RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 ADGRL1O94910 1474 aa31.01■■■□□ 2.56
RPUSD3-202ENST00000418713 RAPGEF3O95398 923 aa31■■■□□ 2.55
RPUSD3-202ENST00000418713 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
RPUSD3-202ENST00000418713 CFDP1Q9UEE9 299 aaPredicted RBP31■■■□□ 2.55
RPUSD3-202ENST00000418713 SCAPERQ9BY12 1400 aa30.99■■■□□ 2.55
RPUSD3-202ENST00000418713 LRRC9Q6ZRR7 1453 aa30.99■■■□□ 2.55
RPUSD3-202ENST00000418713 PREX2Q70Z35 1606 aa30.98■■■□□ 2.55
RPUSD3-202ENST00000418713 GPATCH8Q9UKJ3 1502 aaKnown RBP30.97■■■□□ 2.55
RPUSD3-202ENST00000418713 SUPT6HQ7KZ85 1726 aaKnown RBP30.96■■■□□ 2.55
RPUSD3-202ENST00000418713 CDC42BPBQ9Y5S2 1711 aa30.95■■■□□ 2.54
RPUSD3-202ENST00000418713 CDC42BPAQ5VT25 1732 aa30.93■■■□□ 2.54
RPUSD3-202ENST00000418713 ZNF777Q9ULD5 760 aaPredicted RBP30.93■■■□□ 2.54
RPUSD3-202ENST00000418713 NCOA2Q15596 1464 aa30.9■■■□□ 2.54
RPUSD3-202ENST00000418713 KANK4Q5T7N3 995 aaPredicted RBP30.9■■■□□ 2.54
RPUSD3-202ENST00000418713 PLEKHH2Q8IVE3 1493 aa30.89■■■□□ 2.54
RPUSD3-202ENST00000418713 ITSN2Q9NZM3 1697 aa30.87■■■□□ 2.53
RPUSD3-202ENST00000418713 MAGI2Q86UL8 1455 aa30.87■■■□□ 2.53
RPUSD3-202ENST00000418713 POGZQ7Z3K3 1410 aa30.86■■■□□ 2.53
RPUSD3-202ENST00000418713 ZNF518AQ6AHZ1 1483 aa30.86■■■□□ 2.53
RPUSD3-202ENST00000418713 RICTORQ6R327 1708 aa30.84■■■□□ 2.53
RPUSD3-202ENST00000418713 KIAA1107Q9UPP5 1409 aa30.83■■■□□ 2.53
RPUSD3-202ENST00000418713 MYT1LQ9UL68 1186 aa30.82■■■□□ 2.52
RPUSD3-202ENST00000418713 ZMYM4Q5VZL5 1548 aa30.8■■■□□ 2.52
RPUSD3-202ENST00000418713 RSPH4AQ5TD94 716 aa30.8■■■□□ 2.52
RPUSD3-202ENST00000418713 FRMPD1Q5SYB0 1578 aa30.79■■■□□ 2.52
RPUSD3-202ENST00000418713 AFAP1Q8N556 730 aa30.79■■■□□ 2.52
RPUSD3-202ENST00000418713 ABCC1P33527 1531 aa30.78■■■□□ 2.52
RPUSD3-202ENST00000418713 HNRNPMP52272 730 aaKnown RBP eCLIP30.74■■■□□ 2.51
RPUSD3-202ENST00000418713 SAMD9LQ8IVG5 1584 aa30.74■■■□□ 2.51
RPUSD3-202ENST00000418713 MIA2Q96PC5 1412 aa30.73■■■□□ 2.51
RPUSD3-202ENST00000418713 ZFYVE16Q7Z3T8 1539 aa30.72■■■□□ 2.51
RPUSD3-202ENST00000418713 MYOM3Q5VTT5 1437 aa30.71■■■□□ 2.51
RPUSD3-202ENST00000418713 TRAPPC8Q9Y2L5 1435 aa30.7■■■□□ 2.5
RPUSD3-202ENST00000418713 KDM5CP41229 1560 aa30.7■■■□□ 2.5
RPUSD3-202ENST00000418713 MLH3Q9UHC1 1453 aa30.7■■■□□ 2.5
RPUSD3-202ENST00000418713 ARHGEF12Q9NZN5 1544 aa30.69■■■□□ 2.5
RPUSD3-202ENST00000418713 ARID4BQ4LE39 1312 aaPredicted RBP30.69■■■□□ 2.5
RPUSD3-202ENST00000418713 SPAG9O60271 1321 aaKnown RBP30.68■■■□□ 2.5
RPUSD3-202ENST00000418713 SYCP2Q9BX26 1530 aa30.68■■■□□ 2.5
RPUSD3-202ENST00000418713 ZNF644Q9H582 1327 aaPredicted RBP30.67■■■□□ 2.5
RPUSD3-202ENST00000418713 ARHGEF40Q8TER5 1519 aa30.67■■■□□ 2.5
RPUSD3-202ENST00000418713 ATP10AO60312 1499 aa30.65■■■□□ 2.5
RPUSD3-202ENST00000418713 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
RPUSD3-202ENST00000418713 TSPY4P0CV99 314 aa30.63■■■□□ 2.49
RPUSD3-202ENST00000418713 TSPY10P0CW01 314 aa30.63■■■□□ 2.49
RPUSD3-202ENST00000418713 YEATS2Q9ULM3 1422 aa30.62■■■□□ 2.49
RPUSD3-202ENST00000418713 CAMSAP2Q08AD1 1489 aa30.62■■■□□ 2.49
RPUSD3-202ENST00000418713 KDM4FA0A1W2PPD8 638 aa30.6■■■□□ 2.49
RPUSD3-202ENST00000418713 C9orf84Q5VXU9 1444 aa30.6■■■□□ 2.49
RPUSD3-202ENST00000418713 MBD5Q9P267 1494 aa30.59■■■□□ 2.49
RPUSD3-202ENST00000418713 RTEL1-TNFRSF6BF6WH68 1400 aa30.56■■■□□ 2.48
RPUSD3-202ENST00000418713 CCDC141Q6ZP82 1450 aa30.55■■■□□ 2.48
RPUSD3-202ENST00000418713 ARHGEF5Q12774 1597 aa30.52■■■□□ 2.48
RPUSD3-202ENST00000418713 FGD6Q6ZV73 1430 aa30.51■■■□□ 2.47
RPUSD3-202ENST00000418713 KIDINS220Q9ULH0 1771 aa30.49■■■□□ 2.47
RPUSD3-202ENST00000418713 ATP7AQ04656 1500 aa30.49■■■□□ 2.47
RPUSD3-202ENST00000418713 REREQ9P2R6 1566 aa30.48■■■□□ 2.47
RPUSD3-202ENST00000418713 DIP2CQ9Y2E4 1556 aa30.47■■■□□ 2.47
RPUSD3-202ENST00000418713 PTPN23Q9H3S7 1636 aa30.46■■■□□ 2.47
RPUSD3-202ENST00000418713 INO80Q9ULG1 1556 aaPredicted RBP30.43■■■□□ 2.46
RPUSD3-202ENST00000418713 ABCA6Q8N139 1617 aa30.43■■■□□ 2.46
RPUSD3-202ENST00000418713 TCOF1Q13428 1488 aaKnown RBP30.43■■■□□ 2.46
RPUSD3-202ENST00000418713 BCORL1Q5H9F3 1711 aa30.42■■■□□ 2.46
RPUSD3-202ENST00000418713 AGLP35573 1532 aa30.41■■■□□ 2.46
RPUSD3-202ENST00000418713 MLECQ14165 292 aa30.4■■■□□ 2.46
RPUSD3-202ENST00000418713 FAM50AQ14320 339 aaKnown RBP30.4■■■□□ 2.46
RPUSD3-202ENST00000418713 PPARGC1BQ86YN6 1023 aaKnown RBP30.39■■■□□ 2.46
RPUSD3-202ENST00000418713 ESF1Q9H501 851 aaKnown RBP30.39■■■□□ 2.46
RPUSD3-202ENST00000418713 A2MP01023 1474 aa30.38■■■□□ 2.45
RPUSD3-202ENST00000418713 ADAMTSL3P82987 1691 aa30.36■■■□□ 2.45
RPUSD3-202ENST00000418713 ADGBQ8N7X0 1667 aa30.36■■■□□ 2.45
RPUSD3-202ENST00000418713 DHX29Q7Z478 1369 aaKnown RBP30.35■■■□□ 2.45
RPUSD3-202ENST00000418713 MAST1Q9Y2H9 1570 aa30.33■■■□□ 2.45
RPUSD3-202ENST00000418713 PPP6R1Q9UPN7 881 aa30.33■■■□□ 2.45
RPUSD3-202ENST00000418713 SHANK2Q9UPX8 1470 aa30.31■■■□□ 2.44
RPUSD3-202ENST00000418713 ABCC5O15440 1437 aa30.3■■■□□ 2.44
RPUSD3-202ENST00000418713 DAPK1P53355 1430 aa30.3■■■□□ 2.44
RPUSD3-202ENST00000418713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.28■■■□□ 2.44
RPUSD3-202ENST00000418713 DNMT1P26358 1616 aaKnown RBP30.28■■■□□ 2.44
RPUSD3-202ENST00000418713 SIGLEC1Q9BZZ2 1709 aa30.26■■■□□ 2.43
RPUSD3-202ENST00000418713 ANKRD30AQ9BXX3 1397 aa30.26■■■□□ 2.43
RPUSD3-202ENST00000418713 PLXNC1O60486 1568 aa30.24■■■□□ 2.43
RPUSD3-202ENST00000418713 MADDQ8WXG6 1647 aa30.24■■■□□ 2.43
RPUSD3-202ENST00000418713 PTPRMP28827 1452 aa30.24■■■□□ 2.43
RPUSD3-202ENST00000418713 GGT6Q6P531 493 aa30.23■■■□□ 2.43
RPUSD3-202ENST00000418713 CNTLNQ9NXG0 1405 aa30.22■■■□□ 2.43
RPUSD3-202ENST00000418713 KIF3BO15066 747 aa30.22■■■□□ 2.43
RPUSD3-202ENST00000418713 FER1L4A9Z1Z3 1794 aa30.2■■■□□ 2.42
RPUSD3-202ENST00000418713 CROCC2H7BZ55 1655 aa30.2■■■□□ 2.42
RPUSD3-202ENST00000418713 CHIC2Q9UKJ5 165 aa30.19■■■□□ 2.42
RPUSD3-202ENST00000418713 RRP7BPQ9NSQ0 103 aa30.18■■■□□ 2.42
RPUSD3-202ENST00000418713 RIMS1Q86UR5 1692 aaKnown RBP30.17■■■□□ 2.42
RPUSD3-202ENST00000418713 DUOX2Q9NRD8 1548 aa30.17■■■□□ 2.42
RPUSD3-202ENST00000418713 KIF15Q9NS87 1388 aa30.16■■■□□ 2.42
RPUSD3-202ENST00000418713 RRBP1Q9P2E9 1410 aaKnown RBP30.14■■■□□ 2.42
RPUSD3-202ENST00000418713 NCOA1Q15788 1441 aa30.13■■■□□ 2.41
RPUSD3-202ENST00000418713 ERBINQ96RT1 1412 aa30.11■■■□□ 2.41
RPUSD3-202ENST00000418713 ADGRL2O95490 1459 aa30.11■■■□□ 2.41
RPUSD3-202ENST00000418713 PLPPR3Q6T4P5 718 aa30.09■■■□□ 2.41
RPUSD3-202ENST00000418713 EIF2AK4Q9P2K8 1649 aaKnown RBP30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms