RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
NUB1-201ENST00000413040 TCOF1Q13428 1488 aaKnown RBP19.17■□□□□ 0.66
NUB1-201ENST00000413040 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
NUB1-201ENST00000413040 NBPF8Q3BBV2 869 aa19.16■□□□□ 0.66
NUB1-201ENST00000413040 WDR62O43379 1518 aa19.15■□□□□ 0.66
NUB1-201ENST00000413040 DENND4BO75064 1496 aaPredicted RBP19.14■□□□□ 0.65
NUB1-201ENST00000413040 CCDC184Q52MB2 194 aa19.14■□□□□ 0.65
NUB1-201ENST00000413040 DAPK1P53355 1430 aa19.13■□□□□ 0.65
NUB1-201ENST00000413040 ERCC6Q03468 1493 aa19.13■□□□□ 0.65
NUB1-201ENST00000413040 PRG4Q92954 1404 aaPredicted RBP19.13■□□□□ 0.65
NUB1-201ENST00000413040 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
NUB1-201ENST00000413040 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
NUB1-201ENST00000413040 ABCC5O15440 1437 aa19.12■□□□□ 0.65
NUB1-201ENST00000413040 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
NUB1-201ENST00000413040 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
NUB1-201ENST00000413040 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
NUB1-201ENST00000413040 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
NUB1-201ENST00000413040 DISP1Q96F81 1524 aa19.08■□□□□ 0.65
NUB1-201ENST00000413040 AKNAQ7Z591 1439 aa19.07■□□□□ 0.64
NUB1-201ENST00000413040 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
NUB1-201ENST00000413040 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
NUB1-201ENST00000413040 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
NUB1-201ENST00000413040 PKD2Q13563 968 aa19.06■□□□□ 0.64
NUB1-201ENST00000413040 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
NUB1-201ENST00000413040 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
NUB1-201ENST00000413040 PLEKHD1A6NEE1 506 aa19.05■□□□□ 0.64
NUB1-201ENST00000413040 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
NUB1-201ENST00000413040 PRKRIP1Q9H875 184 aaPredicted RBP19.04■□□□□ 0.64
NUB1-201ENST00000413040 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
NUB1-201ENST00000413040 KDM2AQ9Y2K7 1162 aa19.03■□□□□ 0.64
NUB1-201ENST00000413040 ROCK1Q13464 1354 aa19.02■□□□□ 0.64
NUB1-201ENST00000413040 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
NUB1-201ENST00000413040 TROQ12816 1431 aaPredicted RBP19.01■□□□□ 0.63
NUB1-201ENST00000413040 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
NUB1-201ENST00000413040 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
NUB1-201ENST00000413040 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
NUB1-201ENST00000413040 TSPY4P0CV99 314 aa18.99■□□□□ 0.63
NUB1-201ENST00000413040 TSPY10P0CW01 314 aa18.99■□□□□ 0.63
NUB1-201ENST00000413040 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
NUB1-201ENST00000413040 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
NUB1-201ENST00000413040 CAMSAP2Q08AD1 1489 aa18.96■□□□□ 0.63
NUB1-201ENST00000413040 RBM19Q9Y4C8 960 aaKnown RBP18.96■□□□□ 0.63
NUB1-201ENST00000413040 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.622e-7■□□□□ 10.4
NUB1-201ENST00000413040 ANKRD30AQ9BXX3 1397 aa18.95■□□□□ 0.62
NUB1-201ENST00000413040 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
NUB1-201ENST00000413040 DNMT1P26358 1616 aaKnown RBP18.95■□□□□ 0.62
NUB1-201ENST00000413040 NUP155O75694 1391 aa18.94■□□□□ 0.62
NUB1-201ENST00000413040 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
NUB1-201ENST00000413040 TEX14Q8IWB6 1497 aa18.91■□□□□ 0.62
NUB1-201ENST00000413040 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
NUB1-201ENST00000413040 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
NUB1-201ENST00000413040 SYNJ2O15056 1496 aa18.89■□□□□ 0.62
NUB1-201ENST00000413040 PZPP20742 1482 aa18.89■□□□□ 0.61
NUB1-201ENST00000413040 USP47Q96K76 1375 aa18.89■□□□□ 0.61
NUB1-201ENST00000413040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
NUB1-201ENST00000413040 KIF14Q15058 1648 aa18.89■□□□□ 0.61
NUB1-201ENST00000413040 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
NUB1-201ENST00000413040 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
NUB1-201ENST00000413040 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
NUB1-201ENST00000413040 KIAA1107Q9UPP5 1409 aa18.87■□□□□ 0.61
NUB1-201ENST00000413040 RGL3Q3MIN7 710 aa18.87■□□□□ 0.61
NUB1-201ENST00000413040 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
NUB1-201ENST00000413040 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
NUB1-201ENST00000413040 SPATA31E1Q6ZUB1 1445 aa18.82■□□□□ 0.6
NUB1-201ENST00000413040 TMC1Q8TDI8 760 aa18.82■□□□□ 0.6
NUB1-201ENST00000413040 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
NUB1-201ENST00000413040 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
NUB1-201ENST00000413040 ZBED9Q6R2W3 1325 aa18.81■□□□□ 0.6
NUB1-201ENST00000413040 ATP10BO94823 1461 aa18.8■□□□□ 0.6
NUB1-201ENST00000413040 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
NUB1-201ENST00000413040 KIF15Q9NS87 1388 aa18.79■□□□□ 0.6
NUB1-201ENST00000413040 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
NUB1-201ENST00000413040 PTPRGP23470 1445 aa18.78■□□□□ 0.6
NUB1-201ENST00000413040 ITSN2Q9NZM3 1697 aa18.78■□□□□ 0.6
NUB1-201ENST00000413040 NUP160Q12769 1436 aa18.76■□□□□ 0.59
NUB1-201ENST00000413040 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
NUB1-201ENST00000413040 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
NUB1-201ENST00000413040 DHX29Q7Z478 1369 aaKnown RBP18.71■□□□□ 0.59
NUB1-201ENST00000413040 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.58
NUB1-201ENST00000413040 ADGBQ8N7X0 1667 aa18.7■□□□□ 0.58
NUB1-201ENST00000413040 NBPF1Q3BBV0 1214 aa18.67■□□□□ 0.58
NUB1-201ENST00000413040 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
NUB1-201ENST00000413040 ERICH6BQ5W0A0 696 aa18.67■□□□□ 0.58
NUB1-201ENST00000413040 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
NUB1-201ENST00000413040 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
NUB1-201ENST00000413040 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
NUB1-201ENST00000413040 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
NUB1-201ENST00000413040 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
NUB1-201ENST00000413040 ABCA8O94911 1581 aa18.65■□□□□ 0.58
NUB1-201ENST00000413040 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
NUB1-201ENST00000413040 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
NUB1-201ENST00000413040 CCDC144AA2RUR9 1427 aa18.63■□□□□ 0.57
NUB1-201ENST00000413040 MSH5O43196 834 aa18.63■□□□□ 0.57
NUB1-201ENST00000413040 MYT1LQ9UL68 1186 aa18.63■□□□□ 0.57
NUB1-201ENST00000413040 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
NUB1-201ENST00000413040 CC2D1BQ5T0F9 858 aaKnown RBP18.62■□□□□ 0.57
NUB1-201ENST00000413040 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
NUB1-201ENST00000413040 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
NUB1-201ENST00000413040 RALGAPBQ86X10 1494 aa18.6■□□□□ 0.57
NUB1-201ENST00000413040 CCDC141Q6ZP82 1450 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms