RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 MAGI2Q86UL8 1455 aa26.1■■□□□ 1.77
DDR1-231ENST00000417521 MYO5CQ9NQX4 1742 aa26.09■■□□□ 1.77
DDR1-231ENST00000417521 MTUS2Q5JR59 1369 aa26.09■■□□□ 1.77
DDR1-231ENST00000417521 ZMYM4Q5VZL5 1548 aa26.08■■□□□ 1.76
DDR1-231ENST00000417521 RICTORQ6R327 1708 aa26.07■■□□□ 1.76
DDR1-231ENST00000417521 ARID4BQ4LE39 1312 aaPredicted RBP26.05■■□□□ 1.76
DDR1-231ENST00000417521 AFAP1Q8N556 730 aa26.04■■□□□ 1.76
DDR1-231ENST00000417521 YEATS2Q9ULM3 1422 aa26.03■■□□□ 1.76
DDR1-231ENST00000417521 ZNF518AQ6AHZ1 1483 aa26.02■■□□□ 1.76
DDR1-231ENST00000417521 ARHGEF40Q8TER5 1519 aa26.02■■□□□ 1.76
DDR1-231ENST00000417521 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.75
DDR1-231ENST00000417521 GPATCH8Q9UKJ3 1502 aaKnown RBP26.01■■□□□ 1.75
DDR1-231ENST00000417521 ZFYVE16Q7Z3T8 1539 aa26■■□□□ 1.75
DDR1-231ENST00000417521 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
DDR1-231ENST00000417521 CFDP1Q9UEE9 299 aaPredicted RBP25.98■■□□□ 1.75
DDR1-231ENST00000417521 PREX2Q70Z35 1606 aa25.98■■□□□ 1.75
DDR1-231ENST00000417521 ZNF777Q9ULD5 760 aaPredicted RBP25.98■■□□□ 1.75
DDR1-231ENST00000417521 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
DDR1-231ENST00000417521 EHBP1L1Q8N3D4 1523 aa25.95■■□□□ 1.74
DDR1-231ENST00000417521 TRAPPC8Q9Y2L5 1435 aa25.94■■□□□ 1.74
DDR1-231ENST00000417521 ARHGEF12Q9NZN5 1544 aa25.94■■□□□ 1.74
DDR1-231ENST00000417521 ATP10AO60312 1499 aa25.94■■□□□ 1.74
DDR1-231ENST00000417521 MYT1LQ9UL68 1186 aa25.93■■□□□ 1.74
DDR1-231ENST00000417521 KDM5CP41229 1560 aa25.93■■□□□ 1.74
DDR1-231ENST00000417521 ABCC1P33527 1531 aa25.92■■□□□ 1.74
DDR1-231ENST00000417521 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
DDR1-231ENST00000417521 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.74
DDR1-231ENST00000417521 CDC42BPAQ5VT25 1732 aa25.89■■□□□ 1.73
DDR1-231ENST00000417521 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.73
DDR1-231ENST00000417521 HECW2Q9P2P5 1572 aa25.88■■□□□ 1.73
DDR1-231ENST00000417521 HNRNPMP52272 730 aaKnown RBP eCLIP25.88■■□□□ 1.73
DDR1-231ENST00000417521 ADAMTSL3P82987 1691 aa25.88■■□□□ 1.73
DDR1-231ENST00000417521 PLEKHH2Q8IVE3 1493 aa25.88■■□□□ 1.73
DDR1-231ENST00000417521 PTPRMP28827 1452 aa25.86■■□□□ 1.73
DDR1-231ENST00000417521 BCORL1Q5H9F3 1711 aa25.86■■□□□ 1.73
DDR1-231ENST00000417521 TIAM1Q13009 1591 aa25.85■■□□□ 1.73
DDR1-231ENST00000417521 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
DDR1-231ENST00000417521 MLECQ14165 292 aa25.83■■□□□ 1.73
DDR1-231ENST00000417521 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
DDR1-231ENST00000417521 MAP3K1Q13233 1512 aa25.82■■□□□ 1.72
DDR1-231ENST00000417521 LRRC9Q6ZRR7 1453 aa25.82■■□□□ 1.72
DDR1-231ENST00000417521 SPAG9O60271 1321 aaKnown RBP25.81■■□□□ 1.72
DDR1-231ENST00000417521 ZNF644Q9H582 1327 aaPredicted RBP25.81■■□□□ 1.72
DDR1-231ENST00000417521 SYCP2Q9BX26 1530 aa25.8■■□□□ 1.72
DDR1-231ENST00000417521 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
DDR1-231ENST00000417521 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
DDR1-231ENST00000417521 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
DDR1-231ENST00000417521 DIP2CQ9Y2E4 1556 aa25.77■■□□□ 1.72
DDR1-231ENST00000417521 APLP2Q06481 763 aa25.76■■□□□ 1.71
DDR1-231ENST00000417521 FBXO41Q8TF61 875 aa25.76■■□□□ 1.71
DDR1-231ENST00000417521 SIGLEC1Q9BZZ2 1709 aa25.75■■□□□ 1.71
DDR1-231ENST00000417521 REREQ9P2R6 1566 aa25.75■■□□□ 1.71
DDR1-231ENST00000417521 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
DDR1-231ENST00000417521 MBD5Q9P267 1494 aa25.73■■□□□ 1.71
DDR1-231ENST00000417521 RSPH4AQ5TD94 716 aa25.72■■□□□ 1.71
DDR1-231ENST00000417521 AGLP35573 1532 aa25.71■■□□□ 1.71
DDR1-231ENST00000417521 ABCA6Q8N139 1617 aa25.7■■□□□ 1.71
DDR1-231ENST00000417521 KIDINS220Q9ULH0 1771 aa25.69■■□□□ 1.7
DDR1-231ENST00000417521 ATP7AQ04656 1500 aa25.66■■□□□ 1.7
DDR1-231ENST00000417521 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
DDR1-231ENST00000417521 RIMS1Q86UR5 1692 aaKnown RBP25.65■■□□□ 1.7
DDR1-231ENST00000417521 CAMSAP2Q08AD1 1489 aa25.64■■□□□ 1.7
DDR1-231ENST00000417521 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
DDR1-231ENST00000417521 ESF1Q9H501 851 aaKnown RBP25.62■■□□□ 1.69
DDR1-231ENST00000417521 MIA2Q96PC5 1412 aa25.62■■□□□ 1.69
DDR1-231ENST00000417521 MYOM3Q5VTT5 1437 aa25.61■■□□□ 1.69
DDR1-231ENST00000417521 A2MP01023 1474 aa25.61■■□□□ 1.69
DDR1-231ENST00000417521 CCDC141Q6ZP82 1450 aa25.61■■□□□ 1.69
DDR1-231ENST00000417521 INO80Q9ULG1 1556 aaPredicted RBP25.6■■□□□ 1.69
DDR1-231ENST00000417521 TSPY4P0CV99 314 aa25.6■■□□□ 1.69
DDR1-231ENST00000417521 TSPY10P0CW01 314 aa25.6■■□□□ 1.69
DDR1-231ENST00000417521 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
DDR1-231ENST00000417521 LMTK3Q96Q04 1460 aa25.57■■□□□ 1.68
DDR1-231ENST00000417521 DHX29Q7Z478 1369 aaKnown RBP25.55■■□□□ 1.68
DDR1-231ENST00000417521 FER1L4A9Z1Z3 1794 aa25.55■■□□□ 1.68
DDR1-231ENST00000417521 CNTLNQ9NXG0 1405 aa25.54■■□□□ 1.68
DDR1-231ENST00000417521 PLXNC1O60486 1568 aa25.53■■□□□ 1.68
DDR1-231ENST00000417521 ARHGEF5Q12774 1597 aa25.53■■□□□ 1.68
DDR1-231ENST00000417521 PPP6R1Q9UPN7 881 aa25.52■■□□□ 1.68
DDR1-231ENST00000417521 GGT6Q6P531 493 aa25.51■■□□□ 1.67
DDR1-231ENST00000417521 ZMYM3Q14202 1370 aa25.45■■□□□ 1.66
DDR1-231ENST00000417521 HSPA2P54652 639 aa25.45■■□□□ 1.66
DDR1-231ENST00000417521 KIF3BO15066 747 aa25.44■■□□□ 1.66
DDR1-231ENST00000417521 ADGBQ8N7X0 1667 aa25.44■■□□□ 1.66
DDR1-231ENST00000417521 FGD6Q6ZV73 1430 aa25.42■■□□□ 1.66
DDR1-231ENST00000417521 UHRF1BP1Q6BDS2 1440 aa25.39■■□□□ 1.66
DDR1-231ENST00000417521 MAST1Q9Y2H9 1570 aa25.38■■□□□ 1.65
DDR1-231ENST00000417521 TCOF1Q13428 1488 aaKnown RBP25.37■■□□□ 1.65
DDR1-231ENST00000417521 ABCC5O15440 1437 aa25.37■■□□□ 1.65
DDR1-231ENST00000417521 NPATQ14207 1427 aa25.36■■□□□ 1.65
DDR1-231ENST00000417521 PTPN23Q9H3S7 1636 aa25.35■■□□□ 1.65
DDR1-231ENST00000417521 C3P01024 1663 aa25.34■■□□□ 1.65
DDR1-231ENST00000417521 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
DDR1-231ENST00000417521 WASHC2CQ9Y4E1 1318 aa25.32■■□□□ 1.64
DDR1-231ENST00000417521 SOCS7O14512 581 aa25.32■■□□□ 1.64
DDR1-231ENST00000417521 DAPK1P53355 1430 aa25.31■■□□□ 1.64
DDR1-231ENST00000417521 MROH2AA6NES4 1674 aa25.31■■□□□ 1.64
DDR1-231ENST00000417521 SETD1BQ9UPS6 1966 aaKnown RBP25.31■■□□□ 1.64
DDR1-231ENST00000417521 PREX1Q8TCU6 1659 aa25.3■■□□□ 1.64
DDR1-231ENST00000417521 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms