RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 LRRIQ1Q96JM4 1722 aa15.52■□□□□ 0.08
PHF3-203ENST00000420043 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
PHF3-203ENST00000420043 NUP153P49790 1475 aaKnown RBP15.51■□□□□ 0.07
PHF3-203ENST00000420043 RAPGEF3O95398 923 aa15.5■□□□□ 0.07
PHF3-203ENST00000420043 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
PHF3-203ENST00000420043 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
PHF3-203ENST00000420043 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
PHF3-203ENST00000420043 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
PHF3-203ENST00000420043 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
PHF3-203ENST00000420043 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
PHF3-203ENST00000420043 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.06
PHF3-203ENST00000420043 ARAP3Q8WWN8 1544 aa15.45■□□□□ 0.06
PHF3-203ENST00000420043 ITGAEP38570 1179 aa15.45■□□□□ 0.06
PHF3-203ENST00000420043 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
PHF3-203ENST00000420043 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
PHF3-203ENST00000420043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
PHF3-203ENST00000420043 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
PHF3-203ENST00000420043 NEO1Q92859 1461 aa15.39■□□□□ 0.05
PHF3-203ENST00000420043 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
PHF3-203ENST00000420043 ARID4BQ4LE39 1312 aaPredicted RBP15.37■□□□□ 0.05
PHF3-203ENST00000420043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
PHF3-203ENST00000420043 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
PHF3-203ENST00000420043 AKNAQ7Z591 1439 aa15.35■□□□□ 0.05
PHF3-203ENST00000420043 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
PHF3-203ENST00000420043 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
PHF3-203ENST00000420043 FANCAO15360 1455 aa15.33■□□□□ 0.05
PHF3-203ENST00000420043 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
PHF3-203ENST00000420043 DENND4BO75064 1496 aaPredicted RBP15.33■□□□□ 0.04
PHF3-203ENST00000420043 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
PHF3-203ENST00000420043 TTC37Q6PGP7 1564 aa15.32■□□□□ 0.04
PHF3-203ENST00000420043 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
PHF3-203ENST00000420043 TCOF1Q13428 1488 aaKnown RBP15.31■□□□□ 0.04
PHF3-203ENST00000420043 KIF14Q15058 1648 aa15.3■□□□□ 0.04
PHF3-203ENST00000420043 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
PHF3-203ENST00000420043 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
PHF3-203ENST00000420043 PTPRMP28827 1452 aa15.28■□□□□ 0.04
PHF3-203ENST00000420043 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
PHF3-203ENST00000420043 PLCH2O75038 1416 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 YEATS2Q9ULM3 1422 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 ADAMTSL3P82987 1691 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 MLECQ14165 292 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
PHF3-203ENST00000420043 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
PHF3-203ENST00000420043 GPATCH8Q9UKJ3 1502 aaKnown RBP15.24■□□□□ 0.03
PHF3-203ENST00000420043 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
PHF3-203ENST00000420043 BCORL1Q5H9F3 1711 aa15.23■□□□□ 0.03
PHF3-203ENST00000420043 CFAP74Q9C0B2 1584 aa15.23■□□□□ 0.03
PHF3-203ENST00000420043 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
PHF3-203ENST00000420043 MADDQ8WXG6 1647 aa15.22■□□□□ 0.03
PHF3-203ENST00000420043 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
PHF3-203ENST00000420043 CLSPNQ9HAW4 1339 aa15.2■□□□□ 0.02
PHF3-203ENST00000420043 PTPRKQ15262 1439 aa15.2■□□□□ 0.02
PHF3-203ENST00000420043 AFAP1Q8N556 730 aa15.2■□□□□ 0.02
PHF3-203ENST00000420043 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
PHF3-203ENST00000420043 DHX57Q6P158 1386 aaKnown RBP15.2■□□□□ 0.02
PHF3-203ENST00000420043 CAMSAP2Q08AD1 1489 aa15.2■□□□□ 0.02
PHF3-203ENST00000420043 HFM1A2PYH4 1435 aa15.19■□□□□ 0.02
PHF3-203ENST00000420043 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
PHF3-203ENST00000420043 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
PHF3-203ENST00000420043 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
PHF3-203ENST00000420043 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
PHF3-203ENST00000420043 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
PHF3-203ENST00000420043 MYT1LQ9UL68 1186 aa15.18■□□□□ 0.02
PHF3-203ENST00000420043 DAPK1P53355 1430 aa15.17■□□□□ 0.02
PHF3-203ENST00000420043 MAGI2Q86UL8 1455 aa15.17■□□□□ 0.02
PHF3-203ENST00000420043 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
PHF3-203ENST00000420043 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
PHF3-203ENST00000420043 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
PHF3-203ENST00000420043 DNMT1P26358 1616 aaKnown RBP15.16■□□□□ 0.02
PHF3-203ENST00000420043 CDC42BPAQ5VT25 1732 aa15.15■□□□□ 0.02
PHF3-203ENST00000420043 HSPA2P54652 639 aa15.15■□□□□ 0.02
PHF3-203ENST00000420043 RRP7BPQ9NSQ0 103 aa15.15■□□□□ 0.02
PHF3-203ENST00000420043 ABCC5O15440 1437 aa15.15■□□□□ 0.02
PHF3-203ENST00000420043 NAIPQ13075 1403 aa15.14■□□□□ 0.01
PHF3-203ENST00000420043 ATP10AO60312 1499 aa15.14■□□□□ 0.01
PHF3-203ENST00000420043 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
PHF3-203ENST00000420043 LMTK3Q96Q04 1460 aa15.13■□□□□ 0.01
PHF3-203ENST00000420043 CEBPAP49715 358 aaPredicted RBP15.12■□□□□ 0.01
PHF3-203ENST00000420043 PREX2Q70Z35 1606 aa15.12■□□□□ 0.01
PHF3-203ENST00000420043 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
PHF3-203ENST00000420043 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
PHF3-203ENST00000420043 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
PHF3-203ENST00000420043 ZNF518AQ6AHZ1 1483 aa15.1■□□□□ 0.01
PHF3-203ENST00000420043 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
PHF3-203ENST00000420043 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
PHF3-203ENST00000420043 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
PHF3-203ENST00000420043 CDC42BPBQ9Y5S2 1711 aa15.09■□□□□ 0.01
PHF3-203ENST00000420043 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
PHF3-203ENST00000420043 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0.01
PHF3-203ENST00000420043 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0.01
PHF3-203ENST00000420043 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
PHF3-203ENST00000420043 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
PHF3-203ENST00000420043 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
PHF3-203ENST00000420043 TRIM52Q96A61 297 aa15.07■□□□□ 0
PHF3-203ENST00000420043 SHANK2Q9UPX8 1470 aa15.06■□□□□ 0
PHF3-203ENST00000420043 KDM5CP41229 1560 aa15.05■□□□□ -0
PHF3-203ENST00000420043 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
PHF3-203ENST00000420043 SAMD9LQ8IVG5 1584 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms