RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 FANCAO15360 1455 aa16.18■□□□□ 0.18
HLA-DMB-257ENST00000414017 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
HLA-DMB-257ENST00000414017 CFDP1Q9UEE9 299 aaPredicted RBP16.17■□□□□ 0.18
HLA-DMB-257ENST00000414017 GPATCH8Q9UKJ3 1502 aaKnown RBP16.16■□□□□ 0.18
HLA-DMB-257ENST00000414017 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
HLA-DMB-257ENST00000414017 PREX2Q70Z35 1606 aa16.16■□□□□ 0.18
HLA-DMB-257ENST00000414017 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
HLA-DMB-257ENST00000414017 AKNAQ7Z591 1439 aa16.14■□□□□ 0.17
HLA-DMB-257ENST00000414017 KDM6BO15054 1643 aa16.14■□□□□ 0.17
HLA-DMB-257ENST00000414017 CFAP74Q9C0B2 1584 aa16.13■□□□□ 0.17
HLA-DMB-257ENST00000414017 NEO1Q92859 1461 aa16.13■□□□□ 0.17
HLA-DMB-257ENST00000414017 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
HLA-DMB-257ENST00000414017 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
HLA-DMB-257ENST00000414017 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
HLA-DMB-257ENST00000414017 ARAP3Q8WWN8 1544 aa16.1■□□□□ 0.17
HLA-DMB-257ENST00000414017 RAPGEF3O95398 923 aa16.1■□□□□ 0.17
HLA-DMB-257ENST00000414017 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
HLA-DMB-257ENST00000414017 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
HLA-DMB-257ENST00000414017 MYOM3Q5VTT5 1437 aa16.09■□□□□ 0.17
HLA-DMB-257ENST00000414017 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
HLA-DMB-257ENST00000414017 MYT1LQ9UL68 1186 aa16.08■□□□□ 0.16
HLA-DMB-257ENST00000414017 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.16
HLA-DMB-257ENST00000414017 DENND4BO75064 1496 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMB-257ENST00000414017 SAMD9LQ8IVG5 1584 aa16.06■□□□□ 0.16
HLA-DMB-257ENST00000414017 FAM50AQ14320 339 aaKnown RBP16.05■□□□□ 0.16
HLA-DMB-257ENST00000414017 ABCC1P33527 1531 aa16.04■□□□□ 0.16
HLA-DMB-257ENST00000414017 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
HLA-DMB-257ENST00000414017 CAMSAP2Q08AD1 1489 aa16.04■□□□□ 0.16
HLA-DMB-257ENST00000414017 AFAP1Q8N556 730 aa16.03■□□□□ 0.16
HLA-DMB-257ENST00000414017 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.16
HLA-DMB-257ENST00000414017 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
HLA-DMB-257ENST00000414017 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.15
HLA-DMB-257ENST00000414017 POGZQ7Z3K3 1410 aa16.02■□□□□ 0.15
HLA-DMB-257ENST00000414017 MIA2Q96PC5 1412 aa16.02■□□□□ 0.15
HLA-DMB-257ENST00000414017 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.15
HLA-DMB-257ENST00000414017 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
HLA-DMB-257ENST00000414017 FRMPD1Q5SYB0 1578 aa16■□□□□ 0.15
HLA-DMB-257ENST00000414017 RICTORQ6R327 1708 aa15.99■□□□□ 0.15
HLA-DMB-257ENST00000414017 ZNF518AQ6AHZ1 1483 aa15.98■□□□□ 0.15
HLA-DMB-257ENST00000414017 KIAA1107Q9UPP5 1409 aa15.98■□□□□ 0.15
HLA-DMB-257ENST00000414017 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.15
HLA-DMB-257ENST00000414017 ITGAEP38570 1179 aa15.96■□□□□ 0.15
HLA-DMB-257ENST00000414017 TSPY4P0CV99 314 aa15.94■□□□□ 0.14
HLA-DMB-257ENST00000414017 TSPY10P0CW01 314 aa15.94■□□□□ 0.14
HLA-DMB-257ENST00000414017 CCDC141Q6ZP82 1450 aa15.94■□□□□ 0.14
HLA-DMB-257ENST00000414017 MBD5Q9P267 1494 aa15.94■□□□□ 0.14
HLA-DMB-257ENST00000414017 TCOF1Q13428 1488 aaKnown RBP15.93■□□□□ 0.14
HLA-DMB-257ENST00000414017 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
HLA-DMB-257ENST00000414017 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
HLA-DMB-257ENST00000414017 ZMYM4Q5VZL5 1548 aa15.92■□□□□ 0.14
HLA-DMB-257ENST00000414017 ZFYVE16Q7Z3T8 1539 aa15.92■□□□□ 0.14
HLA-DMB-257ENST00000414017 KDM5CP41229 1560 aa15.92■□□□□ 0.14
HLA-DMB-257ENST00000414017 HECW2Q9P2P5 1572 aa15.92■□□□□ 0.14
HLA-DMB-257ENST00000414017 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
HLA-DMB-257ENST00000414017 ARHGEF5Q12774 1597 aa15.91■□□□□ 0.14
HLA-DMB-257ENST00000414017 ARID4BQ4LE39 1312 aaPredicted RBP15.9■□□□□ 0.14
HLA-DMB-257ENST00000414017 DAPK1P53355 1430 aa15.89■□□□□ 0.13
HLA-DMB-257ENST00000414017 ATP7AQ04656 1500 aa15.89■□□□□ 0.13
HLA-DMB-257ENST00000414017 ABCC5O15440 1437 aa15.88■□□□□ 0.13
HLA-DMB-257ENST00000414017 MAGI2Q86UL8 1455 aa15.88■□□□□ 0.13
HLA-DMB-257ENST00000414017 MLH3Q9UHC1 1453 aa15.88■□□□□ 0.13
HLA-DMB-257ENST00000414017 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
HLA-DMB-257ENST00000414017 C9orf84Q5VXU9 1444 aa15.87■□□□□ 0.13
HLA-DMB-257ENST00000414017 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
HLA-DMB-257ENST00000414017 DNMT1P26358 1616 aaKnown RBP15.86■□□□□ 0.13
HLA-DMB-257ENST00000414017 KIDINS220Q9ULH0 1771 aa15.86■□□□□ 0.13
HLA-DMB-257ENST00000414017 ABCA6Q8N139 1617 aa15.86■□□□□ 0.13
HLA-DMB-257ENST00000414017 INO80Q9ULG1 1556 aaPredicted RBP15.85■□□□□ 0.13
HLA-DMB-257ENST00000414017 ATP10AO60312 1499 aa15.84■□□□□ 0.13
HLA-DMB-257ENST00000414017 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
HLA-DMB-257ENST00000414017 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
HLA-DMB-257ENST00000414017 MLECQ14165 292 aa15.84■□□□□ 0.13
HLA-DMB-257ENST00000414017 RRP7BPQ9NSQ0 103 aa15.84■□□□□ 0.13
HLA-DMB-257ENST00000414017 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.12
HLA-DMB-257ENST00000414017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.81■□□□□ 0.12
HLA-DMB-257ENST00000414017 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
HLA-DMB-257ENST00000414017 MAST1Q9Y2H9 1570 aa15.8■□□□□ 0.12
HLA-DMB-257ENST00000414017 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
HLA-DMB-257ENST00000414017 ANKRD30AQ9BXX3 1397 aa15.8■□□□□ 0.12
HLA-DMB-257ENST00000414017 A2MP01023 1474 aa15.79■□□□□ 0.12
HLA-DMB-257ENST00000414017 KIF15Q9NS87 1388 aa15.78■□□□□ 0.12
HLA-DMB-257ENST00000414017 ADGBQ8N7X0 1667 aa15.77■□□□□ 0.12
HLA-DMB-257ENST00000414017 SIGLEC1Q9BZZ2 1709 aa15.76■□□□□ 0.11
HLA-DMB-257ENST00000414017 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
HLA-DMB-257ENST00000414017 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
HLA-DMB-257ENST00000414017 KIF3BO15066 747 aa15.75■□□□□ 0.11
HLA-DMB-257ENST00000414017 GGT6Q6P531 493 aa15.75■□□□□ 0.11
HLA-DMB-257ENST00000414017 NCOA1Q15788 1441 aa15.74■□□□□ 0.11
HLA-DMB-257ENST00000414017 ADGRL2O95490 1459 aa15.73■□□□□ 0.11
HLA-DMB-257ENST00000414017 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
HLA-DMB-257ENST00000414017 DUOX2Q9NRD8 1548 aa15.73■□□□□ 0.11
HLA-DMB-257ENST00000414017 REREQ9P2R6 1566 aa15.72■□□□□ 0.11
HLA-DMB-257ENST00000414017 MSH5O43196 834 aa15.71■□□□□ 0.11
HLA-DMB-257ENST00000414017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
HLA-DMB-257ENST00000414017 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
HLA-DMB-257ENST00000414017 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
HLA-DMB-257ENST00000414017 AGLP35573 1532 aa15.69■□□□□ 0.1
HLA-DMB-257ENST00000414017 BCORL1Q5H9F3 1711 aa15.69■□□□□ 0.1
HLA-DMB-257ENST00000414017 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
HLA-DMB-257ENST00000414017 KDM4FA0A1W2PPD8 638 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms