RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
EPHA4-205ENST00000419964 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
EPHA4-205ENST00000419964 PDE4AP27815 886 aa12.12□□□□□ -0.47
EPHA4-205ENST00000419964 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
EPHA4-205ENST00000419964 SEC24BO95487 1268 aa12.11□□□□□ -0.47
EPHA4-205ENST00000419964 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
EPHA4-205ENST00000419964 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
EPHA4-205ENST00000419964 G3V3G9 751 aa12.1□□□□□ -0.47
EPHA4-205ENST00000419964 NBR1Q14596 966 aa12.1□□□□□ -0.47
EPHA4-205ENST00000419964 SMARCA4P51532 1647 aa12.1□□□□□ -0.47
EPHA4-205ENST00000419964 C7P10643 843 aa12.09□□□□□ -0.47
EPHA4-205ENST00000419964 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
EPHA4-205ENST00000419964 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
EPHA4-205ENST00000419964 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
EPHA4-205ENST00000419964 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
EPHA4-205ENST00000419964 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
EPHA4-205ENST00000419964 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
EPHA4-205ENST00000419964 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
EPHA4-205ENST00000419964 E2F4Q16254 413 aa12.03□□□□□ -0.48
EPHA4-205ENST00000419964 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
EPHA4-205ENST00000419964 TMEM121BQ9BXQ6 578 aaPredicted RBP12.03□□□□□ -0.48
EPHA4-205ENST00000419964 METRNQ9UJH8 293 aa12.03□□□□□ -0.48
EPHA4-205ENST00000419964 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
EPHA4-205ENST00000419964 WIZO95785 1651 aa12.03□□□□□ -0.48
EPHA4-205ENST00000419964 MFSD10Q14728 455 aa12.02□□□□□ -0.49
EPHA4-205ENST00000419964 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
EPHA4-205ENST00000419964 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
EPHA4-205ENST00000419964 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
EPHA4-205ENST00000419964 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
EPHA4-205ENST00000419964 TMC2Q8TDI7 906 aa11.99□□□□□ -0.49
EPHA4-205ENST00000419964 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
EPHA4-205ENST00000419964 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
EPHA4-205ENST00000419964 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
EPHA4-205ENST00000419964 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
EPHA4-205ENST00000419964 FOXK1P85037 733 aa11.9□□□□□ -0.5
EPHA4-205ENST00000419964 CAMK2BQ13554 666 aa11.9□□□□□ -0.5
EPHA4-205ENST00000419964 DSG2Q14126 1118 aa11.9□□□□□ -0.5
EPHA4-205ENST00000419964 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
EPHA4-205ENST00000419964 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
EPHA4-205ENST00000419964 KIF3CO14782 793 aa11.88□□□□□ -0.51
EPHA4-205ENST00000419964 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
EPHA4-205ENST00000419964 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
EPHA4-205ENST00000419964 PLPP6Q8IY26 295 aa11.85□□□□□ -0.51
EPHA4-205ENST00000419964 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
EPHA4-205ENST00000419964 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
EPHA4-205ENST00000419964 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
EPHA4-205ENST00000419964 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
EPHA4-205ENST00000419964 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
EPHA4-205ENST00000419964 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
EPHA4-205ENST00000419964 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
EPHA4-205ENST00000419964 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
EPHA4-205ENST00000419964 NCAPD3P42695 1498 aa11.78□□□□□ -0.52
EPHA4-205ENST00000419964 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
EPHA4-205ENST00000419964 SEMA3EO15041 775 aa11.76□□□□□ -0.53
EPHA4-205ENST00000419964 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
EPHA4-205ENST00000419964 DPYSL4O14531 572 aa11.75□□□□□ -0.53
EPHA4-205ENST00000419964 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
EPHA4-205ENST00000419964 SMYD5Q6GMV2 418 aa11.74□□□□□ -0.53
EPHA4-205ENST00000419964 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
EPHA4-205ENST00000419964 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
EPHA4-205ENST00000419964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
EPHA4-205ENST00000419964 PDIA6Q15084 440 aa11.7□□□□□ -0.54
EPHA4-205ENST00000419964 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
EPHA4-205ENST00000419964 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
EPHA4-205ENST00000419964 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
EPHA4-205ENST00000419964 UPF1Q92900 1129 aaKnown RBP eCLIP11.69□□□□□ -0.54
EPHA4-205ENST00000419964 TBC1D12O60347 775 aa11.67□□□□□ -0.54
EPHA4-205ENST00000419964 SCUBE2Q9NQ36 999 aa11.67□□□□□ -0.54
EPHA4-205ENST00000419964 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
EPHA4-205ENST00000419964 SLC34A2O95436 690 aa11.66□□□□□ -0.54
EPHA4-205ENST00000419964 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
EPHA4-205ENST00000419964 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
EPHA4-205ENST00000419964 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
EPHA4-205ENST00000419964 EEA1Q15075 1411 aa11.61□□□□□ -0.55
EPHA4-205ENST00000419964 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
EPHA4-205ENST00000419964 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
EPHA4-205ENST00000419964 EVI5O60447 810 aa11.59□□□□□ -0.55
EPHA4-205ENST00000419964 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
EPHA4-205ENST00000419964 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
EPHA4-205ENST00000419964 PTGER2P43116 358 aa11.57□□□□□ -0.56
EPHA4-205ENST00000419964 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
EPHA4-205ENST00000419964 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
EPHA4-205ENST00000419964 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
EPHA4-205ENST00000419964 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
EPHA4-205ENST00000419964 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
EPHA4-205ENST00000419964 CFTRP13569 1480 aa11.54□□□□□ -0.56
EPHA4-205ENST00000419964 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
EPHA4-205ENST00000419964 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
EPHA4-205ENST00000419964 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.57
EPHA4-205ENST00000419964 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
EPHA4-205ENST00000419964 DDX12PQ92771 950 aa11.51□□□□□ -0.57
EPHA4-205ENST00000419964 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
EPHA4-205ENST00000419964 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
EPHA4-205ENST00000419964 SNPHO15079 494 aa11.49□□□□□ -0.57
EPHA4-205ENST00000419964 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
EPHA4-205ENST00000419964 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
EPHA4-205ENST00000419964 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
EPHA4-205ENST00000419964 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
EPHA4-205ENST00000419964 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
EPHA4-205ENST00000419964 LOC105371045A0A1W2PR82 267 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms