RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
LINC00963-202ENST00000419300 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-202ENST00000419300 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
LINC00963-202ENST00000419300 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00963-202ENST00000419300 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
LINC00963-202ENST00000419300 CSPP1Q1MSJ5 1256 aa12.72□□□□□ -0.37
LINC00963-202ENST00000419300 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
LINC00963-202ENST00000419300 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
LINC00963-202ENST00000419300 CUX2O14529 1486 aa12.72□□□□□ -0.37
LINC00963-202ENST00000419300 KIF15Q9NS87 1388 aa12.71□□□□□ -0.37
LINC00963-202ENST00000419300 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.37
LINC00963-202ENST00000419300 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
LINC00963-202ENST00000419300 SOGA1O94964 1423 aa12.7□□□□□ -0.38
LINC00963-202ENST00000419300 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
LINC00963-202ENST00000419300 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
LINC00963-202ENST00000419300 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
LINC00963-202ENST00000419300 DRC7Q8IY82 874 aa12.68□□□□□ -0.38
LINC00963-202ENST00000419300 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-202ENST00000419300 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
LINC00963-202ENST00000419300 RWDD1Q9H446 243 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-202ENST00000419300 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-202ENST00000419300 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-202ENST00000419300 CARMIL1Q5VZK9 1371 aa12.66□□□□□ -0.38
LINC00963-202ENST00000419300 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
LINC00963-202ENST00000419300 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
LINC00963-202ENST00000419300 TPM4P67936 248 aa12.63□□□□□ -0.39
LINC00963-202ENST00000419300 FGD1P98174 961 aa12.63□□□□□ -0.39
LINC00963-202ENST00000419300 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
LINC00963-202ENST00000419300 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-202ENST00000419300 KCNJ4P48050 445 aa12.62□□□□□ -0.39
LINC00963-202ENST00000419300 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
LINC00963-202ENST00000419300 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
LINC00963-202ENST00000419300 CCDC34Q96HJ3 373 aa12.61□□□□□ -0.39
LINC00963-202ENST00000419300 ANKRD30AQ9BXX3 1397 aa12.61□□□□□ -0.39
LINC00963-202ENST00000419300 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
LINC00963-202ENST00000419300 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
LINC00963-202ENST00000419300 MTERF4Q7Z6M4 381 aaKnown RBP12.61□□□□□ -0.39
LINC00963-202ENST00000419300 CENPQQ7L2Z9 268 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-202ENST00000419300 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
LINC00963-202ENST00000419300 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
LINC00963-202ENST00000419300 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
LINC00963-202ENST00000419300 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
LINC00963-202ENST00000419300 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-202ENST00000419300 GSE1Q14687 1217 aa12.59□□□□□ -0.39
LINC00963-202ENST00000419300 CC2D1BQ5T0F9 858 aaKnown RBP12.59□□□□□ -0.39
LINC00963-202ENST00000419300 KIF16BQ96L93 1317 aa12.59□□□□□ -0.39
LINC00963-202ENST00000419300 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
LINC00963-202ENST00000419300 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
LINC00963-202ENST00000419300 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
LINC00963-202ENST00000419300 AAMPQ13685 434 aa12.58□□□□□ -0.4
LINC00963-202ENST00000419300 TNNT3P45378 269 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-202ENST00000419300 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
LINC00963-202ENST00000419300 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
LINC00963-202ENST00000419300 CTTNBP2Q8WZ74 1663 aa12.57□□□□□ -0.4
LINC00963-202ENST00000419300 ST18O60284 1047 aa12.57□□□□□ -0.4
LINC00963-202ENST00000419300 NLRP13Q86W25 1043 aa12.57□□□□□ -0.4
LINC00963-202ENST00000419300 NGEFQ8N5V2 710 aa12.56□□□□□ -0.4
LINC00963-202ENST00000419300 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
LINC00963-202ENST00000419300 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
LINC00963-202ENST00000419300 CUL7Q14999 1698 aa12.56□□□□□ -0.4
LINC00963-202ENST00000419300 ATP6V1DQ9Y5K8 247 aa12.56□□□□□ -0.4
LINC00963-202ENST00000419300 SETQ01105 290 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-202ENST00000419300 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
LINC00963-202ENST00000419300 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
LINC00963-202ENST00000419300 FAM161AQ3B820 660 aa12.55□□□□□ -0.4
LINC00963-202ENST00000419300 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-202ENST00000419300 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
LINC00963-202ENST00000419300 DHX57Q6P158 1386 aaKnown RBP12.54□□□□□ -0.4
LINC00963-202ENST00000419300 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
LINC00963-202ENST00000419300 HMMRO75330 724 aa12.53□□□□□ -0.4
LINC00963-202ENST00000419300 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
LINC00963-202ENST00000419300 DCAF11Q8TEB1 546 aa12.53□□□□□ -0.4
LINC00963-202ENST00000419300 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
LINC00963-202ENST00000419300 MAP7D2Q96T17 732 aa12.53□□□□□ -0.4
LINC00963-202ENST00000419300 KIF3AQ9Y496 699 aa12.52□□□□□ -0.41
LINC00963-202ENST00000419300 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
LINC00963-202ENST00000419300 ITSN2Q9NZM3 1697 aa12.52□□□□□ -0.41
LINC00963-202ENST00000419300 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
LINC00963-202ENST00000419300 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
LINC00963-202ENST00000419300 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-202ENST00000419300 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
LINC00963-202ENST00000419300 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-202ENST00000419300 POGKQ9P215 609 aa12.5□□□□□ -0.41
LINC00963-202ENST00000419300 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-202ENST00000419300 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
LINC00963-202ENST00000419300 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
LINC00963-202ENST00000419300 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-202ENST00000419300 CNTLNQ9NXG0 1405 aa12.49□□□□□ -0.41
LINC00963-202ENST00000419300 LMOD3Q0VAK6 560 aa12.49□□□□□ -0.41
LINC00963-202ENST00000419300 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
LINC00963-202ENST00000419300 GPS2Q13227 327 aa12.49□□□□□ -0.41
LINC00963-202ENST00000419300 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
LINC00963-202ENST00000419300 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
LINC00963-202ENST00000419300 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
LINC00963-202ENST00000419300 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
LINC00963-202ENST00000419300 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
LINC00963-202ENST00000419300 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-202ENST00000419300 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
LINC00963-202ENST00000419300 USP47Q96K76 1375 aa12.47□□□□□ -0.41
LINC00963-202ENST00000419300 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms