RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 PLCH2O75038 1416 aa18.92■□□□□ 0.62
THUMPD3-204ENST00000419437 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
THUMPD3-204ENST00000419437 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
THUMPD3-204ENST00000419437 YEATS2Q9ULM3 1422 aa18.9■□□□□ 0.62
THUMPD3-204ENST00000419437 CDK11AQ9UQ88 783 aaPredicted RBP18.89■□□□□ 0.61
THUMPD3-204ENST00000419437 CLIP1P30622 1438 aa18.88■□□□□ 0.61
THUMPD3-204ENST00000419437 FER1L4A9Z1Z3 1794 aa18.88■□□□□ 0.61
THUMPD3-204ENST00000419437 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
THUMPD3-204ENST00000419437 SCAPERQ9BY12 1400 aa18.87■□□□□ 0.61
THUMPD3-204ENST00000419437 KIF14Q15058 1648 aa18.85■□□□□ 0.61
THUMPD3-204ENST00000419437 ATP10AO60312 1499 aa18.84■□□□□ 0.61
THUMPD3-204ENST00000419437 EFCAB2Q5VUJ9 269 aa18.83■□□□□ 0.6
THUMPD3-204ENST00000419437 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
THUMPD3-204ENST00000419437 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
THUMPD3-204ENST00000419437 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
THUMPD3-204ENST00000419437 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
THUMPD3-204ENST00000419437 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
THUMPD3-204ENST00000419437 KDM5CP41229 1560 aa18.79■□□□□ 0.6
THUMPD3-204ENST00000419437 LRRIQ1Q96JM4 1722 aa18.79■□□□□ 0.6
THUMPD3-204ENST00000419437 PREX1Q8TCU6 1659 aa18.77■□□□□ 0.6
THUMPD3-204ENST00000419437 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.6
THUMPD3-204ENST00000419437 HSPA2P54652 639 aa18.75■□□□□ 0.59
THUMPD3-204ENST00000419437 MLECQ14165 292 aa18.75■□□□□ 0.59
THUMPD3-204ENST00000419437 REREQ9P2R6 1566 aa18.75■□□□□ 0.59
THUMPD3-204ENST00000419437 CDC42BPBQ9Y5S2 1711 aa18.74■□□□□ 0.59
THUMPD3-204ENST00000419437 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
THUMPD3-204ENST00000419437 PREX2Q70Z35 1606 aa18.72■□□□□ 0.59
THUMPD3-204ENST00000419437 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
THUMPD3-204ENST00000419437 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
THUMPD3-204ENST00000419437 SETD1BQ9UPS6 1966 aaKnown RBP18.71■□□□□ 0.59
THUMPD3-204ENST00000419437 DIP2CQ9Y2E4 1556 aa18.71■□□□□ 0.59
THUMPD3-204ENST00000419437 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
THUMPD3-204ENST00000419437 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
THUMPD3-204ENST00000419437 AFAP1Q8N556 730 aa18.69■□□□□ 0.58
THUMPD3-204ENST00000419437 ABCC1P33527 1531 aa18.68■□□□□ 0.58
THUMPD3-204ENST00000419437 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
THUMPD3-204ENST00000419437 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
THUMPD3-204ENST00000419437 AGLP35573 1532 aa18.66■□□□□ 0.58
THUMPD3-204ENST00000419437 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
THUMPD3-204ENST00000419437 STRCQ7RTU9 1775 aa18.64■□□□□ 0.57
THUMPD3-204ENST00000419437 CERKQ8TCT0 537 aa18.64■□□□□ 0.57
THUMPD3-204ENST00000419437 UHRF1BP1Q6BDS2 1440 aa18.64■□□□□ 0.57
THUMPD3-204ENST00000419437 C3P01024 1663 aa18.63■□□□□ 0.57
THUMPD3-204ENST00000419437 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
THUMPD3-204ENST00000419437 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
THUMPD3-204ENST00000419437 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
THUMPD3-204ENST00000419437 KIDINS220Q9ULH0 1771 aa18.62■□□□□ 0.57
THUMPD3-204ENST00000419437 TRAPPC8Q9Y2L5 1435 aa18.61■□□□□ 0.57
THUMPD3-204ENST00000419437 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
THUMPD3-204ENST00000419437 ZNF777Q9ULD5 760 aaPredicted RBP18.59■□□□□ 0.57
THUMPD3-204ENST00000419437 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
THUMPD3-204ENST00000419437 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
THUMPD3-204ENST00000419437 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
THUMPD3-204ENST00000419437 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
THUMPD3-204ENST00000419437 PTPRTO14522 1441 aa18.53■□□□□ 0.56
THUMPD3-204ENST00000419437 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
THUMPD3-204ENST00000419437 CCNB3Q8WWL7 1395 aa18.53■□□□□ 0.56
THUMPD3-204ENST00000419437 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
THUMPD3-204ENST00000419437 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
THUMPD3-204ENST00000419437 NPATQ14207 1427 aa18.5■□□□□ 0.55
THUMPD3-204ENST00000419437 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
THUMPD3-204ENST00000419437 KIAA1107Q9UPP5 1409 aa18.5■□□□□ 0.55
THUMPD3-204ENST00000419437 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
THUMPD3-204ENST00000419437 PLEKHH2Q8IVE3 1493 aa18.5■□□□□ 0.55
THUMPD3-204ENST00000419437 INO80Q9ULG1 1556 aaPredicted RBP18.48■□□□□ 0.55
THUMPD3-204ENST00000419437 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
THUMPD3-204ENST00000419437 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
THUMPD3-204ENST00000419437 PLXNC1O60486 1568 aa18.47■□□□□ 0.55
THUMPD3-204ENST00000419437 SUPT6HQ7KZ85 1726 aaKnown RBP18.47■□□□□ 0.55
THUMPD3-204ENST00000419437 NCOA1Q15788 1441 aa18.46■□□□□ 0.55
THUMPD3-204ENST00000419437 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
THUMPD3-204ENST00000419437 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
THUMPD3-204ENST00000419437 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
THUMPD3-204ENST00000419437 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
THUMPD3-204ENST00000419437 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
THUMPD3-204ENST00000419437 ADGBQ8N7X0 1667 aa18.43■□□□□ 0.54
THUMPD3-204ENST00000419437 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
THUMPD3-204ENST00000419437 ZNF142P52746 1687 aaPredicted RBP18.42■□□□□ 0.54
THUMPD3-204ENST00000419437 CLTCQ00610 1675 aaKnown RBP18.42■□□□□ 0.54
THUMPD3-204ENST00000419437 A2MP01023 1474 aa18.42■□□□□ 0.54
THUMPD3-204ENST00000419437 APLP2Q06481 763 aa18.42■□□□□ 0.54
THUMPD3-204ENST00000419437 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
THUMPD3-204ENST00000419437 TIAM1Q13009 1591 aa18.4■□□□□ 0.54
THUMPD3-204ENST00000419437 MYO3AQ8NEV4 1616 aa18.39■□□□□ 0.53
THUMPD3-204ENST00000419437 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
THUMPD3-204ENST00000419437 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
THUMPD3-204ENST00000419437 PLA2R1Q13018 1463 aa18.37■□□□□ 0.53
THUMPD3-204ENST00000419437 LRRC9Q6ZRR7 1453 aa18.37■□□□□ 0.53
THUMPD3-204ENST00000419437 CEP170BQ9Y4F5 1589 aaPredicted RBP18.35■□□□□ 0.53
THUMPD3-204ENST00000419437 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
THUMPD3-204ENST00000419437 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
THUMPD3-204ENST00000419437 RTEL1-TNFRSF6BF6WH68 1400 aa18.34■□□□□ 0.53
THUMPD3-204ENST00000419437 PKD2Q13563 968 aa18.32■□□□□ 0.52
THUMPD3-204ENST00000419437 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
THUMPD3-204ENST00000419437 TCOF1Q13428 1488 aaKnown RBP18.32■□□□□ 0.52
THUMPD3-204ENST00000419437 GGT6Q6P531 493 aa18.31■□□□□ 0.52
THUMPD3-204ENST00000419437 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
THUMPD3-204ENST00000419437 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
THUMPD3-204ENST00000419437 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
THUMPD3-204ENST00000419437 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms