RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 LRRC9Q6ZRR7 1453 aa16.79■□□□□ 0.28
CRAMP1-203ENST00000415022 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
CRAMP1-203ENST00000415022 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
CRAMP1-203ENST00000415022 RICTORQ6R327 1708 aa16.76■□□□□ 0.27
CRAMP1-203ENST00000415022 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
CRAMP1-203ENST00000415022 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
CRAMP1-203ENST00000415022 FANCAO15360 1455 aa16.76■□□□□ 0.27
CRAMP1-203ENST00000415022 NEO1Q92859 1461 aa16.75■□□□□ 0.27
CRAMP1-203ENST00000415022 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
CRAMP1-203ENST00000415022 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
CRAMP1-203ENST00000415022 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
CRAMP1-203ENST00000415022 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
CRAMP1-203ENST00000415022 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
CRAMP1-203ENST00000415022 AKNAQ7Z591 1439 aa16.73■□□□□ 0.27
CRAMP1-203ENST00000415022 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
CRAMP1-203ENST00000415022 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
CRAMP1-203ENST00000415022 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
CRAMP1-203ENST00000415022 RAPGEF3O95398 923 aa16.69■□□□□ 0.26
CRAMP1-203ENST00000415022 SIGLEC1Q9BZZ2 1709 aa16.69■□□□□ 0.26
CRAMP1-203ENST00000415022 ABCC1P33527 1531 aa16.69■□□□□ 0.26
CRAMP1-203ENST00000415022 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
CRAMP1-203ENST00000415022 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
CRAMP1-203ENST00000415022 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
CRAMP1-203ENST00000415022 PHLDB1Q86UU1 1377 aa16.64■□□□□ 0.26
CRAMP1-203ENST00000415022 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
CRAMP1-203ENST00000415022 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
CRAMP1-203ENST00000415022 POGZQ7Z3K3 1410 aa16.63■□□□□ 0.25
CRAMP1-203ENST00000415022 EFCAB2Q5VUJ9 269 aa16.63■□□□□ 0.25
CRAMP1-203ENST00000415022 ZMYM4Q5VZL5 1548 aa16.63■□□□□ 0.25
CRAMP1-203ENST00000415022 SYCP2Q9BX26 1530 aa16.63■□□□□ 0.25
CRAMP1-203ENST00000415022 DENND4BO75064 1496 aaPredicted RBP16.62■□□□□ 0.25
CRAMP1-203ENST00000415022 KDM5CP41229 1560 aa16.62■□□□□ 0.25
CRAMP1-203ENST00000415022 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
CRAMP1-203ENST00000415022 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
CRAMP1-203ENST00000415022 MBD5Q9P267 1494 aa16.6■□□□□ 0.25
CRAMP1-203ENST00000415022 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
CRAMP1-203ENST00000415022 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
CRAMP1-203ENST00000415022 MYOM3Q5VTT5 1437 aa16.58■□□□□ 0.24
CRAMP1-203ENST00000415022 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
CRAMP1-203ENST00000415022 ARHGEF40Q8TER5 1519 aa16.57■□□□□ 0.24
CRAMP1-203ENST00000415022 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
CRAMP1-203ENST00000415022 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
CRAMP1-203ENST00000415022 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
CRAMP1-203ENST00000415022 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
CRAMP1-203ENST00000415022 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
CRAMP1-203ENST00000415022 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
CRAMP1-203ENST00000415022 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
CRAMP1-203ENST00000415022 ZNF518AQ6AHZ1 1483 aa16.54■□□□□ 0.24
CRAMP1-203ENST00000415022 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
CRAMP1-203ENST00000415022 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
CRAMP1-203ENST00000415022 ZFYVE16Q7Z3T8 1539 aa16.52■□□□□ 0.24
CRAMP1-203ENST00000415022 APLP2Q06481 763 aa16.51■□□□□ 0.23
CRAMP1-203ENST00000415022 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
CRAMP1-203ENST00000415022 PTPRMP28827 1452 aa16.5■□□□□ 0.23
CRAMP1-203ENST00000415022 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
CRAMP1-203ENST00000415022 MLH3Q9UHC1 1453 aa16.5■□□□□ 0.23
CRAMP1-203ENST00000415022 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
CRAMP1-203ENST00000415022 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
CRAMP1-203ENST00000415022 CROCC2H7BZ55 1655 aa16.49■□□□□ 0.23
CRAMP1-203ENST00000415022 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
CRAMP1-203ENST00000415022 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
CRAMP1-203ENST00000415022 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
CRAMP1-203ENST00000415022 ATP7AQ04656 1500 aa16.47■□□□□ 0.23
CRAMP1-203ENST00000415022 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
CRAMP1-203ENST00000415022 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
CRAMP1-203ENST00000415022 CCDC141Q6ZP82 1450 aa16.44■□□□□ 0.22
CRAMP1-203ENST00000415022 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
CRAMP1-203ENST00000415022 ATP10AO60312 1499 aa16.43■□□□□ 0.22
CRAMP1-203ENST00000415022 ABCC5O15440 1437 aa16.43■□□□□ 0.22
CRAMP1-203ENST00000415022 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
CRAMP1-203ENST00000415022 REREQ9P2R6 1566 aa16.43■□□□□ 0.22
CRAMP1-203ENST00000415022 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
CRAMP1-203ENST00000415022 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
CRAMP1-203ENST00000415022 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
CRAMP1-203ENST00000415022 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
CRAMP1-203ENST00000415022 MADDQ8WXG6 1647 aa16.38■□□□□ 0.21
CRAMP1-203ENST00000415022 DAPK1P53355 1430 aa16.38■□□□□ 0.21
CRAMP1-203ENST00000415022 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
CRAMP1-203ENST00000415022 HSPA2P54652 639 aa16.37■□□□□ 0.21
CRAMP1-203ENST00000415022 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
CRAMP1-203ENST00000415022 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
CRAMP1-203ENST00000415022 AGLP35573 1532 aa16.35■□□□□ 0.21
CRAMP1-203ENST00000415022 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
CRAMP1-203ENST00000415022 A2MP01023 1474 aa16.34■□□□□ 0.21
CRAMP1-203ENST00000415022 RIMS1Q86UR5 1692 aaKnown RBP16.33■□□□□ 0.2
CRAMP1-203ENST00000415022 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
CRAMP1-203ENST00000415022 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
CRAMP1-203ENST00000415022 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
CRAMP1-203ENST00000415022 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
CRAMP1-203ENST00000415022 MYT1LQ9UL68 1186 aa16.29■□□□□ 0.2
CRAMP1-203ENST00000415022 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
CRAMP1-203ENST00000415022 DHX29Q7Z478 1369 aaKnown RBP16.28■□□□□ 0.2
CRAMP1-203ENST00000415022 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
CRAMP1-203ENST00000415022 MLECQ14165 292 aa16.28■□□□□ 0.2
CRAMP1-203ENST00000415022 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
CRAMP1-203ENST00000415022 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
CRAMP1-203ENST00000415022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
CRAMP1-203ENST00000415022 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
CRAMP1-203ENST00000415022 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
CRAMP1-203ENST00000415022 TSPY4P0CV99 314 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms