RNA–Protein interactions for RNA: ENST00000414906.5

ZNF490-202, Transcript of zinc finger protein 490, humanhuman

TSL 3

Gene ZNF490, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-202ENST00000414906 SPATA31D1Q6ZQQ2 1576 aa16.9■□□□□ 0.3
ZNF490-202ENST00000414906 KIF14Q15058 1648 aa16.88■□□□□ 0.29
ZNF490-202ENST00000414906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.29
ZNF490-202ENST00000414906 ABCA9Q8IUA7 1624 aa16.85■□□□□ 0.29
ZNF490-202ENST00000414906 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
ZNF490-202ENST00000414906 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
ZNF490-202ENST00000414906 TTC37Q6PGP7 1564 aa16.82■□□□□ 0.28
ZNF490-202ENST00000414906 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
ZNF490-202ENST00000414906 HSPA2P54652 639 aa16.81■□□□□ 0.28
ZNF490-202ENST00000414906 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
ZNF490-202ENST00000414906 PLCH2O75038 1416 aa16.79■□□□□ 0.28
ZNF490-202ENST00000414906 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
ZNF490-202ENST00000414906 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
ZNF490-202ENST00000414906 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
ZNF490-202ENST00000414906 MADDQ8WXG6 1647 aa16.75■□□□□ 0.27
ZNF490-202ENST00000414906 MYO5CQ9NQX4 1742 aa16.75■□□□□ 0.27
ZNF490-202ENST00000414906 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
ZNF490-202ENST00000414906 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
ZNF490-202ENST00000414906 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
ZNF490-202ENST00000414906 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
ZNF490-202ENST00000414906 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
ZNF490-202ENST00000414906 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
ZNF490-202ENST00000414906 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
ZNF490-202ENST00000414906 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
ZNF490-202ENST00000414906 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
ZNF490-202ENST00000414906 FANCAO15360 1455 aa16.71■□□□□ 0.27
ZNF490-202ENST00000414906 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
ZNF490-202ENST00000414906 NEO1Q92859 1461 aa16.7■□□□□ 0.26
ZNF490-202ENST00000414906 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
ZNF490-202ENST00000414906 FOXD1Q16676 465 aa16.68■□□□□ 0.26
ZNF490-202ENST00000414906 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
ZNF490-202ENST00000414906 FGD6Q6ZV73 1430 aa16.67■□□□□ 0.26
ZNF490-202ENST00000414906 AKNAQ7Z591 1439 aa16.67■□□□□ 0.26
ZNF490-202ENST00000414906 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
ZNF490-202ENST00000414906 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
ZNF490-202ENST00000414906 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
ZNF490-202ENST00000414906 PLEKHH2Q8IVE3 1493 aa16.63■□□□□ 0.25
ZNF490-202ENST00000414906 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
ZNF490-202ENST00000414906 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
ZNF490-202ENST00000414906 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
ZNF490-202ENST00000414906 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
ZNF490-202ENST00000414906 ABCC1P33527 1531 aa16.61■□□□□ 0.25
ZNF490-202ENST00000414906 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
ZNF490-202ENST00000414906 PTPN23Q9H3S7 1636 aa16.6■□□□□ 0.25
ZNF490-202ENST00000414906 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
ZNF490-202ENST00000414906 ARHGEF12Q9NZN5 1544 aa16.59■□□□□ 0.25
ZNF490-202ENST00000414906 HNRNPMP52272 730 aaKnown RBP eCLIP16.58■□□□□ 0.24
ZNF490-202ENST00000414906 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
ZNF490-202ENST00000414906 DENND4BO75064 1496 aaPredicted RBP16.58■□□□□ 0.24
ZNF490-202ENST00000414906 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
ZNF490-202ENST00000414906 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
ZNF490-202ENST00000414906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
ZNF490-202ENST00000414906 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
ZNF490-202ENST00000414906 STRCQ7RTU9 1775 aa16.56■□□□□ 0.24
ZNF490-202ENST00000414906 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
ZNF490-202ENST00000414906 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
ZNF490-202ENST00000414906 POGZQ7Z3K3 1410 aa16.55■□□□□ 0.24
ZNF490-202ENST00000414906 TRAPPC8Q9Y2L5 1435 aa16.55■□□□□ 0.24
ZNF490-202ENST00000414906 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
ZNF490-202ENST00000414906 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
ZNF490-202ENST00000414906 ARHGEF5Q12774 1597 aa16.54■□□□□ 0.24
ZNF490-202ENST00000414906 ZNF518AQ6AHZ1 1483 aa16.54■□□□□ 0.24
ZNF490-202ENST00000414906 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
ZNF490-202ENST00000414906 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.23
ZNF490-202ENST00000414906 RICTORQ6R327 1708 aa16.51■□□□□ 0.23
ZNF490-202ENST00000414906 ABCC5O15440 1437 aa16.5■□□□□ 0.23
ZNF490-202ENST00000414906 KDM5CP41229 1560 aa16.5■□□□□ 0.23
ZNF490-202ENST00000414906 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
ZNF490-202ENST00000414906 DNMT1P26358 1616 aaKnown RBP16.49■□□□□ 0.23
ZNF490-202ENST00000414906 DAPK1P53355 1430 aa16.49■□□□□ 0.23
ZNF490-202ENST00000414906 YEATS2Q9ULM3 1422 aa16.49■□□□□ 0.23
ZNF490-202ENST00000414906 TSPY4P0CV99 314 aa16.48■□□□□ 0.23
ZNF490-202ENST00000414906 TSPY10P0CW01 314 aa16.48■□□□□ 0.23
ZNF490-202ENST00000414906 ZMYM4Q5VZL5 1548 aa16.48■□□□□ 0.23
ZNF490-202ENST00000414906 SPAG9O60271 1321 aaKnown RBP16.47■□□□□ 0.23
ZNF490-202ENST00000414906 LTBP4Q8N2S1 1624 aa16.47■□□□□ 0.23
ZNF490-202ENST00000414906 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
ZNF490-202ENST00000414906 MAGI2Q86UL8 1455 aa16.46■□□□□ 0.23
ZNF490-202ENST00000414906 SHANK2Q9UPX8 1470 aa16.46■□□□□ 0.23
ZNF490-202ENST00000414906 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
ZNF490-202ENST00000414906 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
ZNF490-202ENST00000414906 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
ZNF490-202ENST00000414906 MAST1Q9Y2H9 1570 aa16.44■□□□□ 0.22
ZNF490-202ENST00000414906 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
ZNF490-202ENST00000414906 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
ZNF490-202ENST00000414906 INO80Q9ULG1 1556 aaPredicted RBP16.43■□□□□ 0.22
ZNF490-202ENST00000414906 ITGAEP38570 1179 aa16.43■□□□□ 0.22
ZNF490-202ENST00000414906 ZFYVE16Q7Z3T8 1539 aa16.43■□□□□ 0.22
ZNF490-202ENST00000414906 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
ZNF490-202ENST00000414906 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
ZNF490-202ENST00000414906 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
ZNF490-202ENST00000414906 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
ZNF490-202ENST00000414906 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
ZNF490-202ENST00000414906 CHIC2Q9UKJ5 165 aa16.4■□□□□ 0.22
ZNF490-202ENST00000414906 ADGRL2O95490 1459 aa16.4■□□□□ 0.22
ZNF490-202ENST00000414906 IQSEC2Q5JU85 1478 aa16.4■□□□□ 0.22
ZNF490-202ENST00000414906 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
ZNF490-202ENST00000414906 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
ZNF490-202ENST00000414906 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
ZNF490-202ENST00000414906 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms