RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 PRDM4Q9UKN5 801 aa9.03□□□□□ -0.96
CLIP4-205ENST00000415891 CADPSQ9ULU8 1353 aa9.02□□□□□ -0.97
CLIP4-205ENST00000415891 MYO15BQ96JP2 1530 aa9.02□□□□□ -0.97
CLIP4-205ENST00000415891 LOC102724159A0A0B4J2E5 919 aa9.02□□□□□ -0.97
CLIP4-205ENST00000415891 RRP9O43818 475 aaKnown RBP9.02□□□□□ -0.97
CLIP4-205ENST00000415891 PWP2Q15269 919 aaKnown RBP9.02□□□□□ -0.97
CLIP4-205ENST00000415891 LAS1LQ9Y4W2 734 aaKnown RBP9.02□□□□□ -0.97
CLIP4-205ENST00000415891 E9PSI1 815 aa9.01□□□□□ -0.97
CLIP4-205ENST00000415891 CCDC125Q86Z20 511 aa9□□□□□ -0.97
CLIP4-205ENST00000415891 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
CLIP4-205ENST00000415891 CALD1Q05682 793 aaKnown RBP8.99□□□□□ -0.97
CLIP4-205ENST00000415891 FAM9BQ8IZU0 186 aa8.99□□□□□ -0.97
CLIP4-205ENST00000415891 SGSM3Q96HU1 749 aa8.98□□□□□ -0.97
CLIP4-205ENST00000415891 AXDND1Q5T1B0 1012 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-205ENST00000415891 TMCO4Q5TGY1 634 aa8.97□□□□□ -0.97
CLIP4-205ENST00000415891 APBB1O00213 710 aa8.96□□□□□ -0.98
CLIP4-205ENST00000415891 ZNF830Q96NB3 372 aaPredicted RBP8.96□□□□□ -0.98
CLIP4-205ENST00000415891 HDAC5Q9UQL6 1122 aa8.96□□□□□ -0.98
CLIP4-205ENST00000415891 RIPOR2Q9Y4F9 1068 aa8.96□□□□□ -0.98
CLIP4-205ENST00000415891 AEBP1Q8IUX7 1158 aa8.94□□□□□ -0.98
CLIP4-205ENST00000415891 HOXD11P31277 338 aaPredicted RBP8.94□□□□□ -0.98
CLIP4-205ENST00000415891 PKD2Q13563 968 aa8.94□□□□□ -0.98
CLIP4-205ENST00000415891 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
CLIP4-205ENST00000415891 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
CLIP4-205ENST00000415891 SOX12O15370 315 aa8.93□□□□□ -0.98
CLIP4-205ENST00000415891 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
CLIP4-205ENST00000415891 HSP90AA2PQ14568 343 aaPredicted RBP8.92□□□□□ -0.98
CLIP4-205ENST00000415891 SPTY2D1Q68D10 685 aaPredicted RBP8.92□□□□□ -0.98
CLIP4-205ENST00000415891 SLC52A1Q9NWF4 448 aa8.92□□□□□ -0.98
CLIP4-205ENST00000415891 BRD1O95696 1058 aa8.91□□□□□ -0.98
CLIP4-205ENST00000415891 IRX3P78415 501 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-205ENST00000415891 FOXD4L6Q3SYB3 417 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-205ENST00000415891 FOXD4L3Q6VB84 417 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-205ENST00000415891 DCAF8L1A6NGE4 600 aa8.9□□□□□ -0.98
CLIP4-205ENST00000415891 SPRYD3Q8NCJ5 442 aa8.9□□□□□ -0.98
CLIP4-205ENST00000415891 ANP32BQ92688 251 aaKnown RBP8.9□□□□□ -0.98
CLIP4-205ENST00000415891 NEUROD2Q15784 382 aa8.89□□□□□ -0.99
CLIP4-205ENST00000415891 NBPF11Q86T75 865 aa8.89□□□□□ -0.99
CLIP4-205ENST00000415891 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
CLIP4-205ENST00000415891 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
CLIP4-205ENST00000415891 CCDC180Q9P1Z9 1646 aa8.89□□□□□ -0.99
CLIP4-205ENST00000415891 PSEN1P49768 467 aa8.88□□□□□ -0.99
CLIP4-205ENST00000415891 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
CLIP4-205ENST00000415891 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
CLIP4-205ENST00000415891 SH3BP1Q9Y3L3 701 aa8.88□□□□□ -0.99
CLIP4-205ENST00000415891 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-205ENST00000415891 CENPJQ9HC77 1338 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-205ENST00000415891 CEP120Q8N960 986 aa8.87□□□□□ -0.99
CLIP4-205ENST00000415891 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-205ENST00000415891 FANCIQ9NVI1 1328 aa8.87□□□□□ -0.99
CLIP4-205ENST00000415891 APPP05067 770 aa8.87□□□□□ -0.99
CLIP4-205ENST00000415891 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
CLIP4-205ENST00000415891 RGS3P49796 1198 aa8.86□□□□□ -0.99
CLIP4-205ENST00000415891 TSHZ1Q6ZSZ6 1077 aa8.86□□□□□ -0.99
CLIP4-205ENST00000415891 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
CLIP4-205ENST00000415891 TMEM51Q9NW97 253 aa8.86□□□□□ -0.99
CLIP4-205ENST00000415891 DCAF1Q9Y4B6 1507 aa8.86□□□□□ -0.99
CLIP4-205ENST00000415891 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
CLIP4-205ENST00000415891 RINLQ6ZS11 566 aa8.85□□□□□ -0.99
CLIP4-205ENST00000415891 RBM19Q9Y4C8 960 aaKnown RBP8.84□□□□□ -0.99
CLIP4-205ENST00000415891 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLIP4-205ENST00000415891 TRIM44Q96DX7 344 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-205ENST00000415891 EGFL6Q8IUX8 553 aa8.83□□□□□ -1
CLIP4-205ENST00000415891 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
CLIP4-205ENST00000415891 NME8Q8N427 588 aa8.82□□□□□ -1
CLIP4-205ENST00000415891 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
CLIP4-205ENST00000415891 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
CLIP4-205ENST00000415891 MYH16Q9H6N6 1097 aa8.82□□□□□ -1
CLIP4-205ENST00000415891 FOXD4L1Q9NU39 408 aa8.82□□□□□ -1
CLIP4-205ENST00000415891 TERF2IPQ9NYB0 399 aa8.82□□□□□ -1
CLIP4-205ENST00000415891 CASC1Q6TDU7 716 aa8.8□□□□□ -1
CLIP4-205ENST00000415891 CCDC82Q8N4S0 544 aa8.8□□□□□ -1
CLIP4-205ENST00000415891 CCDC96Q2M329 555 aa8.8□□□□□ -1
CLIP4-205ENST00000415891 MYBPC2Q14324 1141 aa8.79□□□□□ -1
CLIP4-205ENST00000415891 CC2D1BQ5T0F9 858 aaKnown RBP8.79□□□□□ -1
CLIP4-205ENST00000415891 SEMA3FQ13275 785 aa8.78□□□□□ -1
CLIP4-205ENST00000415891 ANKRD13AQ8IZ07 590 aa8.78□□□□□ -1
CLIP4-205ENST00000415891 TPD52L2O43399 206 aaKnown RBP8.77□□□□□ -1.01
CLIP4-205ENST00000415891 MARCH6O60337 910 aa8.77□□□□□ -1.01
CLIP4-205ENST00000415891 APBB1IPQ7Z5R6 666 aaPredicted RBP8.77□□□□□ -1.01
CLIP4-205ENST00000415891 OTUD6BQ8N6M0 293 aa8.75□□□□□ -1.01
CLIP4-205ENST00000415891 TRIM41Q8WV44 630 aa8.75□□□□□ -1.01
CLIP4-205ENST00000415891 PPME1Q9Y570 386 aa8.75□□□□□ -1.01
CLIP4-205ENST00000415891 IRF6O14896 467 aa8.74□□□□□ -1.01
CLIP4-205ENST00000415891 NBPF9Q3BBW0 867 aa8.74□□□□□ -1.01
CLIP4-205ENST00000415891 SPINK5Q9NQ38 1064 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-205ENST00000415891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLIP4-205ENST00000415891 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
CLIP4-205ENST00000415891 RALBP1Q15311 655 aa8.73□□□□□ -1.01
CLIP4-205ENST00000415891 SDR16C5Q8N3Y7 309 aa8.73□□□□□ -1.01
CLIP4-205ENST00000415891 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
CLIP4-205ENST00000415891 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
CLIP4-205ENST00000415891 HSP90AA1P07900 732 aaKnown RBP8.73□□□□□ -1.01
CLIP4-205ENST00000415891 GORABQ5T7V8 394 aa8.73□□□□□ -1.01
CLIP4-205ENST00000415891 FAM43AQ8N2R8 423 aa8.73□□□□□ -1.01
CLIP4-205ENST00000415891 SPATA32Q96LK8 384 aa8.73□□□□□ -1.01
CLIP4-205ENST00000415891 SUGT1Q9Y2Z0 365 aa8.73□□□□□ -1.01
CLIP4-205ENST00000415891 MTA3Q9BTC8 594 aa8.72□□□□□ -1.01
CLIP4-205ENST00000415891 RPS6KL1Q9Y6S9 549 aa8.72□□□□□ -1.01
CLIP4-205ENST00000415891 VGLL3A8MV65 326 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms