RNA–Protein interactions for RNA: ENST00000414600.1

SOX9-AS1-202, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 742 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-202ENST00000414600 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
SOX9-AS1-202ENST00000414600 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
SOX9-AS1-202ENST00000414600 PYGBP11216 843 aa11.85□□□□□ -0.51
SOX9-AS1-202ENST00000414600 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
SOX9-AS1-202ENST00000414600 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
SOX9-AS1-202ENST00000414600 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
SOX9-AS1-202ENST00000414600 MYT1LQ9UL68 1186 aa11.81□□□□□ -0.52
SOX9-AS1-202ENST00000414600 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
SOX9-AS1-202ENST00000414600 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
SOX9-AS1-202ENST00000414600 CCDC9Q9Y3X0 531 aaKnown RBP11.79□□□□□ -0.52
SOX9-AS1-202ENST00000414600 ERBB3P21860 1342 aa11.79□□□□□ -0.52
SOX9-AS1-202ENST00000414600 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
SOX9-AS1-202ENST00000414600 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
SOX9-AS1-202ENST00000414600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
SOX9-AS1-202ENST00000414600 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
SOX9-AS1-202ENST00000414600 SHROOM4Q9ULL8 1493 aa11.75□□□□□ -0.53
SOX9-AS1-202ENST00000414600 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
SOX9-AS1-202ENST00000414600 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
SOX9-AS1-202ENST00000414600 PKD2Q13563 968 aa11.73□□□□□ -0.53
SOX9-AS1-202ENST00000414600 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
SOX9-AS1-202ENST00000414600 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
SOX9-AS1-202ENST00000414600 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
SOX9-AS1-202ENST00000414600 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
SOX9-AS1-202ENST00000414600 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
SOX9-AS1-202ENST00000414600 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
SOX9-AS1-202ENST00000414600 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
SOX9-AS1-202ENST00000414600 G3V3G9 751 aa11.63□□□□□ -0.55
SOX9-AS1-202ENST00000414600 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
SOX9-AS1-202ENST00000414600 PTGER2P43116 358 aa11.62□□□□□ -0.55
SOX9-AS1-202ENST00000414600 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
SOX9-AS1-202ENST00000414600 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
SOX9-AS1-202ENST00000414600 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
SOX9-AS1-202ENST00000414600 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
SOX9-AS1-202ENST00000414600 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
SOX9-AS1-202ENST00000414600 PSEN1P49768 467 aa11.58□□□□□ -0.56
SOX9-AS1-202ENST00000414600 IGSF3O75054 1194 aa11.57□□□□□ -0.56
SOX9-AS1-202ENST00000414600 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
SOX9-AS1-202ENST00000414600 PDIA4P13667 645 aaKnown RBP11.53□□□□□ -0.56
SOX9-AS1-202ENST00000414600 BRPF1P55201 1214 aaPredicted RBP11.52□□□□□ -0.57
SOX9-AS1-202ENST00000414600 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
SOX9-AS1-202ENST00000414600 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
SOX9-AS1-202ENST00000414600 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
SOX9-AS1-202ENST00000414600 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
SOX9-AS1-202ENST00000414600 GSE1Q14687 1217 aa11.48□□□□□ -0.57
SOX9-AS1-202ENST00000414600 ZMYND15Q9H091 742 aa11.48□□□□□ -0.57
SOX9-AS1-202ENST00000414600 ZSWIM6Q9HCJ5 1215 aa11.48□□□□□ -0.57
SOX9-AS1-202ENST00000414600 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
SOX9-AS1-202ENST00000414600 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
SOX9-AS1-202ENST00000414600 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
SOX9-AS1-202ENST00000414600 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
SOX9-AS1-202ENST00000414600 PDAP1Q13442 181 aaKnown RBP11.44□□□□□ -0.58
SOX9-AS1-202ENST00000414600 RB1CC1Q8TDY2 1594 aa11.43□□□□□ -0.58
SOX9-AS1-202ENST00000414600 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
SOX9-AS1-202ENST00000414600 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
SOX9-AS1-202ENST00000414600 UBE2Q2Q8WVN8 375 aa11.4□□□□□ -0.58
SOX9-AS1-202ENST00000414600 ARID3AQ99856 593 aa11.4□□□□□ -0.58
SOX9-AS1-202ENST00000414600 BRD2P25440 801 aaKnown RBP11.39□□□□□ -0.59
SOX9-AS1-202ENST00000414600 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
SOX9-AS1-202ENST00000414600 NACADO15069 1562 aa11.37□□□□□ -0.59
SOX9-AS1-202ENST00000414600 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
SOX9-AS1-202ENST00000414600 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
SOX9-AS1-202ENST00000414600 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
SOX9-AS1-202ENST00000414600 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
SOX9-AS1-202ENST00000414600 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
SOX9-AS1-202ENST00000414600 C1orf115Q9H7X2 142 aa11.3□□□□□ -0.6
SOX9-AS1-202ENST00000414600 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
SOX9-AS1-202ENST00000414600 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
SOX9-AS1-202ENST00000414600 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
SOX9-AS1-202ENST00000414600 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
SOX9-AS1-202ENST00000414600 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
SOX9-AS1-202ENST00000414600 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
SOX9-AS1-202ENST00000414600 PBX2P40425 430 aa11.22□□□□□ -0.61
SOX9-AS1-202ENST00000414600 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-202ENST00000414600 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
SOX9-AS1-202ENST00000414600 RAD21O60216 631 aa11.21□□□□□ -0.61
SOX9-AS1-202ENST00000414600 DHX37Q8IY37 1157 aaKnown RBP11.21□□□□□ -0.61
SOX9-AS1-202ENST00000414600 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
SOX9-AS1-202ENST00000414600 RGL2O15211 777 aa11.18□□□□□ -0.62
SOX9-AS1-202ENST00000414600 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
SOX9-AS1-202ENST00000414600 TAF7LQ5H9L4 462 aa11.17□□□□□ -0.62
SOX9-AS1-202ENST00000414600 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
SOX9-AS1-202ENST00000414600 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
SOX9-AS1-202ENST00000414600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
SOX9-AS1-202ENST00000414600 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.62
SOX9-AS1-202ENST00000414600 PDE4CQ08493 712 aa11.14□□□□□ -0.63
SOX9-AS1-202ENST00000414600 BCL11AQ9H165 835 aa11.13□□□□□ -0.63
SOX9-AS1-202ENST00000414600 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
SOX9-AS1-202ENST00000414600 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
SOX9-AS1-202ENST00000414600 DCAF1Q9Y4B6 1507 aa11.1□□□□□ -0.63
SOX9-AS1-202ENST00000414600 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
SOX9-AS1-202ENST00000414600 MTMR7Q9Y216 660 aa11.1□□□□□ -0.63
SOX9-AS1-202ENST00000414600 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
SOX9-AS1-202ENST00000414600 APBB1O00213 710 aa11.09□□□□□ -0.63
SOX9-AS1-202ENST00000414600 ADGRD1Q6QNK2 874 aa11.09□□□□□ -0.63
SOX9-AS1-202ENST00000414600 NUDT7P0C024 238 aa11.08□□□□□ -0.64
SOX9-AS1-202ENST00000414600 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
SOX9-AS1-202ENST00000414600 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
SOX9-AS1-202ENST00000414600 RGS20O76081 388 aa11.06□□□□□ -0.64
SOX9-AS1-202ENST00000414600 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
SOX9-AS1-202ENST00000414600 FAM9AQ8IZU1 332 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms