RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
SCN5A-204ENST00000414099 CLSTN1O94985 981 aa13.48□□□□□ -0.25
SCN5A-204ENST00000414099 IPO8O15397 1037 aaKnown RBP13.48□□□□□ -0.25
SCN5A-204ENST00000414099 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
SCN5A-204ENST00000414099 EID1Q9Y6B2 187 aa13.48□□□□□ -0.25
SCN5A-204ENST00000414099 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
SCN5A-204ENST00000414099 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
SCN5A-204ENST00000414099 NEUROD2Q15784 382 aa13.47□□□□□ -0.25
SCN5A-204ENST00000414099 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
SCN5A-204ENST00000414099 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
SCN5A-204ENST00000414099 MLECQ14165 292 aa13.47□□□□□ -0.25
SCN5A-204ENST00000414099 NOC3LQ8WTT2 800 aaKnown RBP13.47□□□□□ -0.25
SCN5A-204ENST00000414099 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
SCN5A-204ENST00000414099 SYAP1Q96A49 352 aaPredicted RBP13.46□□□□□ -0.26
SCN5A-204ENST00000414099 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
SCN5A-204ENST00000414099 KIAA1211Q6ZU35 1233 aa13.45□□□□□ -0.26
SCN5A-204ENST00000414099 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
SCN5A-204ENST00000414099 FRAT1Q92837 279 aaPredicted RBP13.44□□□□□ -0.26
SCN5A-204ENST00000414099 GPATCH3Q96I76 525 aa13.44□□□□□ -0.26
SCN5A-204ENST00000414099 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
SCN5A-204ENST00000414099 HIRIP3Q9BW71 556 aaPredicted RBP13.43□□□□□ -0.26
SCN5A-204ENST00000414099 ISY1Q9ULR0 285 aaKnown RBP13.43□□□□□ -0.26
SCN5A-204ENST00000414099 CSPP1Q1MSJ5 1256 aa13.43□□□□□ -0.26
SCN5A-204ENST00000414099 GOLGA6L1Q8N7Z2 621 aa13.43□□□□□ -0.26
SCN5A-204ENST00000414099 EFCAB2Q5VUJ9 269 aa13.42□□□□□ -0.26
SCN5A-204ENST00000414099 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
SCN5A-204ENST00000414099 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
SCN5A-204ENST00000414099 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
SCN5A-204ENST00000414099 CC2D1BQ5T0F9 858 aaKnown RBP13.42□□□□□ -0.26
SCN5A-204ENST00000414099 MIER1Q8N108 512 aa13.41□□□□□ -0.26
SCN5A-204ENST00000414099 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
SCN5A-204ENST00000414099 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
SCN5A-204ENST00000414099 CCDC18Q5T9S5 1454 aa13.39□□□□□ -0.27
SCN5A-204ENST00000414099 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
SCN5A-204ENST00000414099 G3V3G9 751 aa13.39□□□□□ -0.27
SCN5A-204ENST00000414099 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
SCN5A-204ENST00000414099 GGT6Q6P531 493 aa13.39□□□□□ -0.27
SCN5A-204ENST00000414099 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
SCN5A-204ENST00000414099 SOGA1O94964 1423 aa13.37□□□□□ -0.27
SCN5A-204ENST00000414099 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
SCN5A-204ENST00000414099 SUPT16HQ9Y5B9 1047 aaKnown RBP13.36□□□□□ -0.27
SCN5A-204ENST00000414099 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
SCN5A-204ENST00000414099 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
SCN5A-204ENST00000414099 RGS3P49796 1198 aa13.36□□□□□ -0.27
SCN5A-204ENST00000414099 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
SCN5A-204ENST00000414099 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
SCN5A-204ENST00000414099 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
SCN5A-204ENST00000414099 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
SCN5A-204ENST00000414099 SOX12O15370 315 aa13.34□□□□□ -0.27
SCN5A-204ENST00000414099 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
SCN5A-204ENST00000414099 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
SCN5A-204ENST00000414099 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
SCN5A-204ENST00000414099 PRDM2Q13029 1718 aa13.33□□□□□ -0.27
SCN5A-204ENST00000414099 A0A0U1RQG5 324 aaPredicted RBP13.33□□□□□ -0.27
SCN5A-204ENST00000414099 STK26Q9P289 416 aa13.33□□□□□ -0.28
SCN5A-204ENST00000414099 PHF14O94880 888 aa13.33□□□□□ -0.28
SCN5A-204ENST00000414099 SETQ01105 290 aaPredicted RBP13.32□□□□□ -0.28
SCN5A-204ENST00000414099 TNNT3P45378 269 aaPredicted RBP13.32□□□□□ -0.28
SCN5A-204ENST00000414099 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
SCN5A-204ENST00000414099 RALBP1Q15311 655 aa13.31□□□□□ -0.28
SCN5A-204ENST00000414099 HMMRO75330 724 aa13.31□□□□□ -0.28
SCN5A-204ENST00000414099 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
SCN5A-204ENST00000414099 PRM3Q9NNZ6 103 aa13.29□□□□□ -0.28
SCN5A-204ENST00000414099 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN5A-204ENST00000414099 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
SCN5A-204ENST00000414099 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
SCN5A-204ENST00000414099 PHLDB1Q86UU1 1377 aa13.28□□□□□ -0.28
SCN5A-204ENST00000414099 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
SCN5A-204ENST00000414099 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
SCN5A-204ENST00000414099 NUP155O75694 1391 aa13.27□□□□□ -0.28
SCN5A-204ENST00000414099 WASHC2CQ9Y4E1 1318 aa13.27□□□□□ -0.29
SCN5A-204ENST00000414099 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.29
SCN5A-204ENST00000414099 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.29
SCN5A-204ENST00000414099 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.29
SCN5A-204ENST00000414099 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
SCN5A-204ENST00000414099 PKD2Q13563 968 aa13.27□□□□□ -0.29
SCN5A-204ENST00000414099 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
SCN5A-204ENST00000414099 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
SCN5A-204ENST00000414099 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
SCN5A-204ENST00000414099 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
SCN5A-204ENST00000414099 TPM3P06753 285 aa13.26□□□□□ -0.29
SCN5A-204ENST00000414099 U2AF1L5P0DN76 240 aaPredicted RBP13.25□□□□□ -0.29
SCN5A-204ENST00000414099 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCN5A-204ENST00000414099 GTF2E1P29083 439 aaPredicted RBP13.25□□□□□ -0.29
SCN5A-204ENST00000414099 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
SCN5A-204ENST00000414099 AMPHP49418 695 aa13.24□□□□□ -0.29
SCN5A-204ENST00000414099 WIZO95785 1651 aa13.23□□□□□ -0.29
SCN5A-204ENST00000414099 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
SCN5A-204ENST00000414099 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
SCN5A-204ENST00000414099 CCDC70Q6NSX1 233 aa13.22□□□□□ -0.29
SCN5A-204ENST00000414099 TPM2P07951 284 aa13.22□□□□□ -0.29
SCN5A-204ENST00000414099 KIF3BO15066 747 aa13.22□□□□□ -0.29
SCN5A-204ENST00000414099 EVA1CP58658 441 aa13.21□□□□□ -0.29
SCN5A-204ENST00000414099 FRAT2O75474 233 aaPredicted RBP13.21□□□□□ -0.29
SCN5A-204ENST00000414099 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
SCN5A-204ENST00000414099 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
SCN5A-204ENST00000414099 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
SCN5A-204ENST00000414099 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
SCN5A-204ENST00000414099 ITPRIPQ8IWB1 547 aa13.2□□□□□ -0.3
SCN5A-204ENST00000414099 GPS2Q13227 327 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms