RNA–Protein interactions for RNA: ENST00000417903.5

NDUFA3-205, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-205ENST00000417903 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
NDUFA3-205ENST00000417903 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
NDUFA3-205ENST00000417903 GPATCH8Q9UKJ3 1502 aaKnown RBP23.9■■□□□ 1.42
NDUFA3-205ENST00000417903 POGZQ7Z3K3 1410 aa23.9■■□□□ 1.42
NDUFA3-205ENST00000417903 FRMPD1Q5SYB0 1578 aa23.9■■□□□ 1.42
NDUFA3-205ENST00000417903 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.41
NDUFA3-205ENST00000417903 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.41
NDUFA3-205ENST00000417903 APLP2Q06481 763 aa23.88■■□□□ 1.41
NDUFA3-205ENST00000417903 MAGI2Q86UL8 1455 aa23.87■■□□□ 1.41
NDUFA3-205ENST00000417903 AFAP1Q8N556 730 aa23.87■■□□□ 1.41
NDUFA3-205ENST00000417903 PREX2Q70Z35 1606 aa23.86■■□□□ 1.41
NDUFA3-205ENST00000417903 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
NDUFA3-205ENST00000417903 RICTORQ6R327 1708 aa23.85■■□□□ 1.41
NDUFA3-205ENST00000417903 CDC42BPBQ9Y5S2 1711 aa23.85■■□□□ 1.41
NDUFA3-205ENST00000417903 TIAM1Q13009 1591 aa23.85■■□□□ 1.41
NDUFA3-205ENST00000417903 ZMYM4Q5VZL5 1548 aa23.84■■□□□ 1.41
NDUFA3-205ENST00000417903 ZNF518AQ6AHZ1 1483 aa23.83■■□□□ 1.41
NDUFA3-205ENST00000417903 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
NDUFA3-205ENST00000417903 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
NDUFA3-205ENST00000417903 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
NDUFA3-205ENST00000417903 CDC42BPAQ5VT25 1732 aa23.81■■□□□ 1.4
NDUFA3-205ENST00000417903 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
NDUFA3-205ENST00000417903 YEATS2Q9ULM3 1422 aa23.79■■□□□ 1.4
NDUFA3-205ENST00000417903 KIAA1107Q9UPP5 1409 aa23.78■■□□□ 1.4
NDUFA3-205ENST00000417903 HNRNPMP52272 730 aaKnown RBP eCLIP23.78■■□□□ 1.4
NDUFA3-205ENST00000417903 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
NDUFA3-205ENST00000417903 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
NDUFA3-205ENST00000417903 ZFYVE16Q7Z3T8 1539 aa23.78■■□□□ 1.4
NDUFA3-205ENST00000417903 ARHGEF12Q9NZN5 1544 aa23.78■■□□□ 1.4
NDUFA3-205ENST00000417903 TRAPPC8Q9Y2L5 1435 aa23.77■■□□□ 1.4
NDUFA3-205ENST00000417903 ABCC1P33527 1531 aa23.77■■□□□ 1.4
NDUFA3-205ENST00000417903 ARHGEF40Q8TER5 1519 aa23.75■■□□□ 1.39
NDUFA3-205ENST00000417903 ATP10AO60312 1499 aa23.74■■□□□ 1.39
NDUFA3-205ENST00000417903 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
NDUFA3-205ENST00000417903 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
NDUFA3-205ENST00000417903 MLH3Q9UHC1 1453 aa23.73■■□□□ 1.39
NDUFA3-205ENST00000417903 KDM5CP41229 1560 aa23.73■■□□□ 1.39
NDUFA3-205ENST00000417903 SAMD9LQ8IVG5 1584 aa23.72■■□□□ 1.39
NDUFA3-205ENST00000417903 SPAG9O60271 1321 aaKnown RBP23.71■■□□□ 1.39
NDUFA3-205ENST00000417903 RSPH4AQ5TD94 716 aa23.68■■□□□ 1.38
NDUFA3-205ENST00000417903 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
NDUFA3-205ENST00000417903 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
NDUFA3-205ENST00000417903 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
NDUFA3-205ENST00000417903 HECW2Q9P2P5 1572 aa23.65■■□□□ 1.38
NDUFA3-205ENST00000417903 MBD5Q9P267 1494 aa23.63■■□□□ 1.37
NDUFA3-205ENST00000417903 MLECQ14165 292 aa23.62■■□□□ 1.37
NDUFA3-205ENST00000417903 MYOM3Q5VTT5 1437 aa23.6■■□□□ 1.37
NDUFA3-205ENST00000417903 MIA2Q96PC5 1412 aa23.6■■□□□ 1.37
NDUFA3-205ENST00000417903 ADAMTSL3P82987 1691 aa23.59■■□□□ 1.37
NDUFA3-205ENST00000417903 BCORL1Q5H9F3 1711 aa23.59■■□□□ 1.37
NDUFA3-205ENST00000417903 DIP2CQ9Y2E4 1556 aa23.58■■□□□ 1.37
NDUFA3-205ENST00000417903 CAMSAP2Q08AD1 1489 aa23.58■■□□□ 1.37
NDUFA3-205ENST00000417903 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
NDUFA3-205ENST00000417903 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
NDUFA3-205ENST00000417903 REREQ9P2R6 1566 aa23.56■■□□□ 1.36
NDUFA3-205ENST00000417903 RTEL1-TNFRSF6BF6WH68 1400 aa23.55■■□□□ 1.36
NDUFA3-205ENST00000417903 PTPRMP28827 1452 aa23.55■■□□□ 1.36
NDUFA3-205ENST00000417903 KIDINS220Q9ULH0 1771 aa23.55■■□□□ 1.36
NDUFA3-205ENST00000417903 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
NDUFA3-205ENST00000417903 ABCA6Q8N139 1617 aa23.53■■□□□ 1.36
NDUFA3-205ENST00000417903 CCDC141Q6ZP82 1450 aa23.53■■□□□ 1.36
NDUFA3-205ENST00000417903 SIGLEC1Q9BZZ2 1709 aa23.52■■□□□ 1.36
NDUFA3-205ENST00000417903 AGLP35573 1532 aa23.52■■□□□ 1.36
NDUFA3-205ENST00000417903 MADDQ8WXG6 1647 aa23.49■■□□□ 1.35
NDUFA3-205ENST00000417903 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
NDUFA3-205ENST00000417903 ESF1Q9H501 851 aaKnown RBP23.48■■□□□ 1.35
NDUFA3-205ENST00000417903 A2MP01023 1474 aa23.48■■□□□ 1.35
NDUFA3-205ENST00000417903 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
NDUFA3-205ENST00000417903 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
NDUFA3-205ENST00000417903 DHX29Q7Z478 1369 aaKnown RBP23.45■■□□□ 1.34
NDUFA3-205ENST00000417903 PLPPR3Q6T4P5 718 aa23.42■■□□□ 1.34
NDUFA3-205ENST00000417903 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
NDUFA3-205ENST00000417903 GGT6Q6P531 493 aa23.4■■□□□ 1.34
NDUFA3-205ENST00000417903 RIMS1Q86UR5 1692 aaKnown RBP23.4■■□□□ 1.34
NDUFA3-205ENST00000417903 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
NDUFA3-205ENST00000417903 PTPN23Q9H3S7 1636 aa23.38■■□□□ 1.33
NDUFA3-205ENST00000417903 PLXNC1O60486 1568 aa23.37■■□□□ 1.33
NDUFA3-205ENST00000417903 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
NDUFA3-205ENST00000417903 CEBPAP49715 358 aaPredicted RBP23.37■■□□□ 1.33
NDUFA3-205ENST00000417903 ABCC5O15440 1437 aa23.36■■□□□ 1.33
NDUFA3-205ENST00000417903 ADGBQ8N7X0 1667 aa23.36■■□□□ 1.33
NDUFA3-205ENST00000417903 KIF3BO15066 747 aa23.36■■□□□ 1.33
NDUFA3-205ENST00000417903 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
NDUFA3-205ENST00000417903 FER1L4A9Z1Z3 1794 aa23.35■■□□□ 1.33
NDUFA3-205ENST00000417903 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
NDUFA3-205ENST00000417903 MAST1Q9Y2H9 1570 aa23.34■■□□□ 1.33
NDUFA3-205ENST00000417903 DAPK1P53355 1430 aa23.32■■□□□ 1.32
NDUFA3-205ENST00000417903 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
NDUFA3-205ENST00000417903 ZMYM3Q14202 1370 aa23.29■■□□□ 1.32
NDUFA3-205ENST00000417903 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
NDUFA3-205ENST00000417903 CHIC2Q9UKJ5 165 aa23.28■■□□□ 1.32
NDUFA3-205ENST00000417903 ANKRD30AQ9BXX3 1397 aa23.26■■□□□ 1.31
NDUFA3-205ENST00000417903 KIF15Q9NS87 1388 aa23.26■■□□□ 1.31
NDUFA3-205ENST00000417903 WASHC2CQ9Y4E1 1318 aa23.25■■□□□ 1.31
NDUFA3-205ENST00000417903 DNMT1P26358 1616 aaKnown RBP23.25■■□□□ 1.31
NDUFA3-205ENST00000417903 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
NDUFA3-205ENST00000417903 LMTK3Q96Q04 1460 aa23.22■■□□□ 1.31
NDUFA3-205ENST00000417903 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
NDUFA3-205ENST00000417903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.19■■□□□ 1.32e-6■■■■□ 19.8
NDUFA3-205ENST00000417903 NPATQ14207 1427 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms