RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
ATG4B-207ENST00000415107 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-207ENST00000415107 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
ATG4B-207ENST00000415107 KDM6BO15054 1643 aa18.65■□□□□ 0.58
ATG4B-207ENST00000415107 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
ATG4B-207ENST00000415107 AKNAQ7Z591 1439 aa18.64■□□□□ 0.57
ATG4B-207ENST00000415107 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
ATG4B-207ENST00000415107 ABCC1P33527 1531 aa18.61■□□□□ 0.57
ATG4B-207ENST00000415107 COL17A1Q9UMD9 1497 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-207ENST00000415107 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
ATG4B-207ENST00000415107 PLEKHH2Q8IVE3 1493 aa18.6■□□□□ 0.57
ATG4B-207ENST00000415107 MYOM3Q5VTT5 1437 aa18.6■□□□□ 0.57
ATG4B-207ENST00000415107 ADGRL1O94910 1474 aa18.59■□□□□ 0.57
ATG4B-207ENST00000415107 KIAA1107Q9UPP5 1409 aa18.59■□□□□ 0.57
ATG4B-207ENST00000415107 SAMD9LQ8IVG5 1584 aa18.59■□□□□ 0.57
ATG4B-207ENST00000415107 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
ATG4B-207ENST00000415107 FRMPD1Q5SYB0 1578 aa18.57■□□□□ 0.56
ATG4B-207ENST00000415107 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-207ENST00000415107 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
ATG4B-207ENST00000415107 POGZQ7Z3K3 1410 aa18.56■□□□□ 0.56
ATG4B-207ENST00000415107 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-207ENST00000415107 KDM5CP41229 1560 aa18.55■□□□□ 0.56
ATG4B-207ENST00000415107 SCAPERQ9BY12 1400 aa18.54■□□□□ 0.56
ATG4B-207ENST00000415107 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
ATG4B-207ENST00000415107 ARHGEF12Q9NZN5 1544 aa18.52■□□□□ 0.56
ATG4B-207ENST00000415107 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.55
ATG4B-207ENST00000415107 TCOF1Q13428 1488 aaKnown RBP18.52■□□□□ 0.55
ATG4B-207ENST00000415107 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.55
ATG4B-207ENST00000415107 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
ATG4B-207ENST00000415107 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
ATG4B-207ENST00000415107 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
ATG4B-207ENST00000415107 ARHGEF5Q12774 1597 aa18.5■□□□□ 0.55
ATG4B-207ENST00000415107 PTPN23Q9H3S7 1636 aa18.48■□□□□ 0.55
ATG4B-207ENST00000415107 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.55
ATG4B-207ENST00000415107 RSPH4AQ5TD94 716 aa18.46■□□□□ 0.55
ATG4B-207ENST00000415107 TRAPPC8Q9Y2L5 1435 aa18.46■□□□□ 0.55
ATG4B-207ENST00000415107 HECW2Q9P2P5 1572 aa18.46■□□□□ 0.55
ATG4B-207ENST00000415107 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
ATG4B-207ENST00000415107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.44■□□□□ 0.544e-7■□□□□ 8.1
ATG4B-207ENST00000415107 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
ATG4B-207ENST00000415107 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
ATG4B-207ENST00000415107 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-207ENST00000415107 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-207ENST00000415107 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-207ENST00000415107 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
ATG4B-207ENST00000415107 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
ATG4B-207ENST00000415107 MAST1Q9Y2H9 1570 aa18.41■□□□□ 0.54
ATG4B-207ENST00000415107 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
ATG4B-207ENST00000415107 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
ATG4B-207ENST00000415107 REREQ9P2R6 1566 aa18.4■□□□□ 0.54
ATG4B-207ENST00000415107 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
ATG4B-207ENST00000415107 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
ATG4B-207ENST00000415107 AFAP1Q8N556 730 aa18.38■□□□□ 0.53
ATG4B-207ENST00000415107 ATP7AQ04656 1500 aa18.38■□□□□ 0.53
ATG4B-207ENST00000415107 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
ATG4B-207ENST00000415107 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.534e-7■■■■□ 21.8
ATG4B-207ENST00000415107 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
ATG4B-207ENST00000415107 YEATS2Q9ULM3 1422 aa18.35■□□□□ 0.53
ATG4B-207ENST00000415107 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
ATG4B-207ENST00000415107 ABCC5O15440 1437 aa18.34■□□□□ 0.53
ATG4B-207ENST00000415107 DAPK1P53355 1430 aa18.34■□□□□ 0.53
ATG4B-207ENST00000415107 SPAG9O60271 1321 aaKnown RBP18.33■□□□□ 0.53
ATG4B-207ENST00000415107 PLXNC1O60486 1568 aa18.33■□□□□ 0.52
ATG4B-207ENST00000415107 ATP10AO60312 1499 aa18.33■□□□□ 0.52
ATG4B-207ENST00000415107 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
ATG4B-207ENST00000415107 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
ATG4B-207ENST00000415107 AGLP35573 1532 aa18.3■□□□□ 0.52
ATG4B-207ENST00000415107 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
ATG4B-207ENST00000415107 ADGRL2O95490 1459 aa18.3■□□□□ 0.52
ATG4B-207ENST00000415107 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
ATG4B-207ENST00000415107 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
ATG4B-207ENST00000415107 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
ATG4B-207ENST00000415107 A2MP01023 1474 aa18.25■□□□□ 0.51
ATG4B-207ENST00000415107 SIGLEC1Q9BZZ2 1709 aa18.24■□□□□ 0.51
ATG4B-207ENST00000415107 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
ATG4B-207ENST00000415107 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
ATG4B-207ENST00000415107 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
ATG4B-207ENST00000415107 DHX29Q7Z478 1369 aaKnown RBP18.22■□□□□ 0.51
ATG4B-207ENST00000415107 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
ATG4B-207ENST00000415107 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
ATG4B-207ENST00000415107 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
ATG4B-207ENST00000415107 ANKRD30AQ9BXX3 1397 aa18.2■□□□□ 0.5
ATG4B-207ENST00000415107 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
ATG4B-207ENST00000415107 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
ATG4B-207ENST00000415107 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
ATG4B-207ENST00000415107 ADAMTSL3P82987 1691 aa18.18■□□□□ 0.5
ATG4B-207ENST00000415107 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
ATG4B-207ENST00000415107 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
ATG4B-207ENST00000415107 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
ATG4B-207ENST00000415107 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
ATG4B-207ENST00000415107 GCC2Q8IWJ2 1684 aa18.1■□□□□ 0.49
ATG4B-207ENST00000415107 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
ATG4B-207ENST00000415107 PRDM15P57071 1507 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-207ENST00000415107 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
ATG4B-207ENST00000415107 ANKRD50Q9ULJ7 1429 aa18.09■□□□□ 0.49
ATG4B-207ENST00000415107 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
ATG4B-207ENST00000415107 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.49
ATG4B-207ENST00000415107 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.48
ATG4B-207ENST00000415107 MADDQ8WXG6 1647 aa18.08■□□□□ 0.48
ATG4B-207ENST00000415107 CNTLNQ9NXG0 1405 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms