RNA–Protein interactions for RNA: ENST00000417256.3

CT47A9-201, Transcript of cancer/testis antigen family 47, member A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A9, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A9-201ENST00000417256 NCOA2Q15596 1464 aa28.93■■■□□ 2.22
CT47A9-201ENST00000417256 AKNAQ7Z591 1439 aa28.91■■■□□ 2.22
CT47A9-201ENST00000417256 ARHGAP5Q13017 1502 aa28.89■■■□□ 2.22
CT47A9-201ENST00000417256 CFDP1Q9UEE9 299 aaPredicted RBP28.89■■■□□ 2.22
CT47A9-201ENST00000417256 KDM6BO15054 1643 aa28.89■■■□□ 2.22
CT47A9-201ENST00000417256 PREX2Q70Z35 1606 aa28.88■■■□□ 2.21
CT47A9-201ENST00000417256 CDC42BPAQ5VT25 1732 aa28.83■■■□□ 2.21
CT47A9-201ENST00000417256 COL17A1Q9UMD9 1497 aaPredicted RBP28.83■■■□□ 2.21
CT47A9-201ENST00000417256 ADGRL1O94910 1474 aa28.82■■■□□ 2.2
CT47A9-201ENST00000417256 CDC42BPBQ9Y5S2 1711 aa28.82■■■□□ 2.2
CT47A9-201ENST00000417256 ITSN2Q9NZM3 1697 aa28.81■■■□□ 2.2
CT47A9-201ENST00000417256 DENND4BO75064 1496 aaPredicted RBP28.8■■■□□ 2.2
CT47A9-201ENST00000417256 PLEKHH2Q8IVE3 1493 aa28.8■■■□□ 2.2
CT47A9-201ENST00000417256 SCAPERQ9BY12 1400 aa28.79■■■□□ 2.2
CT47A9-201ENST00000417256 MIA2Q96PC5 1412 aa28.77■■■□□ 2.2
CT47A9-201ENST00000417256 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
CT47A9-201ENST00000417256 MYOM3Q5VTT5 1437 aa28.77■■■□□ 2.2
CT47A9-201ENST00000417256 ZNF777Q9ULD5 760 aaPredicted RBP28.75■■■□□ 2.19
CT47A9-201ENST00000417256 RAPGEF3O95398 923 aa28.72■■■□□ 2.19
CT47A9-201ENST00000417256 POGZQ7Z3K3 1410 aa28.71■■■□□ 2.19
CT47A9-201ENST00000417256 ABCC1P33527 1531 aa28.7■■■□□ 2.19
CT47A9-201ENST00000417256 RSPH4AQ5TD94 716 aa28.7■■■□□ 2.18
CT47A9-201ENST00000417256 ZNF518AQ6AHZ1 1483 aa28.69■■■□□ 2.18
CT47A9-201ENST00000417256 SAMD9LQ8IVG5 1584 aa28.68■■■□□ 2.18
CT47A9-201ENST00000417256 MAGI2Q86UL8 1455 aa28.66■■■□□ 2.18
CT47A9-201ENST00000417256 ZNF644Q9H582 1327 aaPredicted RBP28.64■■■□□ 2.17
CT47A9-201ENST00000417256 ZMYM4Q5VZL5 1548 aa28.63■■■□□ 2.17
CT47A9-201ENST00000417256 ARHGEF12Q9NZN5 1544 aa28.63■■■□□ 2.17
CT47A9-201ENST00000417256 RICTORQ6R327 1708 aa28.63■■■□□ 2.17
CT47A9-201ENST00000417256 FGD6Q6ZV73 1430 aa28.62■■■□□ 2.17
CT47A9-201ENST00000417256 CAMSAP2Q08AD1 1489 aa28.62■■■□□ 2.17
CT47A9-201ENST00000417256 HNRNPMP52272 730 aaKnown RBP eCLIP28.62■■■□□ 2.17
CT47A9-201ENST00000417256 FRMPD1Q5SYB0 1578 aa28.62■■■□□ 2.17
CT47A9-201ENST00000417256 AFAP1Q8N556 730 aa28.61■■■□□ 2.17
CT47A9-201ENST00000417256 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
CT47A9-201ENST00000417256 MBD5Q9P267 1494 aa28.59■■■□□ 2.17
CT47A9-201ENST00000417256 SYCP2Q9BX26 1530 aa28.59■■■□□ 2.17
CT47A9-201ENST00000417256 KDM5CP41229 1560 aa28.58■■■□□ 2.17
CT47A9-201ENST00000417256 MLH3Q9UHC1 1453 aa28.57■■■□□ 2.16
CT47A9-201ENST00000417256 TCOF1Q13428 1488 aaKnown RBP28.55■■■□□ 2.16
CT47A9-201ENST00000417256 PPARGC1BQ86YN6 1023 aaKnown RBP28.55■■■□□ 2.16
CT47A9-201ENST00000417256 SPAG9O60271 1321 aaKnown RBP28.53■■■□□ 2.16
CT47A9-201ENST00000417256 ARHGEF5Q12774 1597 aa28.53■■■□□ 2.16
CT47A9-201ENST00000417256 CCDC141Q6ZP82 1450 aa28.52■■■□□ 2.16
CT47A9-201ENST00000417256 PTPN23Q9H3S7 1636 aa28.51■■■□□ 2.15
CT47A9-201ENST00000417256 TSPY4P0CV99 314 aa28.5■■■□□ 2.15
CT47A9-201ENST00000417256 TSPY10P0CW01 314 aa28.5■■■□□ 2.15
CT47A9-201ENST00000417256 ZFYVE16Q7Z3T8 1539 aa28.49■■■□□ 2.15
CT47A9-201ENST00000417256 RTEL1-TNFRSF6BF6WH68 1400 aa28.49■■■□□ 2.15
CT47A9-201ENST00000417256 MYT1LQ9UL68 1186 aa28.48■■■□□ 2.15
CT47A9-201ENST00000417256 HECW2Q9P2P5 1572 aa28.48■■■□□ 2.15
CT47A9-201ENST00000417256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.48■■■□□ 2.15
CT47A9-201ENST00000417256 ARHGEF40Q8TER5 1519 aa28.46■■■□□ 2.15
CT47A9-201ENST00000417256 ATP10AO60312 1499 aa28.44■■■□□ 2.14
CT47A9-201ENST00000417256 YEATS2Q9ULM3 1422 aa28.43■■■□□ 2.14
CT47A9-201ENST00000417256 FAM50AQ14320 339 aaKnown RBP28.42■■■□□ 2.14
CT47A9-201ENST00000417256 ATP7AQ04656 1500 aa28.4■■■□□ 2.14
CT47A9-201ENST00000417256 RRBP1Q9P2E9 1410 aaKnown RBP28.4■■■□□ 2.14
CT47A9-201ENST00000417256 INO80Q9ULG1 1556 aaPredicted RBP28.38■■■□□ 2.13
CT47A9-201ENST00000417256 ABCC5O15440 1437 aa28.38■■■□□ 2.13
CT47A9-201ENST00000417256 C9orf84Q5VXU9 1444 aa28.38■■■□□ 2.13
CT47A9-201ENST00000417256 SHANK2Q9UPX8 1470 aa28.38■■■□□ 2.13
CT47A9-201ENST00000417256 KIDINS220Q9ULH0 1771 aa28.37■■■□□ 2.13
CT47A9-201ENST00000417256 DAPK1P53355 1430 aa28.36■■■□□ 2.13
CT47A9-201ENST00000417256 MAST1Q9Y2H9 1570 aa28.36■■■□□ 2.13
CT47A9-201ENST00000417256 REREQ9P2R6 1566 aa28.35■■■□□ 2.13
CT47A9-201ENST00000417256 DNMT1P26358 1616 aaKnown RBP28.35■■■□□ 2.13
CT47A9-201ENST00000417256 DIP2CQ9Y2E4 1556 aa28.34■■■□□ 2.13
CT47A9-201ENST00000417256 ABCA6Q8N139 1617 aa28.3■■■□□ 2.12
CT47A9-201ENST00000417256 ARID4BQ4LE39 1312 aaPredicted RBP28.29■■■□□ 2.12
CT47A9-201ENST00000417256 AGLP35573 1532 aa28.28■■■□□ 2.12
CT47A9-201ENST00000417256 A2MP01023 1474 aa28.27■■■□□ 2.12
CT47A9-201ENST00000417256 DHX29Q7Z478 1369 aaKnown RBP28.26■■■□□ 2.12
CT47A9-201ENST00000417256 ANKRD30AQ9BXX3 1397 aa28.26■■■□□ 2.12
CT47A9-201ENST00000417256 CROCC2H7BZ55 1655 aa28.25■■■□□ 2.11
CT47A9-201ENST00000417256 ADGBQ8N7X0 1667 aa28.24■■■□□ 2.11
CT47A9-201ENST00000417256 PLXNC1O60486 1568 aa28.24■■■□□ 2.11
CT47A9-201ENST00000417256 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
CT47A9-201ENST00000417256 NCOA1Q15788 1441 aa28.21■■■□□ 2.11
CT47A9-201ENST00000417256 ROCK1Q13464 1354 aa28.21■■■□□ 2.11
CT47A9-201ENST00000417256 KIF15Q9NS87 1388 aa28.19■■■□□ 2.1
CT47A9-201ENST00000417256 CHIC2Q9UKJ5 165 aa28.18■■■□□ 2.1
CT47A9-201ENST00000417256 DUOX2Q9NRD8 1548 aa28.17■■■□□ 2.1
CT47A9-201ENST00000417256 PPP6R1Q9UPN7 881 aa28.16■■■□□ 2.1
CT47A9-201ENST00000417256 RRP7BPQ9NSQ0 103 aa28.15■■■□□ 2.1
CT47A9-201ENST00000417256 PTPRKQ15262 1439 aa28.15■■■□□ 2.1
CT47A9-201ENST00000417256 ERBINQ96RT1 1412 aa28.12■■■□□ 2.09
CT47A9-201ENST00000417256 KDM4FA0A1W2PPD8 638 aa28.12■■■□□ 2.09
CT47A9-201ENST00000417256 ITGAEP38570 1179 aa28.12■■■□□ 2.09
CT47A9-201ENST00000417256 BCORL1Q5H9F3 1711 aa28.12■■■□□ 2.09
CT47A9-201ENST00000417256 SIGLEC1Q9BZZ2 1709 aa28.09■■■□□ 2.09
CT47A9-201ENST00000417256 KIF3BO15066 747 aa28.09■■■□□ 2.09
CT47A9-201ENST00000417256 ILDR1Q86SU0 546 aaPredicted RBP28.09■■■□□ 2.09
CT47A9-201ENST00000417256 MLECQ14165 292 aa28.08■■■□□ 2.09
CT47A9-201ENST00000417256 ADAMTSL3P82987 1691 aa28.07■■■□□ 2.08
CT47A9-201ENST00000417256 EIF2AK4Q9P2K8 1649 aaKnown RBP28.06■■■□□ 2.08
CT47A9-201ENST00000417256 ESF1Q9H501 851 aaKnown RBP28.05■■■□□ 2.08
CT47A9-201ENST00000417256 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
CT47A9-201ENST00000417256 GGT6Q6P531 493 aa28.03■■■□□ 2.08
CT47A9-201ENST00000417256 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms