RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 KIF14Q15058 1648 aa40.24■■■■■ 4.03
AC005540.1-201ENST00000413911 MAGI2Q86UL8 1455 aa40.23■■■■■ 4.03
AC005540.1-201ENST00000413911 LRRIQ1Q96JM4 1722 aa40.21■■■■■ 4.03
AC005540.1-201ENST00000413911 CDK11AQ9UQ88 783 aaPredicted RBP40.19■■■■■ 4.02
AC005540.1-201ENST00000413911 MYO5CQ9NQX4 1742 aa40.19■■■■■ 4.02
AC005540.1-201ENST00000413911 LMTK3Q96Q04 1460 aa40.18■■■■■ 4.02
AC005540.1-201ENST00000413911 TROQ12816 1431 aaPredicted RBP40.17■■■■■ 4.02
AC005540.1-201ENST00000413911 EFCAB2Q5VUJ9 269 aa40.17■■■■■ 4.02
AC005540.1-201ENST00000413911 PCF11O94913 1555 aaKnown RBP40.17■■■■■ 4.02
AC005540.1-201ENST00000413911 MLECQ14165 292 aa40.1■■■■■ 4.01
AC005540.1-201ENST00000413911 PLPPR3Q6T4P5 718 aa40.08■■■■■ 4.01
AC005540.1-201ENST00000413911 ATP10AO60312 1499 aa40.06■■■■■ 4
AC005540.1-201ENST00000413911 CLIP1P30622 1438 aa40.04■■■■■ 4
AC005540.1-201ENST00000413911 ARHGAP5Q13017 1502 aa40.04■■■■■ 4
AC005540.1-201ENST00000413911 AFAP1Q8N556 730 aa40.01■■■■■ 4
AC005540.1-201ENST00000413911 C9orf84Q5VXU9 1444 aa39.99■■■■□ 3.99
AC005540.1-201ENST00000413911 CASKIN1Q8WXD9 1431 aa39.99■■■■□ 3.99
AC005540.1-201ENST00000413911 HSPA2P54652 639 aa39.98■■■■□ 3.99
AC005540.1-201ENST00000413911 ZNF518AQ6AHZ1 1483 aa39.98■■■■□ 3.99
AC005540.1-201ENST00000413911 FER1L4A9Z1Z3 1794 aa39.97■■■■□ 3.99
AC005540.1-201ENST00000413911 KDM5CP41229 1560 aa39.96■■■■□ 3.99
AC005540.1-201ENST00000413911 CDC42BPBQ9Y5S2 1711 aa39.96■■■■□ 3.99
AC005540.1-201ENST00000413911 ARHGEF12Q9NZN5 1544 aa39.96■■■■□ 3.99
AC005540.1-201ENST00000413911 CCDC18Q5T9S5 1454 aa39.9■■■■□ 3.98
AC005540.1-201ENST00000413911 FBXO41Q8TF61 875 aa39.88■■■■□ 3.97
AC005540.1-201ENST00000413911 PREX2Q70Z35 1606 aa39.87■■■■□ 3.97
AC005540.1-201ENST00000413911 DIP2CQ9Y2E4 1556 aa39.84■■■■□ 3.97
AC005540.1-201ENST00000413911 TRAPPC8Q9Y2L5 1435 aa39.83■■■■□ 3.97
AC005540.1-201ENST00000413911 CEBPAP49715 358 aaPredicted RBP39.82■■■■□ 3.97
AC005540.1-201ENST00000413911 ABCC1P33527 1531 aa39.81■■■■□ 3.96
AC005540.1-201ENST00000413911 FYCO1Q9BQS8 1478 aa39.8■■■■□ 3.96
AC005540.1-201ENST00000413911 MLH3Q9UHC1 1453 aa39.8■■■■□ 3.96
AC005540.1-201ENST00000413911 MYT1LQ9UL68 1186 aa39.79■■■■□ 3.96
AC005540.1-201ENST00000413911 ABCA6Q8N139 1617 aa39.79■■■■□ 3.96
AC005540.1-201ENST00000413911 CDC42BPAQ5VT25 1732 aa39.76■■■■□ 3.96
AC005540.1-201ENST00000413911 ITSN2Q9NZM3 1697 aa39.75■■■■□ 3.95
AC005540.1-201ENST00000413911 REREQ9P2R6 1566 aa39.75■■■■□ 3.95
AC005540.1-201ENST00000413911 PREX1Q8TCU6 1659 aa39.66■■■■□ 3.94
AC005540.1-201ENST00000413911 KIDINS220Q9ULH0 1771 aa39.66■■■■□ 3.94
AC005540.1-201ENST00000413911 GPATCH8Q9UKJ3 1502 aaKnown RBP39.64■■■■□ 3.94
AC005540.1-201ENST00000413911 AGLP35573 1532 aa39.63■■■■□ 3.93
AC005540.1-201ENST00000413911 SAMD9LQ8IVG5 1584 aa39.62■■■■□ 3.93
AC005540.1-201ENST00000413911 ZNF777Q9ULD5 760 aaPredicted RBP39.61■■■■□ 3.93
AC005540.1-201ENST00000413911 SYCP2Q9BX26 1530 aa39.55■■■■□ 3.92
AC005540.1-201ENST00000413911 C3P01024 1663 aa39.54■■■■□ 3.92
AC005540.1-201ENST00000413911 HNRNPMP52272 730 aaKnown RBP eCLIP39.53■■■■□ 3.92
AC005540.1-201ENST00000413911 UHRF1BP1Q6BDS2 1440 aa39.5■■■■□ 3.91
AC005540.1-201ENST00000413911 STRCQ7RTU9 1775 aa39.49■■■■□ 3.91
AC005540.1-201ENST00000413911 SETD1BQ9UPS6 1966 aaKnown RBP39.48■■■■□ 3.91
AC005540.1-201ENST00000413911 CERKQ8TCT0 537 aa39.47■■■■□ 3.91
AC005540.1-201ENST00000413911 SPAG9O60271 1321 aaKnown RBP39.45■■■■□ 3.91
AC005540.1-201ENST00000413911 CFDP1Q9UEE9 299 aaPredicted RBP39.45■■■■□ 3.91
AC005540.1-201ENST00000413911 KIAA1107Q9UPP5 1409 aa39.43■■■■□ 3.9
AC005540.1-201ENST00000413911 ESF1Q9H501 851 aaKnown RBP39.43■■■■□ 3.9
AC005540.1-201ENST00000413911 CCNB3Q8WWL7 1395 aa39.43■■■■□ 3.9
AC005540.1-201ENST00000413911 MTUS2Q5JR59 1369 aa39.42■■■■□ 3.9
AC005540.1-201ENST00000413911 ATP7AQ04656 1500 aa39.38■■■■□ 3.89
AC005540.1-201ENST00000413911 CNTLNQ9NXG0 1405 aa39.37■■■■□ 3.89
AC005540.1-201ENST00000413911 PLEKHH2Q8IVE3 1493 aa39.37■■■■□ 3.89
AC005540.1-201ENST00000413911 INO80Q9ULG1 1556 aaPredicted RBP39.36■■■■□ 3.89
AC005540.1-201ENST00000413911 SUPT6HQ7KZ85 1726 aaKnown RBP39.34■■■■□ 3.89
AC005540.1-201ENST00000413911 ZNF644Q9H582 1327 aaPredicted RBP39.34■■■■□ 3.89
AC005540.1-201ENST00000413911 TIAM1Q13009 1591 aa39.32■■■■□ 3.88
AC005540.1-201ENST00000413911 PLXNC1O60486 1568 aa39.31■■■■□ 3.88
AC005540.1-201ENST00000413911 DMRT2Q9Y5R5 561 aa39.31■■■■□ 3.88
AC005540.1-201ENST00000413911 CEP162Q5TB80 1403 aa39.29■■■■□ 3.88
AC005540.1-201ENST00000413911 A2MP01023 1474 aa39.28■■■■□ 3.88
AC005540.1-201ENST00000413911 ZMYM3Q14202 1370 aa39.27■■■■□ 3.88
AC005540.1-201ENST00000413911 MROH2AA6NES4 1674 aa39.26■■■■□ 3.88
AC005540.1-201ENST00000413911 EHBP1L1Q8N3D4 1523 aa39.26■■■■□ 3.88
AC005540.1-201ENST00000413911 MBD5Q9P267 1494 aa39.24■■■■□ 3.87
AC005540.1-201ENST00000413911 PTPRTO14522 1441 aa39.22■■■■□ 3.87
AC005540.1-201ENST00000413911 NPATQ14207 1427 aa39.22■■■■□ 3.87
AC005540.1-201ENST00000413911 CLTCQ00610 1675 aaKnown RBP39.19■■■■□ 3.86
AC005540.1-201ENST00000413911 NCOA1Q15788 1441 aa39.18■■■■□ 3.86
AC005540.1-201ENST00000413911 GGT6Q6P531 493 aa39.16■■■■□ 3.86
AC005540.1-201ENST00000413911 ADGBQ8N7X0 1667 aa39.13■■■■□ 3.86
AC005540.1-201ENST00000413911 CAMSAP1Q5T5Y3 1602 aa39.11■■■■□ 3.85
AC005540.1-201ENST00000413911 PTPRKQ15262 1439 aa39.1■■■■□ 3.85
AC005540.1-201ENST00000413911 RTEL1-TNFRSF6BF6WH68 1400 aa39.08■■■■□ 3.85
AC005540.1-201ENST00000413911 NCOA2Q15596 1464 aa39.08■■■■□ 3.85
AC005540.1-201ENST00000413911 LTBP4Q8N2S1 1624 aa39.07■■■■□ 3.84
AC005540.1-201ENST00000413911 MYO3AQ8NEV4 1616 aa39.03■■■■□ 3.84
AC005540.1-201ENST00000413911 DHX29Q7Z478 1369 aaKnown RBP39.02■■■■□ 3.84
AC005540.1-201ENST00000413911 CAMSAP2Q08AD1 1489 aa39.01■■■■□ 3.84
AC005540.1-201ENST00000413911 NCKAP5LQ9HCH0 1330 aa39.01■■■■□ 3.84
AC005540.1-201ENST00000413911 PPP6R1Q9UPN7 881 aa39.01■■■■□ 3.84
AC005540.1-201ENST00000413911 ZNF142P52746 1687 aaPredicted RBP38.99■■■■□ 3.83
AC005540.1-201ENST00000413911 CCDC141Q6ZP82 1450 aa38.98■■■■□ 3.83
AC005540.1-201ENST00000413911 LOC105371045A0A1W2PR82 267 aa38.97■■■■□ 3.83
AC005540.1-201ENST00000413911 CEP170BQ9Y4F5 1589 aaPredicted RBP38.96■■■■□ 3.83
AC005540.1-201ENST00000413911 KIF3BO15066 747 aa38.9■■■■□ 3.82
AC005540.1-201ENST00000413911 PLA2R1Q13018 1463 aa38.9■■■■□ 3.82
AC005540.1-201ENST00000413911 TCOF1Q13428 1488 aaKnown RBP38.88■■■■□ 3.81
AC005540.1-201ENST00000413911 VPS8Q8N3P4 1428 aa38.88■■■■□ 3.81
AC005540.1-201ENST00000413911 RSPH4AQ5TD94 716 aa38.87■■■■□ 3.81
AC005540.1-201ENST00000413911 LRRC9Q6ZRR7 1453 aa38.86■■■■□ 3.81
AC005540.1-201ENST00000413911 ZNF335Q9H4Z2 1342 aaPredicted RBP38.85■■■■□ 3.81
AC005540.1-201ENST00000413911 ARHGEF5Q12774 1597 aa38.84■■■■□ 3.81
AC005540.1-201ENST00000413911 PKD2Q13563 968 aa38.84■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms