RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 NLRP6P59044 892 aa14.55□□□□□ -0.08
RAD50-202ENST00000416135 PKD2Q13563 968 aa14.55□□□□□ -0.08
RAD50-202ENST00000416135 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
RAD50-202ENST00000416135 GPR153Q6NV75 609 aa14.54□□□□□ -0.08
RAD50-202ENST00000416135 ERBB3P21860 1342 aa14.53□□□□□ -0.08
RAD50-202ENST00000416135 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
RAD50-202ENST00000416135 RIMBP2O15034 1052 aa14.51□□□□□ -0.09
RAD50-202ENST00000416135 RGL2O15211 777 aa14.51□□□□□ -0.09
RAD50-202ENST00000416135 ZSWIM6Q9HCJ5 1215 aa14.51□□□□□ -0.09
RAD50-202ENST00000416135 STK25O00506 426 aa14.5□□□□□ -0.09
RAD50-202ENST00000416135 VARS2Q5ST30 1063 aaKnown RBP14.5□□□□□ -0.09
RAD50-202ENST00000416135 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
RAD50-202ENST00000416135 KIF3CO14782 793 aa14.45□□□□□ -0.1
RAD50-202ENST00000416135 ARSIQ5FYB1 569 aa14.43□□□□□ -0.1
RAD50-202ENST00000416135 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.13e-8■■■■□ 25.8
RAD50-202ENST00000416135 ZNF687Q8N1G0 1237 aa14.39□□□□□ -0.11
RAD50-202ENST00000416135 C2orf72A6NCS6 295 aa14.38□□□□□ -0.11
RAD50-202ENST00000416135 PPP1R37O75864 691 aa14.33□□□□□ -0.12
RAD50-202ENST00000416135 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
RAD50-202ENST00000416135 RNF166Q96A37 237 aaPredicted RBP14.25□□□□□ -0.13
RAD50-202ENST00000416135 NUDT7P0C024 238 aa14.24□□□□□ -0.13
RAD50-202ENST00000416135 SLC34A2O95436 690 aa14.23□□□□□ -0.13
RAD50-202ENST00000416135 MYT1LQ9UL68 1186 aa14.22□□□□□ -0.13
RAD50-202ENST00000416135 PCDHGA4Q9Y5G9 962 aa14.22□□□□□ -0.13
RAD50-202ENST00000416135 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
RAD50-202ENST00000416135 TMC2Q8TDI7 906 aa14.19□□□□□ -0.14
RAD50-202ENST00000416135 LHX6Q9UPM6 363 aa14.19□□□□□ -0.14
RAD50-202ENST00000416135 LSM11P83369 360 aaKnown RBP eCLIP14.16□□□□□ -0.14
RAD50-202ENST00000416135 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
RAD50-202ENST00000416135 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
RAD50-202ENST00000416135 KDM4FA0A1W2PPD8 638 aa14.13□□□□□ -0.15
RAD50-202ENST00000416135 AXIN2Q9Y2T1 843 aa14.1□□□□□ -0.15
RAD50-202ENST00000416135 PTGER2P43116 358 aa14.09□□□□□ -0.15
RAD50-202ENST00000416135 PBX2P40425 430 aa14.07□□□□□ -0.16
RAD50-202ENST00000416135 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
RAD50-202ENST00000416135 FOXK1P85037 733 aa14.06□□□□□ -0.16
RAD50-202ENST00000416135 PTCD2Q8WV60 388 aaKnown RBP14.06□□□□□ -0.16
RAD50-202ENST00000416135 PLPP6Q8IY26 295 aa14.04□□□□□ -0.16
RAD50-202ENST00000416135 GPHNQ9NQX3 736 aaPredicted RBP14.04□□□□□ -0.16
RAD50-202ENST00000416135 CHGAP10645 457 aaKnown RBP14.03□□□□□ -0.16
RAD50-202ENST00000416135 DSG2Q14126 1118 aa14.03□□□□□ -0.16
RAD50-202ENST00000416135 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
RAD50-202ENST00000416135 ARHGAP33O14559 1287 aa13.95□□□□□ -0.18
RAD50-202ENST00000416135 ADGRD1Q6QNK2 874 aa13.93□□□□□ -0.18
RAD50-202ENST00000416135 PSDA5PKW4 1024 aaPredicted RBP13.92□□□□□ -0.18
RAD50-202ENST00000416135 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
RAD50-202ENST00000416135 PSEN2P49810 448 aa13.91□□□□□ -0.18
RAD50-202ENST00000416135 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.18
RAD50-202ENST00000416135 OXER1Q8TDS5 423 aa13.88□□□□□ -0.19
RAD50-202ENST00000416135 HRO43593 1189 aa13.87□□□□□ -0.19
RAD50-202ENST00000416135 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
RAD50-202ENST00000416135 TK2O00142 265 aa13.84□□□□□ -0.19
RAD50-202ENST00000416135 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
RAD50-202ENST00000416135 TBC1D12O60347 775 aa13.82□□□□□ -0.2
RAD50-202ENST00000416135 UPF1Q92900 1129 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAD50-202ENST00000416135 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
RAD50-202ENST00000416135 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
RAD50-202ENST00000416135 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
RAD50-202ENST00000416135 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
RAD50-202ENST00000416135 HCSTQ9UBK5 93 aa13.76□□□□□ -0.21
RAD50-202ENST00000416135 ZNF454Q8N9F8 522 aa13.72□□□□□ -0.21
RAD50-202ENST00000416135 FOSBP53539 338 aa13.71□□□□□ -0.21
RAD50-202ENST00000416135 PLA2G2EQ9NZK7 142 aa13.71□□□□□ -0.21
RAD50-202ENST00000416135 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.21
RAD50-202ENST00000416135 BCL2L12Q9HB09 334 aa13.7□□□□□ -0.22
RAD50-202ENST00000416135 PDE4AP27815 886 aa13.69□□□□□ -0.22
RAD50-202ENST00000416135 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
RAD50-202ENST00000416135 KCTD12Q96CX2 325 aaKnown RBP13.68□□□□□ -0.22
RAD50-202ENST00000416135 MFSD10Q14728 455 aa13.65□□□□□ -0.22
RAD50-202ENST00000416135 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
RAD50-202ENST00000416135 EVI5O60447 810 aa13.64□□□□□ -0.23
RAD50-202ENST00000416135 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
RAD50-202ENST00000416135 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
RAD50-202ENST00000416135 SLC4A5Q9BY07 1137 aa13.63□□□□□ -0.23
RAD50-202ENST00000416135 EMILIN3Q9NT22 766 aa13.63□□□□□ -0.23
RAD50-202ENST00000416135 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
RAD50-202ENST00000416135 BHMG1C9JSJ3 638 aaPredicted RBP13.61□□□□□ -0.23
RAD50-202ENST00000416135 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
RAD50-202ENST00000416135 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
RAD50-202ENST00000416135 ADAM33Q9BZ11 813 aa13.6□□□□□ -0.23
RAD50-202ENST00000416135 PTPREP23469 700 aa13.58□□□□□ -0.24
RAD50-202ENST00000416135 ZDHHC16Q969W1 377 aa13.56□□□□□ -0.24
RAD50-202ENST00000416135 STAC3Q96MF2 364 aa13.54□□□□□ -0.24
RAD50-202ENST00000416135 PCDHGA10Q9Y5H3 936 aa13.52□□□□□ -0.25
RAD50-202ENST00000416135 PTPN5P54829 565 aa13.51□□□□□ -0.25
RAD50-202ENST00000416135 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
RAD50-202ENST00000416135 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
RAD50-202ENST00000416135 THSD4Q6ZMP0 1018 aa13.5□□□□□ -0.25
RAD50-202ENST00000416135 COL9A1P20849 921 aa13.46□□□□□ -0.25
RAD50-202ENST00000416135 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
RAD50-202ENST00000416135 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
RAD50-202ENST00000416135 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
RAD50-202ENST00000416135 PROX2Q3B8N5 592 aa13.44□□□□□ -0.26
RAD50-202ENST00000416135 WNT2BQ93097 391 aa13.43□□□□□ -0.26
RAD50-202ENST00000416135 PHF14O94880 888 aa13.39□□□□□ -0.27
RAD50-202ENST00000416135 NBPF3Q9H094 633 aa13.39□□□□□ -0.27
RAD50-202ENST00000416135 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
RAD50-202ENST00000416135 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
RAD50-202ENST00000416135 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
RAD50-202ENST00000416135 RABGEF1Q9UJ41 708 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms