RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 GPATCH8Q9UKJ3 1502 aaKnown RBP15.25■□□□□ 0.03
DDB1-202ENST00000414411 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
DDB1-202ENST00000414411 PLCH2O75038 1416 aa15.22■□□□□ 0.03
DDB1-202ENST00000414411 MAP3K4Q9Y6R4 1608 aa15.22■□□□□ 0.03
DDB1-202ENST00000414411 CDC42BPAQ5VT25 1732 aa15.22■□□□□ 0.03
DDB1-202ENST00000414411 MYOM3Q5VTT5 1437 aa15.22■□□□□ 0.03
DDB1-202ENST00000414411 CD109Q6YHK3 1445 aa15.22■□□□□ 0.03
DDB1-202ENST00000414411 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
DDB1-202ENST00000414411 CDC42BPBQ9Y5S2 1711 aa15.2■□□□□ 0.02
DDB1-202ENST00000414411 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
DDB1-202ENST00000414411 PREX2Q70Z35 1606 aa15.19■□□□□ 0.02
DDB1-202ENST00000414411 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
DDB1-202ENST00000414411 MIA2Q96PC5 1412 aa15.18■□□□□ 0.02
DDB1-202ENST00000414411 ITSN2Q9NZM3 1697 aa15.18■□□□□ 0.02
DDB1-202ENST00000414411 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
DDB1-202ENST00000414411 FGD6Q6ZV73 1430 aa15.17■□□□□ 0.02
DDB1-202ENST00000414411 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
DDB1-202ENST00000414411 PPRC1Q5VV67 1664 aaKnown RBP15.16■□□□□ 0.02
DDB1-202ENST00000414411 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
DDB1-202ENST00000414411 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
DDB1-202ENST00000414411 ZNF644Q9H582 1327 aaPredicted RBP15.14■□□□□ 0.01
DDB1-202ENST00000414411 FANCAO15360 1455 aa15.14■□□□□ 0.01
DDB1-202ENST00000414411 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
DDB1-202ENST00000414411 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
DDB1-202ENST00000414411 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
DDB1-202ENST00000414411 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
DDB1-202ENST00000414411 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
DDB1-202ENST00000414411 NEO1Q92859 1461 aa15.11■□□□□ 0.01
DDB1-202ENST00000414411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDB1-202ENST00000414411 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
DDB1-202ENST00000414411 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
DDB1-202ENST00000414411 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
DDB1-202ENST00000414411 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
DDB1-202ENST00000414411 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0
DDB1-202ENST00000414411 MBD5Q9P267 1494 aa15.07■□□□□ 0
DDB1-202ENST00000414411 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
DDB1-202ENST00000414411 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
DDB1-202ENST00000414411 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
DDB1-202ENST00000414411 FAM50AQ14320 339 aaKnown RBP15.07■□□□□ 0
DDB1-202ENST00000414411 ABCC1P33527 1531 aa15.06■□□□□ 0
DDB1-202ENST00000414411 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
DDB1-202ENST00000414411 ADGRL1O94910 1474 aa15.06■□□□□ 0
DDB1-202ENST00000414411 SCAPERQ9BY12 1400 aa15.05■□□□□ 0
DDB1-202ENST00000414411 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
DDB1-202ENST00000414411 SYCP2Q9BX26 1530 aa15.04■□□□□ -0
DDB1-202ENST00000414411 ARHGEF5Q12774 1597 aa15.02■□□□□ -0
DDB1-202ENST00000414411 TRAPPC8Q9Y2L5 1435 aa15.02■□□□□ -0
DDB1-202ENST00000414411 COL17A1Q9UMD9 1497 aaPredicted RBP15.02□□□□□ -0.01
DDB1-202ENST00000414411 ABCC5O15440 1437 aa15.02□□□□□ -0.01
DDB1-202ENST00000414411 AFAP1Q8N556 730 aa15.02□□□□□ -0.01
DDB1-202ENST00000414411 DNMT1P26358 1616 aaKnown RBP15.01□□□□□ -0.01
DDB1-202ENST00000414411 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
DDB1-202ENST00000414411 DAPK1P53355 1430 aa15□□□□□ -0.01
DDB1-202ENST00000414411 RAPGEF3O95398 923 aa15□□□□□ -0.01
DDB1-202ENST00000414411 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
DDB1-202ENST00000414411 POGZQ7Z3K3 1410 aa14.99□□□□□ -0.01
DDB1-202ENST00000414411 CCDC141Q6ZP82 1450 aa14.99□□□□□ -0.01
DDB1-202ENST00000414411 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
DDB1-202ENST00000414411 RICTORQ6R327 1708 aa14.98□□□□□ -0.01
DDB1-202ENST00000414411 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
DDB1-202ENST00000414411 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
DDB1-202ENST00000414411 ITGAEP38570 1179 aa14.96□□□□□ -0.01
DDB1-202ENST00000414411 KDM5CP41229 1560 aa14.96□□□□□ -0.01
DDB1-202ENST00000414411 FRMPD1Q5SYB0 1578 aa14.95□□□□□ -0.02
DDB1-202ENST00000414411 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
DDB1-202ENST00000414411 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
DDB1-202ENST00000414411 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
DDB1-202ENST00000414411 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
DDB1-202ENST00000414411 C9orf84Q5VXU9 1444 aa14.93□□□□□ -0.02
DDB1-202ENST00000414411 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
DDB1-202ENST00000414411 MLH3Q9UHC1 1453 aa14.93□□□□□ -0.02
DDB1-202ENST00000414411 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
DDB1-202ENST00000414411 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
DDB1-202ENST00000414411 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
DDB1-202ENST00000414411 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
DDB1-202ENST00000414411 KDM6BO15054 1643 aa14.91□□□□□ -0.02
DDB1-202ENST00000414411 ADGRL2O95490 1459 aa14.91□□□□□ -0.02
DDB1-202ENST00000414411 ROCK1Q13464 1354 aa14.91□□□□□ -0.02
DDB1-202ENST00000414411 INO80Q9ULG1 1556 aaPredicted RBP14.91□□□□□ -0.02
DDB1-202ENST00000414411 KIDINS220Q9ULH0 1771 aa14.91□□□□□ -0.02
DDB1-202ENST00000414411 ZFYVE16Q7Z3T8 1539 aa14.9□□□□□ -0.02
DDB1-202ENST00000414411 MAGI2Q86UL8 1455 aa14.9□□□□□ -0.02
DDB1-202ENST00000414411 ATP7AQ04656 1500 aa14.89□□□□□ -0.03
DDB1-202ENST00000414411 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
DDB1-202ENST00000414411 HECW2Q9P2P5 1572 aa14.88□□□□□ -0.03
DDB1-202ENST00000414411 ANKRD30AQ9BXX3 1397 aa14.88□□□□□ -0.03
DDB1-202ENST00000414411 ADGBQ8N7X0 1667 aa14.87□□□□□ -0.03
DDB1-202ENST00000414411 RRP7BPQ9NSQ0 103 aa14.87□□□□□ -0.03
DDB1-202ENST00000414411 PLXNC1O60486 1568 aa14.87□□□□□ -0.03
DDB1-202ENST00000414411 YEATS2Q9ULM3 1422 aa14.86□□□□□ -0.03
DDB1-202ENST00000414411 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
DDB1-202ENST00000414411 HFM1A2PYH4 1435 aa14.85□□□□□ -0.03
DDB1-202ENST00000414411 NAIPQ13075 1403 aa14.85□□□□□ -0.03
DDB1-202ENST00000414411 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
DDB1-202ENST00000414411 MYT1LQ9UL68 1186 aa14.84□□□□□ -0.03
DDB1-202ENST00000414411 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
DDB1-202ENST00000414411 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
DDB1-202ENST00000414411 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
DDB1-202ENST00000414411 ATP10AO60312 1499 aa14.82□□□□□ -0.04
DDB1-202ENST00000414411 DUOX2Q9NRD8 1548 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms