RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 MORC1Q86VD1 984 aa21.01■□□□□ 0.95
SMIM13-202ENST00000416247 EIF5BO60841 1220 aaKnown RBP21■□□□□ 0.95
SMIM13-202ENST00000416247 BECN1Q14457 450 aa21■□□□□ 0.95
SMIM13-202ENST00000416247 DDRGK1Q96HY6 314 aa20.98■□□□□ 0.95
SMIM13-202ENST00000416247 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
SMIM13-202ENST00000416247 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
SMIM13-202ENST00000416247 HDGFP51858 240 aaKnown RBP20.94■□□□□ 0.94
SMIM13-202ENST00000416247 KTN1Q86UP2 1357 aaKnown RBP20.92■□□□□ 0.94
SMIM13-202ENST00000416247 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
SMIM13-202ENST00000416247 SPAG9O60271 1321 aaKnown RBP20.91■□□□□ 0.94
SMIM13-202ENST00000416247 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
SMIM13-202ENST00000416247 RSPH4AQ5TD94 716 aa20.87■□□□□ 0.93
SMIM13-202ENST00000416247 DHX57Q6P158 1386 aaKnown RBP20.86■□□□□ 0.93
SMIM13-202ENST00000416247 IGF1RP08069 1367 aa20.85■□□□□ 0.93
SMIM13-202ENST00000416247 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
SMIM13-202ENST00000416247 MS4A1P11836 297 aa20.84■□□□□ 0.93
SMIM13-202ENST00000416247 U2AF1L5P0DN76 240 aaPredicted RBP20.83■□□□□ 0.93
SMIM13-202ENST00000416247 U2AF1Q01081 240 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMIM13-202ENST00000416247 HDGFL2Q7Z4V5 671 aaPredicted RBP20.83■□□□□ 0.93
SMIM13-202ENST00000416247 RALBP1Q15311 655 aa20.81■□□□□ 0.92
SMIM13-202ENST00000416247 WASHC2CQ9Y4E1 1318 aa20.81■□□□□ 0.92
SMIM13-202ENST00000416247 CASC1Q6TDU7 716 aa20.8■□□□□ 0.92
SMIM13-202ENST00000416247 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
SMIM13-202ENST00000416247 GOLGA6L22H0YM25 854 aa20.79■□□□□ 0.92
SMIM13-202ENST00000416247 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
SMIM13-202ENST00000416247 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
SMIM13-202ENST00000416247 PTPRGP23470 1445 aa20.78■□□□□ 0.92
SMIM13-202ENST00000416247 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
SMIM13-202ENST00000416247 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
SMIM13-202ENST00000416247 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
SMIM13-202ENST00000416247 OS9Q13438 667 aaPredicted RBP20.75■□□□□ 0.91
SMIM13-202ENST00000416247 TPRNQ4KMQ1 711 aa20.74■□□□□ 0.91
SMIM13-202ENST00000416247 ANP32EQ9BTT0 268 aa20.73■□□□□ 0.91
SMIM13-202ENST00000416247 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
SMIM13-202ENST00000416247 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
SMIM13-202ENST00000416247 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
SMIM13-202ENST00000416247 TRAK1Q9UPV9 953 aa20.72■□□□□ 0.91
SMIM13-202ENST00000416247 RTF1Q92541 710 aaKnown RBP20.71■□□□□ 0.91
SMIM13-202ENST00000416247 NOP58Q9Y2X3 529 aaKnown RBP20.7■□□□□ 0.9
SMIM13-202ENST00000416247 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
SMIM13-202ENST00000416247 CCDC144AA2RUR9 1427 aa20.69■□□□□ 0.9
SMIM13-202ENST00000416247 ZNF644Q9H582 1327 aaPredicted RBP20.67■□□□□ 0.9
SMIM13-202ENST00000416247 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
SMIM13-202ENST00000416247 NCAPD3P42695 1498 aa20.66■□□□□ 0.9
SMIM13-202ENST00000416247 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
SMIM13-202ENST00000416247 TRIM44Q96DX7 344 aaPredicted RBP20.66■□□□□ 0.9
SMIM13-202ENST00000416247 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
SMIM13-202ENST00000416247 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
SMIM13-202ENST00000416247 APBB1O00213 710 aa20.65■□□□□ 0.9
SMIM13-202ENST00000416247 CYB5RLQ6IPT4 315 aa20.65■□□□□ 0.9
SMIM13-202ENST00000416247 IPO8O15397 1037 aaKnown RBP20.63■□□□□ 0.89
SMIM13-202ENST00000416247 KCNJ4P48050 445 aa20.63■□□□□ 0.89
SMIM13-202ENST00000416247 PANK3Q9H999 370 aa20.62■□□□□ 0.89
SMIM13-202ENST00000416247 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
SMIM13-202ENST00000416247 GOLGA2Q08379 1002 aa20.62■□□□□ 0.89
SMIM13-202ENST00000416247 TAOK2Q9UL54 1235 aa20.62■□□□□ 0.89
SMIM13-202ENST00000416247 AQRO60306 1485 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMIM13-202ENST00000416247 NPHP1O15259 732 aa20.61■□□□□ 0.89
SMIM13-202ENST00000416247 FGD1P98174 961 aa20.6■□□□□ 0.89
SMIM13-202ENST00000416247 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
SMIM13-202ENST00000416247 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
SMIM13-202ENST00000416247 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
SMIM13-202ENST00000416247 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
SMIM13-202ENST00000416247 ITPRIPQ8IWB1 547 aa20.59■□□□□ 0.89
SMIM13-202ENST00000416247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMIM13-202ENST00000416247 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
SMIM13-202ENST00000416247 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
SMIM13-202ENST00000416247 NGDNQ8NEJ9 315 aaKnown RBP20.56■□□□□ 0.88
SMIM13-202ENST00000416247 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
SMIM13-202ENST00000416247 USP47Q96K76 1375 aa20.56■□□□□ 0.88
SMIM13-202ENST00000416247 CSB-PGBD3P0DP91 1061 aa20.55■□□□□ 0.88
SMIM13-202ENST00000416247 SPRYD3Q8NCJ5 442 aa20.55■□□□□ 0.88
SMIM13-202ENST00000416247 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
SMIM13-202ENST00000416247 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
SMIM13-202ENST00000416247 KIF21BO75037 1637 aa20.54■□□□□ 0.88
SMIM13-202ENST00000416247 ZRSR1Q15695 479 aaKnown RBP20.54■□□□□ 0.88
SMIM13-202ENST00000416247 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
SMIM13-202ENST00000416247 MYOM3Q5VTT5 1437 aa20.54■□□□□ 0.88
SMIM13-202ENST00000416247 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
SMIM13-202ENST00000416247 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
SMIM13-202ENST00000416247 HSCBQ8IWL3 235 aa20.53■□□□□ 0.88
SMIM13-202ENST00000416247 PTMAP06454 111 aaKnown RBP20.53■□□□□ 0.88
SMIM13-202ENST00000416247 RWDD1Q9H446 243 aaPredicted RBP20.52■□□□□ 0.88
SMIM13-202ENST00000416247 NAP1L2Q9ULW6 460 aaPredicted RBP20.52■□□□□ 0.88
SMIM13-202ENST00000416247 PDE3BQ13370 1112 aa20.52■□□□□ 0.88
SMIM13-202ENST00000416247 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
SMIM13-202ENST00000416247 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
SMIM13-202ENST00000416247 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
SMIM13-202ENST00000416247 CENPJQ9HC77 1338 aaPredicted RBP20.48■□□□□ 0.87
SMIM13-202ENST00000416247 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
SMIM13-202ENST00000416247 PLCB2Q00722 1185 aa20.48■□□□□ 0.87
SMIM13-202ENST00000416247 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
SMIM13-202ENST00000416247 AMPHP49418 695 aa20.47■□□□□ 0.87
SMIM13-202ENST00000416247 STK31Q9BXU1 1019 aa20.47■□□□□ 0.87
SMIM13-202ENST00000416247 MINK1Q8N4C8 1332 aaPredicted RBP20.46■□□□□ 0.87
SMIM13-202ENST00000416247 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
SMIM13-202ENST00000416247 UACAQ9BZF9 1416 aa20.44■□□□□ 0.86
SMIM13-202ENST00000416247 CFTRP13569 1480 aa20.44■□□□□ 0.86
SMIM13-202ENST00000416247 BCL2L13Q9BXK5 485 aa20.44■□□□□ 0.86
SMIM13-202ENST00000416247 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms