ9P2D6 1515 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms