RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
COPS3-202ENST00000417352 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
COPS3-202ENST00000417352 EEA1Q15075 1411 aa11.52□□□□□ -0.56
COPS3-202ENST00000417352 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.56
COPS3-202ENST00000417352 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
COPS3-202ENST00000417352 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
COPS3-202ENST00000417352 ARID4BQ4LE39 1312 aaPredicted RBP11.52□□□□□ -0.57
COPS3-202ENST00000417352 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
COPS3-202ENST00000417352 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
COPS3-202ENST00000417352 KIF21BO75037 1637 aa11.48□□□□□ -0.57
COPS3-202ENST00000417352 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
COPS3-202ENST00000417352 ABCA9Q8IUA7 1624 aa11.46□□□□□ -0.58
COPS3-202ENST00000417352 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
COPS3-202ENST00000417352 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
COPS3-202ENST00000417352 PHLDB1Q86UU1 1377 aa11.43□□□□□ -0.58
COPS3-202ENST00000417352 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
COPS3-202ENST00000417352 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
COPS3-202ENST00000417352 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
COPS3-202ENST00000417352 NEO1Q92859 1461 aa11.41□□□□□ -0.58
COPS3-202ENST00000417352 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
COPS3-202ENST00000417352 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.58
COPS3-202ENST00000417352 MLECQ14165 292 aa11.4□□□□□ -0.58
COPS3-202ENST00000417352 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
COPS3-202ENST00000417352 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.59
COPS3-202ENST00000417352 FANCAO15360 1455 aa11.38□□□□□ -0.59
COPS3-202ENST00000417352 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
COPS3-202ENST00000417352 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
COPS3-202ENST00000417352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.37□□□□□ -0.596e-8■■■■□ 20.3
COPS3-202ENST00000417352 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
COPS3-202ENST00000417352 TTC37Q6PGP7 1564 aa11.36□□□□□ -0.59
COPS3-202ENST00000417352 FMN1Q68DA7 1419 aa11.35□□□□□ -0.59
COPS3-202ENST00000417352 CFAP74Q9C0B2 1584 aa11.35□□□□□ -0.59
COPS3-202ENST00000417352 PTPRMP28827 1452 aa11.34□□□□□ -0.59
COPS3-202ENST00000417352 EFCAB2Q5VUJ9 269 aa11.34□□□□□ -0.59
COPS3-202ENST00000417352 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
COPS3-202ENST00000417352 FRMPD1Q5SYB0 1578 aa11.33□□□□□ -0.6
COPS3-202ENST00000417352 SCAPERQ9BY12 1400 aa11.33□□□□□ -0.6
COPS3-202ENST00000417352 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
COPS3-202ENST00000417352 POGZQ7Z3K3 1410 aa11.32□□□□□ -0.6
COPS3-202ENST00000417352 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
COPS3-202ENST00000417352 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
COPS3-202ENST00000417352 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
COPS3-202ENST00000417352 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
COPS3-202ENST00000417352 RIMS1Q86UR5 1692 aaKnown RBP11.31□□□□□ -0.6
COPS3-202ENST00000417352 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
COPS3-202ENST00000417352 MYO5CQ9NQX4 1742 aa11.3□□□□□ -0.6
COPS3-202ENST00000417352 PLCH2O75038 1416 aa11.3□□□□□ -0.6
COPS3-202ENST00000417352 CLIP1P30622 1438 aa11.3□□□□□ -0.6
COPS3-202ENST00000417352 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
COPS3-202ENST00000417352 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
COPS3-202ENST00000417352 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
COPS3-202ENST00000417352 ARHGEF40Q8TER5 1519 aa11.29□□□□□ -0.6
COPS3-202ENST00000417352 KIF14Q15058 1648 aa11.28□□□□□ -0.6
COPS3-202ENST00000417352 HSPA2P54652 639 aa11.28□□□□□ -0.6
COPS3-202ENST00000417352 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
COPS3-202ENST00000417352 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
COPS3-202ENST00000417352 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
COPS3-202ENST00000417352 LRRIQ1Q96JM4 1722 aa11.25□□□□□ -0.61
COPS3-202ENST00000417352 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
COPS3-202ENST00000417352 CEBPAP49715 358 aaPredicted RBP11.24□□□□□ -0.61
COPS3-202ENST00000417352 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
COPS3-202ENST00000417352 ATP10AO60312 1499 aa11.24□□□□□ -0.61
COPS3-202ENST00000417352 MAGI2Q86UL8 1455 aa11.24□□□□□ -0.61
COPS3-202ENST00000417352 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
COPS3-202ENST00000417352 ZMYM4Q5VZL5 1548 aa11.23□□□□□ -0.61
COPS3-202ENST00000417352 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
COPS3-202ENST00000417352 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
COPS3-202ENST00000417352 CCDC18Q5T9S5 1454 aa11.21□□□□□ -0.61
COPS3-202ENST00000417352 ZNF518AQ6AHZ1 1483 aa11.21□□□□□ -0.61
COPS3-202ENST00000417352 C9orf84Q5VXU9 1444 aa11.21□□□□□ -0.61
COPS3-202ENST00000417352 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.61
COPS3-202ENST00000417352 LMTK3Q96Q04 1460 aa11.2□□□□□ -0.62
COPS3-202ENST00000417352 FBXO41Q8TF61 875 aa11.2□□□□□ -0.62
COPS3-202ENST00000417352 CDC42BPBQ9Y5S2 1711 aa11.2□□□□□ -0.62
COPS3-202ENST00000417352 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
COPS3-202ENST00000417352 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
COPS3-202ENST00000417352 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
COPS3-202ENST00000417352 HNRNPMP52272 730 aaKnown RBP eCLIP11.18□□□□□ -0.62
COPS3-202ENST00000417352 CFDP1Q9UEE9 299 aaPredicted RBP11.17□□□□□ -0.62
COPS3-202ENST00000417352 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
COPS3-202ENST00000417352 FYCO1Q9BQS8 1478 aa11.16□□□□□ -0.62
COPS3-202ENST00000417352 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
COPS3-202ENST00000417352 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
COPS3-202ENST00000417352 CDC42BPAQ5VT25 1732 aa11.15□□□□□ -0.62
COPS3-202ENST00000417352 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
COPS3-202ENST00000417352 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.63
COPS3-202ENST00000417352 SPAG9O60271 1321 aaKnown RBP11.14□□□□□ -0.63
COPS3-202ENST00000417352 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
COPS3-202ENST00000417352 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
COPS3-202ENST00000417352 ITSN2Q9NZM3 1697 aa11.14□□□□□ -0.63
COPS3-202ENST00000417352 DIP2CQ9Y2E4 1556 aa11.13□□□□□ -0.63
COPS3-202ENST00000417352 ARHGEF12Q9NZN5 1544 aa11.13□□□□□ -0.63
COPS3-202ENST00000417352 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
COPS3-202ENST00000417352 KDM5CP41229 1560 aa11.12□□□□□ -0.63
COPS3-202ENST00000417352 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
COPS3-202ENST00000417352 ABCC1P33527 1531 aa11.12□□□□□ -0.63
COPS3-202ENST00000417352 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
COPS3-202ENST00000417352 GGT6Q6P531 493 aa11.11□□□□□ -0.63
COPS3-202ENST00000417352 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
COPS3-202ENST00000417352 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms