RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 ITSN2Q9NZM3 1697 aa39.74■■■■□ 3.95
RHBDD3-203ENST00000413137 MAP3K4Q9Y6R4 1608 aa39.74■■■■□ 3.95
RHBDD3-203ENST00000413137 ZNF777Q9ULD5 760 aaPredicted RBP39.73■■■■□ 3.95
RHBDD3-203ENST00000413137 ARHGAP5Q13017 1502 aa39.72■■■■□ 3.95
RHBDD3-203ENST00000413137 TRHP20396 242 aaPredicted RBP39.68■■■■□ 3.94
RHBDD3-203ENST00000413137 FAM50AQ14320 339 aaKnown RBP39.67■■■■□ 3.94
RHBDD3-203ENST00000413137 PTPN23Q9H3S7 1636 aa39.67■■■■□ 3.94
RHBDD3-203ENST00000413137 ARAP3Q8WWN8 1544 aa39.65■■■■□ 3.94
RHBDD3-203ENST00000413137 EFCAB2Q5VUJ9 269 aa39.64■■■■□ 3.94
RHBDD3-203ENST00000413137 TRIM26Q12899 539 aaPredicted RBP39.63■■■■□ 3.94
RHBDD3-203ENST00000413137 TCOF1Q13428 1488 aaKnown RBP39.63■■■■□ 3.93
RHBDD3-203ENST00000413137 FANCAO15360 1455 aa39.62■■■■□ 3.93
RHBDD3-203ENST00000413137 CAMSAP2Q08AD1 1489 aa39.61■■■■□ 3.93
RHBDD3-203ENST00000413137 SAMD9LQ8IVG5 1584 aa39.6■■■■□ 3.93
RHBDD3-203ENST00000413137 TSPOAP1O95153 1857 aa39.57■■■■□ 3.92
RHBDD3-203ENST00000413137 PPRC1Q5VV67 1664 aaKnown RBP39.55■■■■□ 3.92
RHBDD3-203ENST00000413137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.52■■■■□ 3.92
RHBDD3-203ENST00000413137 HNRNPMP52272 730 aaKnown RBP eCLIP39.51■■■■□ 3.92
RHBDD3-203ENST00000413137 AKNAQ7Z591 1439 aa39.5■■■■□ 3.91
RHBDD3-203ENST00000413137 ARHGEF12Q9NZN5 1544 aa39.49■■■■□ 3.91
RHBDD3-203ENST00000413137 ITGAEP38570 1179 aa39.48■■■■□ 3.91
RHBDD3-203ENST00000413137 NEO1Q92859 1461 aa39.45■■■■□ 3.91
RHBDD3-203ENST00000413137 MBD5Q9P267 1494 aa39.45■■■■□ 3.91
RHBDD3-203ENST00000413137 SYCP2Q9BX26 1530 aa39.45■■■■□ 3.91
RHBDD3-203ENST00000413137 ABCC1P33527 1531 aa39.44■■■■□ 3.91
RHBDD3-203ENST00000413137 KIAA1107Q9UPP5 1409 aa39.43■■■■□ 3.9
RHBDD3-203ENST00000413137 ADGRL1O94910 1474 aa39.43■■■■□ 3.9
RHBDD3-203ENST00000413137 PLEKHH2Q8IVE3 1493 aa39.41■■■■□ 3.9
RHBDD3-203ENST00000413137 TEX14Q8IWB6 1497 aa39.41■■■■□ 3.9
RHBDD3-203ENST00000413137 PCGF6Q9BYE7 350 aa39.41■■■■□ 3.9
RHBDD3-203ENST00000413137 SCAPERQ9BY12 1400 aa39.4■■■■□ 3.9
RHBDD3-203ENST00000413137 CFAP74Q9C0B2 1584 aa39.4■■■■□ 3.9
RHBDD3-203ENST00000413137 PTPRKQ15262 1439 aa39.4■■■■□ 3.9
RHBDD3-203ENST00000413137 ABCC5O15440 1437 aa39.39■■■■□ 3.9
RHBDD3-203ENST00000413137 TRAPPC8Q9Y2L5 1435 aa39.37■■■■□ 3.89
RHBDD3-203ENST00000413137 DAPK1P53355 1430 aa39.36■■■■□ 3.89
RHBDD3-203ENST00000413137 DNMT1P26358 1616 aaKnown RBP39.34■■■■□ 3.89
RHBDD3-203ENST00000413137 AFAP1Q8N556 730 aa39.32■■■■□ 3.88
RHBDD3-203ENST00000413137 ARHGEF5Q12774 1597 aa39.31■■■■□ 3.88
RHBDD3-203ENST00000413137 CHIC2Q9UKJ5 165 aa39.29■■■■□ 3.88
RHBDD3-203ENST00000413137 CCDC141Q6ZP82 1450 aa39.28■■■■□ 3.88
RHBDD3-203ENST00000413137 RAPGEF3O95398 923 aa39.26■■■■□ 3.88
RHBDD3-203ENST00000413137 RSPH4AQ5TD94 716 aa39.26■■■■□ 3.88
RHBDD3-203ENST00000413137 COL17A1Q9UMD9 1497 aaPredicted RBP39.24■■■■□ 3.87
RHBDD3-203ENST00000413137 POGZQ7Z3K3 1410 aa39.23■■■■□ 3.87
RHBDD3-203ENST00000413137 DENND4BO75064 1496 aaPredicted RBP39.23■■■■□ 3.87
RHBDD3-203ENST00000413137 TSPY4P0CV99 314 aa39.2■■■■□ 3.87
RHBDD3-203ENST00000413137 TSPY10P0CW01 314 aa39.2■■■■□ 3.87
RHBDD3-203ENST00000413137 CROCC2H7BZ55 1655 aa39.19■■■■□ 3.86
RHBDD3-203ENST00000413137 C9orf84Q5VXU9 1444 aa39.19■■■■□ 3.86
RHBDD3-203ENST00000413137 ZNF518AQ6AHZ1 1483 aa39.17■■■■□ 3.86
RHBDD3-203ENST00000413137 SHANK2Q9UPX8 1470 aa39.15■■■■□ 3.86
RHBDD3-203ENST00000413137 FRMPD1Q5SYB0 1578 aa39.13■■■■□ 3.85
RHBDD3-203ENST00000413137 SPAG9O60271 1321 aaKnown RBP39.13■■■■□ 3.85
RHBDD3-203ENST00000413137 RICTORQ6R327 1708 aa39.11■■■■□ 3.85
RHBDD3-203ENST00000413137 RRP7BPQ9NSQ0 103 aa39.11■■■■□ 3.85
RHBDD3-203ENST00000413137 KDM5CP41229 1560 aa39.1■■■■□ 3.85
RHBDD3-203ENST00000413137 MAST1Q9Y2H9 1570 aa39.07■■■■□ 3.85
RHBDD3-203ENST00000413137 NCOA1Q15788 1441 aa39.06■■■■□ 3.84
RHBDD3-203ENST00000413137 ADGRL2O95490 1459 aa39.05■■■■□ 3.84
RHBDD3-203ENST00000413137 ROCK1Q13464 1354 aa39.05■■■■□ 3.84
RHBDD3-203ENST00000413137 ZFYVE16Q7Z3T8 1539 aa39.03■■■■□ 3.84
RHBDD3-203ENST00000413137 MYT1LQ9UL68 1186 aa39.02■■■■□ 3.84
RHBDD3-203ENST00000413137 ANKRD30AQ9BXX3 1397 aa39.02■■■■□ 3.84
RHBDD3-203ENST00000413137 RTEL1-TNFRSF6BF6WH68 1400 aa39.02■■■■□ 3.84
RHBDD3-203ENST00000413137 INO80Q9ULG1 1556 aaPredicted RBP39.01■■■■□ 3.84
RHBDD3-203ENST00000413137 ATP7AQ04656 1500 aa39■■■■□ 3.83
RHBDD3-203ENST00000413137 MLH3Q9UHC1 1453 aa39■■■■□ 3.83
RHBDD3-203ENST00000413137 ADGBQ8N7X0 1667 aa38.99■■■■□ 3.83
RHBDD3-203ENST00000413137 NAIPQ13075 1403 aa38.98■■■■□ 3.83
RHBDD3-203ENST00000413137 KIDINS220Q9ULH0 1771 aa38.97■■■■□ 3.83
RHBDD3-203ENST00000413137 HFM1A2PYH4 1435 aa38.97■■■■□ 3.83
RHBDD3-203ENST00000413137 HECW2Q9P2P5 1572 aa38.96■■■■□ 3.83
RHBDD3-203ENST00000413137 KDM6BO15054 1643 aa38.95■■■■□ 3.83
RHBDD3-203ENST00000413137 ZMYM4Q5VZL5 1548 aa38.95■■■■□ 3.83
RHBDD3-203ENST00000413137 KIF15Q9NS87 1388 aa38.94■■■■□ 3.82
RHBDD3-203ENST00000413137 YEATS2Q9ULM3 1422 aa38.92■■■■□ 3.82
RHBDD3-203ENST00000413137 PLXNC1O60486 1568 aa38.91■■■■□ 3.82
RHBDD3-203ENST00000413137 SETD5Q9C0A6 1442 aa38.9■■■■□ 3.82
RHBDD3-203ENST00000413137 ABCA6Q8N139 1617 aa38.85■■■■□ 3.81
RHBDD3-203ENST00000413137 MAGI2Q86UL8 1455 aa38.84■■■■□ 3.81
RHBDD3-203ENST00000413137 RAB3GAP2Q9H2M9 1393 aa38.84■■■■□ 3.81
RHBDD3-203ENST00000413137 GCC2Q8IWJ2 1684 aa38.82■■■■□ 3.81
RHBDD3-203ENST00000413137 DIP2CQ9Y2E4 1556 aa38.81■■■■□ 3.8
RHBDD3-203ENST00000413137 ANKRD50Q9ULJ7 1429 aa38.8■■■■□ 3.8
RHBDD3-203ENST00000413137 DUOX2Q9NRD8 1548 aa38.78■■■■□ 3.8
RHBDD3-203ENST00000413137 DHX29Q7Z478 1369 aaKnown RBP38.76■■■■□ 3.79
RHBDD3-203ENST00000413137 A2MP01023 1474 aa38.75■■■■□ 3.79
RHBDD3-203ENST00000413137 ATP10AO60312 1499 aa38.71■■■■□ 3.79
RHBDD3-203ENST00000413137 ARHGEF40Q8TER5 1519 aa38.7■■■■□ 3.79
RHBDD3-203ENST00000413137 ERBINQ96RT1 1412 aa38.69■■■■□ 3.78
RHBDD3-203ENST00000413137 HRCP23327 699 aa38.63■■■■□ 3.77
RHBDD3-203ENST00000413137 KIF3BO15066 747 aa38.61■■■■□ 3.77
RHBDD3-203ENST00000413137 SIGLEC1Q9BZZ2 1709 aa38.58■■■■□ 3.77
RHBDD3-203ENST00000413137 REREQ9P2R6 1566 aa38.56■■■■□ 3.76
RHBDD3-203ENST00000413137 TRIM52Q96A61 297 aa38.55■■■■□ 3.76
RHBDD3-203ENST00000413137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.53■■■■□ 3.76
RHBDD3-203ENST00000413137 EIF2AK4Q9P2K8 1649 aaKnown RBP38.52■■■■□ 3.76
RHBDD3-203ENST00000413137 NUP155O75694 1391 aa38.47■■■■□ 3.75
RHBDD3-203ENST00000413137 AGLP35573 1532 aa38.47■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms