RNA–Protein interactions for RNA: ENST00000419721.5

C1GALT1-203, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 3

Gene C1GALT1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-203ENST00000419721 EFCAB2Q5VUJ9 269 aa33.04■■■□□ 2.88
C1GALT1-203ENST00000419721 RICTORQ6R327 1708 aa33.03■■■□□ 2.88
C1GALT1-203ENST00000419721 DENND4BO75064 1496 aaPredicted RBP33.03■■■□□ 2.88
C1GALT1-203ENST00000419721 ADGRL1O94910 1474 aa33.02■■■□□ 2.88
C1GALT1-203ENST00000419721 GPATCH8Q9UKJ3 1502 aaKnown RBP32.99■■■□□ 2.87
C1GALT1-203ENST00000419721 RAPGEF3O95398 923 aa32.98■■■□□ 2.87
C1GALT1-203ENST00000419721 SUPT6HQ7KZ85 1726 aaKnown RBP32.98■■■□□ 2.87
C1GALT1-203ENST00000419721 LRRC9Q6ZRR7 1453 aa32.98■■■□□ 2.87
C1GALT1-203ENST00000419721 SCAPERQ9BY12 1400 aa32.95■■■□□ 2.87
C1GALT1-203ENST00000419721 CCNB3Q8WWL7 1395 aa32.94■■■□□ 2.86
C1GALT1-203ENST00000419721 ITSN2Q9NZM3 1697 aa32.92■■■□□ 2.86
C1GALT1-203ENST00000419721 POGZQ7Z3K3 1410 aa32.92■■■□□ 2.86
C1GALT1-203ENST00000419721 ZMYM4Q5VZL5 1548 aa32.92■■■□□ 2.86
C1GALT1-203ENST00000419721 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
C1GALT1-203ENST00000419721 ABCC1P33527 1531 aa32.91■■■□□ 2.86
C1GALT1-203ENST00000419721 SAMD9LQ8IVG5 1584 aa32.87■■■□□ 2.85
C1GALT1-203ENST00000419721 KANK4Q5T7N3 995 aaPredicted RBP32.85■■■□□ 2.85
C1GALT1-203ENST00000419721 APLP2Q06481 763 aa32.84■■■□□ 2.85
C1GALT1-203ENST00000419721 ZNF518AQ6AHZ1 1483 aa32.83■■■□□ 2.85
C1GALT1-203ENST00000419721 ARHGEF40Q8TER5 1519 aa32.82■■■□□ 2.85
C1GALT1-203ENST00000419721 ARHGEF12Q9NZN5 1544 aa32.82■■■□□ 2.84
C1GALT1-203ENST00000419721 KDM5CP41229 1560 aa32.81■■■□□ 2.84
C1GALT1-203ENST00000419721 CFDP1Q9UEE9 299 aaPredicted RBP32.81■■■□□ 2.84
C1GALT1-203ENST00000419721 MAGI2Q86UL8 1455 aa32.8■■■□□ 2.84
C1GALT1-203ENST00000419721 ZNF777Q9ULD5 760 aaPredicted RBP32.77■■■□□ 2.84
C1GALT1-203ENST00000419721 PLEKHH2Q8IVE3 1493 aa32.77■■■□□ 2.84
C1GALT1-203ENST00000419721 ZFYVE16Q7Z3T8 1539 aa32.77■■■□□ 2.84
C1GALT1-203ENST00000419721 SYCP2Q9BX26 1530 aa32.77■■■□□ 2.84
C1GALT1-203ENST00000419721 KIAA1107Q9UPP5 1409 aa32.75■■■□□ 2.83
C1GALT1-203ENST00000419721 TRAPPC8Q9Y2L5 1435 aa32.75■■■□□ 2.83
C1GALT1-203ENST00000419721 HECW2Q9P2P5 1572 aa32.73■■■□□ 2.83
C1GALT1-203ENST00000419721 YEATS2Q9ULM3 1422 aa32.72■■■□□ 2.83
C1GALT1-203ENST00000419721 AFAP1Q8N556 730 aa32.72■■■□□ 2.83
C1GALT1-203ENST00000419721 MLH3Q9UHC1 1453 aa32.67■■■□□ 2.82
C1GALT1-203ENST00000419721 KDM4FA0A1W2PPD8 638 aa32.65■■■□□ 2.82
C1GALT1-203ENST00000419721 ZNF644Q9H582 1327 aaPredicted RBP32.65■■■□□ 2.82
C1GALT1-203ENST00000419721 MYOM3Q5VTT5 1437 aa32.65■■■□□ 2.82
C1GALT1-203ENST00000419721 CAMSAP2Q08AD1 1489 aa32.65■■■□□ 2.82
C1GALT1-203ENST00000419721 HNRNPMP52272 730 aaKnown RBP eCLIP32.64■■■□□ 2.825e-7■■■■□ 25.8
C1GALT1-203ENST00000419721 MBD5Q9P267 1494 aa32.62■■■□□ 2.81
C1GALT1-203ENST00000419721 KIDINS220Q9ULH0 1771 aa32.61■■■□□ 2.81
C1GALT1-203ENST00000419721 DIP2CQ9Y2E4 1556 aa32.61■■■□□ 2.81
C1GALT1-203ENST00000419721 MIA2Q96PC5 1412 aa32.6■■■□□ 2.81
C1GALT1-203ENST00000419721 ABCA6Q8N139 1617 aa32.6■■■□□ 2.81
C1GALT1-203ENST00000419721 ATP10AO60312 1499 aa32.6■■■□□ 2.81
C1GALT1-203ENST00000419721 SIGLEC1Q9BZZ2 1709 aa32.59■■■□□ 2.81
C1GALT1-203ENST00000419721 C9orf84Q5VXU9 1444 aa32.57■■■□□ 2.8
C1GALT1-203ENST00000419721 INO80Q9ULG1 1556 aaPredicted RBP32.56■■■□□ 2.8
C1GALT1-203ENST00000419721 BCORL1Q5H9F3 1711 aa32.54■■■□□ 2.8
C1GALT1-203ENST00000419721 REREQ9P2R6 1566 aa32.54■■■□□ 2.8
C1GALT1-203ENST00000419721 MYT1LQ9UL68 1186 aa32.54■■■□□ 2.8
C1GALT1-203ENST00000419721 ARHGEF5Q12774 1597 aa32.53■■■□□ 2.8
C1GALT1-203ENST00000419721 ATP7AQ04656 1500 aa32.53■■■□□ 2.8
C1GALT1-203ENST00000419721 SPAG9O60271 1321 aaKnown RBP32.52■■■□□ 2.8
C1GALT1-203ENST00000419721 CCDC141Q6ZP82 1450 aa32.51■■■□□ 2.79
C1GALT1-203ENST00000419721 ADAMTSL3P82987 1691 aa32.5■■■□□ 2.79
C1GALT1-203ENST00000419721 ARID4BQ4LE39 1312 aaPredicted RBP32.5■■■□□ 2.79
C1GALT1-203ENST00000419721 AEBP2Q6ZN18 517 aaPredicted RBP32.49■■■□□ 2.79
C1GALT1-203ENST00000419721 RSPH4AQ5TD94 716 aa32.47■■■□□ 2.79
C1GALT1-203ENST00000419721 PTPN23Q9H3S7 1636 aa32.47■■■□□ 2.79
C1GALT1-203ENST00000419721 FGD6Q6ZV73 1430 aa32.46■■■□□ 2.79
C1GALT1-203ENST00000419721 RTEL1-TNFRSF6BF6WH68 1400 aa32.43■■■□□ 2.78
C1GALT1-203ENST00000419721 TCOF1Q13428 1488 aaKnown RBP32.42■■■□□ 2.78
C1GALT1-203ENST00000419721 AGLP35573 1532 aa32.41■■■□□ 2.78
C1GALT1-203ENST00000419721 MADDQ8WXG6 1647 aa32.4■■■□□ 2.78
C1GALT1-203ENST00000419721 ADGBQ8N7X0 1667 aa32.39■■■□□ 2.78
C1GALT1-203ENST00000419721 PLXNC1O60486 1568 aa32.36■■■□□ 2.77
C1GALT1-203ENST00000419721 MAST1Q9Y2H9 1570 aa32.36■■■□□ 2.77
C1GALT1-203ENST00000419721 A2MP01023 1474 aa32.34■■■□□ 2.77
C1GALT1-203ENST00000419721 CROCC2H7BZ55 1655 aa32.33■■■□□ 2.77
C1GALT1-203ENST00000419721 DNMT1P26358 1616 aaKnown RBP32.31■■■□□ 2.76
C1GALT1-203ENST00000419721 TSPY4P0CV99 314 aa32.31■■■□□ 2.76
C1GALT1-203ENST00000419721 TSPY10P0CW01 314 aa32.31■■■□□ 2.76
C1GALT1-203ENST00000419721 FER1L4A9Z1Z3 1794 aa32.31■■■□□ 2.76
C1GALT1-203ENST00000419721 RIMS1Q86UR5 1692 aaKnown RBP32.31■■■□□ 2.76
C1GALT1-203ENST00000419721 MLECQ14165 292 aa32.29■■■□□ 2.76
C1GALT1-203ENST00000419721 PTPRMP28827 1452 aa32.28■■■□□ 2.76
C1GALT1-203ENST00000419721 SHANK2Q9UPX8 1470 aa32.28■■■□□ 2.76
C1GALT1-203ENST00000419721 ABCC5O15440 1437 aa32.26■■■□□ 2.76
C1GALT1-203ENST00000419721 PPARGC1BQ86YN6 1023 aaKnown RBP32.26■■■□□ 2.75
C1GALT1-203ENST00000419721 DAPK1P53355 1430 aa32.26■■■□□ 2.75
C1GALT1-203ENST00000419721 DHX29Q7Z478 1369 aaKnown RBP32.22■■■□□ 2.75
C1GALT1-203ENST00000419721 FAM50AQ14320 339 aaKnown RBP32.16■■■□□ 2.74
C1GALT1-203ENST00000419721 DUOX2Q9NRD8 1548 aa32.1■■■□□ 2.73
C1GALT1-203ENST00000419721 EIF2AK4Q9P2K8 1649 aaKnown RBP32.09■■■□□ 2.73
C1GALT1-203ENST00000419721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.08■■■□□ 2.73
C1GALT1-203ENST00000419721 CNTLNQ9NXG0 1405 aa32.08■■■□□ 2.73
C1GALT1-203ENST00000419721 ADGRL2O95490 1459 aa32.07■■■□□ 2.72
C1GALT1-203ENST00000419721 KIF15Q9NS87 1388 aa32.07■■■□□ 2.72
C1GALT1-203ENST00000419721 MROH2AA6NES4 1674 aa32.06■■■□□ 2.72
C1GALT1-203ENST00000419721 RRBP1Q9P2E9 1410 aaKnown RBP32.05■■■□□ 2.72
C1GALT1-203ENST00000419721 KIF3BO15066 747 aa32.04■■■□□ 2.72
C1GALT1-203ENST00000419721 ANKRD30AQ9BXX3 1397 aa32.04■■■□□ 2.72
C1GALT1-203ENST00000419721 C3P01024 1663 aa32.03■■■□□ 2.72
C1GALT1-203ENST00000419721 GGT6Q6P531 493 aa32.03■■■□□ 2.72
C1GALT1-203ENST00000419721 ESF1Q9H501 851 aaKnown RBP32.03■■■□□ 2.72
C1GALT1-203ENST00000419721 RNF17Q9BXT8 1623 aaKnown RBP32.03■■■□□ 2.72
C1GALT1-203ENST00000419721 CLTCQ00610 1675 aaKnown RBP32.02■■■□□ 2.72
C1GALT1-203ENST00000419721 NCOA1Q15788 1441 aa32.02■■■□□ 2.72
C1GALT1-203ENST00000419721 CHIC2Q9UKJ5 165 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms