RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ABCC2Q92887 1545 aa10.12□□□□□ -0.79
ECHDC1-206ENST00000417628 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
ECHDC1-206ENST00000417628 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-206ENST00000417628 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-206ENST00000417628 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-206ENST00000417628 EPRSP07814 1512 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-206ENST00000417628 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-206ENST00000417628 MADDQ8WXG6 1647 aa10.09□□□□□ -0.79
ECHDC1-206ENST00000417628 MED1Q15648 1581 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-206ENST00000417628 IQSEC2Q5JU85 1478 aa10.06□□□□□ -0.8
ECHDC1-206ENST00000417628 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
ECHDC1-206ENST00000417628 BCORL1Q5H9F3 1711 aa10.05□□□□□ -0.8
ECHDC1-206ENST00000417628 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-206ENST00000417628 CUL7Q14999 1698 aa10.04□□□□□ -0.8
ECHDC1-206ENST00000417628 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.04□□□□□ -0.8
ECHDC1-206ENST00000417628 RIMS1Q86UR5 1692 aaKnown RBP10.02□□□□□ -0.8
ECHDC1-206ENST00000417628 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.8
ECHDC1-206ENST00000417628 PTPRGP23470 1445 aa10.02□□□□□ -0.81
ECHDC1-206ENST00000417628 NUBP1P53384 320 aa10.02□□□□□ -0.81
ECHDC1-206ENST00000417628 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-206ENST00000417628 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
ECHDC1-206ENST00000417628 MAGI3Q5TCQ9 1506 aa10.01□□□□□ -0.81
ECHDC1-206ENST00000417628 YEATS2Q9ULM3 1422 aa10□□□□□ -0.81
ECHDC1-206ENST00000417628 UHRF1BP1LA0JNW5 1464 aa10□□□□□ -0.81
ECHDC1-206ENST00000417628 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-206ENST00000417628 CREBZFQ9NS37 354 aa9.99□□□□□ -0.81
ECHDC1-206ENST00000417628 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
ECHDC1-206ENST00000417628 CHGAP10645 457 aaKnown RBP9.97□□□□□ -0.81
ECHDC1-206ENST00000417628 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-206ENST00000417628 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
ECHDC1-206ENST00000417628 LTBP4Q8N2S1 1624 aa9.96□□□□□ -0.81
ECHDC1-206ENST00000417628 CFAP43Q8NDM7 1665 aa9.96□□□□□ -0.81
ECHDC1-206ENST00000417628 GSE1Q14687 1217 aa9.96□□□□□ -0.82
ECHDC1-206ENST00000417628 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-206ENST00000417628 KDM2AQ9Y2K7 1162 aa9.96□□□□□ -0.82
ECHDC1-206ENST00000417628 ARID4BQ4LE39 1312 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-206ENST00000417628 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
ECHDC1-206ENST00000417628 TTBK1Q5TCY1 1321 aaPredicted RBP9.95□□□□□ -0.82
ECHDC1-206ENST00000417628 CD109Q6YHK3 1445 aa9.95□□□□□ -0.82
ECHDC1-206ENST00000417628 ARAP3Q8WWN8 1544 aa9.95□□□□□ -0.82
ECHDC1-206ENST00000417628 KDM5BQ9UGL1 1544 aa9.95□□□□□ -0.82
ECHDC1-206ENST00000417628 WDR7Q9Y4E6 1490 aa9.94□□□□□ -0.82
ECHDC1-206ENST00000417628 TNIKQ9UKE5 1360 aa9.94□□□□□ -0.82
ECHDC1-206ENST00000417628 PTPRTO14522 1441 aa9.93□□□□□ -0.82
ECHDC1-206ENST00000417628 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
ECHDC1-206ENST00000417628 UACAQ9BZF9 1416 aa9.93□□□□□ -0.82
ECHDC1-206ENST00000417628 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
ECHDC1-206ENST00000417628 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
ECHDC1-206ENST00000417628 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
ECHDC1-206ENST00000417628 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
ECHDC1-206ENST00000417628 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
ECHDC1-206ENST00000417628 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
ECHDC1-206ENST00000417628 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
ECHDC1-206ENST00000417628 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
ECHDC1-206ENST00000417628 CARMIL2Q6F5E8 1435 aa9.89□□□□□ -0.83
ECHDC1-206ENST00000417628 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
ECHDC1-206ENST00000417628 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
ECHDC1-206ENST00000417628 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
ECHDC1-206ENST00000417628 TTC37Q6PGP7 1564 aa9.86□□□□□ -0.83
ECHDC1-206ENST00000417628 POGZQ7Z3K3 1410 aa9.86□□□□□ -0.83
ECHDC1-206ENST00000417628 BCANQ96GW7 911 aa9.86□□□□□ -0.83
ECHDC1-206ENST00000417628 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
ECHDC1-206ENST00000417628 HSPA1LP34931 641 aa9.85□□□□□ -0.83
ECHDC1-206ENST00000417628 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
ECHDC1-206ENST00000417628 FANCAO15360 1455 aa9.84□□□□□ -0.83
ECHDC1-206ENST00000417628 CHRM1P11229 460 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-206ENST00000417628 PHLDB1Q86UU1 1377 aa9.83□□□□□ -0.84
ECHDC1-206ENST00000417628 UHRF1BP1Q6BDS2 1440 aa9.82□□□□□ -0.84
ECHDC1-206ENST00000417628 FRMPD1Q5SYB0 1578 aa9.82□□□□□ -0.84
ECHDC1-206ENST00000417628 RAPGEF3O95398 923 aa9.81□□□□□ -0.84
ECHDC1-206ENST00000417628 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
ECHDC1-206ENST00000417628 FER1L4A9Z1Z3 1794 aa9.8□□□□□ -0.84
ECHDC1-206ENST00000417628 KCNH8Q96L42 1107 aa9.78□□□□□ -0.84
ECHDC1-206ENST00000417628 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
ECHDC1-206ENST00000417628 TAOK2Q9UL54 1235 aa9.77□□□□□ -0.85
ECHDC1-206ENST00000417628 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
ECHDC1-206ENST00000417628 AKNAQ7Z591 1439 aa9.75□□□□□ -0.85
ECHDC1-206ENST00000417628 NEO1Q92859 1461 aa9.75□□□□□ -0.85
ECHDC1-206ENST00000417628 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-206ENST00000417628 PYGBP11216 843 aa9.75□□□□□ -0.85
ECHDC1-206ENST00000417628 PIP4K2BP78356 416 aa9.75□□□□□ -0.85
ECHDC1-206ENST00000417628 NCOA1Q15788 1441 aa9.74□□□□□ -0.85
ECHDC1-206ENST00000417628 DISP1Q96F81 1524 aa9.74□□□□□ -0.85
ECHDC1-206ENST00000417628 STK25O00506 426 aa9.74□□□□□ -0.85
ECHDC1-206ENST00000417628 SGIP1Q9BQI5 828 aa9.74□□□□□ -0.85
ECHDC1-206ENST00000417628 RGS17Q9UGC6 210 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-206ENST00000417628 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-206ENST00000417628 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
ECHDC1-206ENST00000417628 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
ECHDC1-206ENST00000417628 KIAA0556O60303 1618 aa9.73□□□□□ -0.85
ECHDC1-206ENST00000417628 ARHGEF12Q9NZN5 1544 aa9.72□□□□□ -0.85
ECHDC1-206ENST00000417628 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-206ENST00000417628 MLECQ14165 292 aa9.72□□□□□ -0.85
ECHDC1-206ENST00000417628 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
ECHDC1-206ENST00000417628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.71□□□□□ -0.86
ECHDC1-206ENST00000417628 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
ECHDC1-206ENST00000417628 TOM1O60784 492 aa9.7□□□□□ -0.86
ECHDC1-206ENST00000417628 CEBPAP49715 358 aaPredicted RBP9.7□□□□□ -0.86
ECHDC1-206ENST00000417628 ZFYVE16Q7Z3T8 1539 aa9.7□□□□□ -0.86
ECHDC1-206ENST00000417628 EFCAB5A4FU69 1503 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms