RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 RIMS1Q86UR5 1692 aaKnown RBP30.65■■■□□ 2.5
ITGA6-204ENST00000412899 EFCAB2Q5VUJ9 269 aa30.65■■■□□ 2.5
ITGA6-204ENST00000412899 PLPPR3Q6T4P5 718 aa30.61■■■□□ 2.49
ITGA6-204ENST00000412899 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
ITGA6-204ENST00000412899 PCF11O94913 1555 aaKnown RBP30.6■■■□□ 2.49
ITGA6-204ENST00000412899 MLECQ14165 292 aa30.6■■■□□ 2.49
ITGA6-204ENST00000412899 KIF14Q15058 1648 aa30.58■■■□□ 2.49
ITGA6-204ENST00000412899 TROQ12816 1431 aaPredicted RBP30.58■■■□□ 2.49
ITGA6-204ENST00000412899 CLIP1P30622 1438 aa30.57■■■□□ 2.48
ITGA6-204ENST00000412899 LMTK3Q96Q04 1460 aa30.57■■■□□ 2.48
ITGA6-204ENST00000412899 SIGLEC1Q9BZZ2 1709 aa30.56■■■□□ 2.48
ITGA6-204ENST00000412899 ARHGAP5Q13017 1502 aa30.52■■■□□ 2.48
ITGA6-204ENST00000412899 ATP10AO60312 1499 aa30.52■■■□□ 2.48
ITGA6-204ENST00000412899 C9orf84Q5VXU9 1444 aa30.48■■■□□ 2.47
ITGA6-204ENST00000412899 LRRIQ1Q96JM4 1722 aa30.48■■■□□ 2.47
ITGA6-204ENST00000412899 ZNF518AQ6AHZ1 1483 aa30.48■■■□□ 2.47
ITGA6-204ENST00000412899 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
ITGA6-204ENST00000412899 HSPA2P54652 639 aa30.46■■■□□ 2.47
ITGA6-204ENST00000412899 AFAP1Q8N556 730 aa30.46■■■□□ 2.47
ITGA6-204ENST00000412899 FBXO41Q8TF61 875 aa30.46■■■□□ 2.47
ITGA6-204ENST00000412899 FER1L4A9Z1Z3 1794 aa30.45■■■□□ 2.46
ITGA6-204ENST00000412899 CASKIN1Q8WXD9 1431 aa30.43■■■□□ 2.46
ITGA6-204ENST00000412899 CCDC18Q5T9S5 1454 aa30.42■■■□□ 2.46
ITGA6-204ENST00000412899 ARHGEF12Q9NZN5 1544 aa30.4■■■□□ 2.46
ITGA6-204ENST00000412899 KDM5CP41229 1560 aa30.39■■■□□ 2.46
ITGA6-204ENST00000412899 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
ITGA6-204ENST00000412899 PREX2Q70Z35 1606 aa30.33■■■□□ 2.45
ITGA6-204ENST00000412899 CEBPAP49715 358 aaPredicted RBP30.32■■■□□ 2.44
ITGA6-204ENST00000412899 DIP2CQ9Y2E4 1556 aa30.3■■■□□ 2.44
ITGA6-204ENST00000412899 FYCO1Q9BQS8 1478 aa30.3■■■□□ 2.44
ITGA6-204ENST00000412899 MLH3Q9UHC1 1453 aa30.3■■■□□ 2.44
ITGA6-204ENST00000412899 TRAPPC8Q9Y2L5 1435 aa30.29■■■□□ 2.44
ITGA6-204ENST00000412899 ABCC1P33527 1531 aa30.28■■■□□ 2.44
ITGA6-204ENST00000412899 REREQ9P2R6 1566 aa30.25■■■□□ 2.43
ITGA6-204ENST00000412899 ABCA6Q8N139 1617 aa30.25■■■□□ 2.43
ITGA6-204ENST00000412899 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
ITGA6-204ENST00000412899 ZNF777Q9ULD5 760 aaPredicted RBP30.23■■■□□ 2.43
ITGA6-204ENST00000412899 PREX1Q8TCU6 1659 aa30.23■■■□□ 2.43
ITGA6-204ENST00000412899 CDC42BPAQ5VT25 1732 aa30.22■■■□□ 2.43
ITGA6-204ENST00000412899 ESF1Q9H501 851 aaKnown RBP30.21■■■□□ 2.43
ITGA6-204ENST00000412899 AGLP35573 1532 aa30.17■■■□□ 2.42
ITGA6-204ENST00000412899 UHRF1BP1Q6BDS2 1440 aa30.16■■■□□ 2.42
ITGA6-204ENST00000412899 KIDINS220Q9ULH0 1771 aa30.15■■■□□ 2.42
ITGA6-204ENST00000412899 GPATCH8Q9UKJ3 1502 aaKnown RBP30.13■■■□□ 2.41
ITGA6-204ENST00000412899 CERKQ8TCT0 537 aa30.13■■■□□ 2.41
ITGA6-204ENST00000412899 SAMD9LQ8IVG5 1584 aa30.11■■■□□ 2.41
ITGA6-204ENST00000412899 HNRNPMP52272 730 aaKnown RBP eCLIP30.11■■■□□ 2.411e-6■■■■□ 22.9
ITGA6-204ENST00000412899 SYCP2Q9BX26 1530 aa30.1■■■□□ 2.41
ITGA6-204ENST00000412899 SPAG9O60271 1321 aaKnown RBP30.09■■■□□ 2.41
ITGA6-204ENST00000412899 CFDP1Q9UEE9 299 aaPredicted RBP30.09■■■□□ 2.41
ITGA6-204ENST00000412899 DMRT2Q9Y5R5 561 aa30.09■■■□□ 2.41
ITGA6-204ENST00000412899 SETD1BQ9UPS6 1966 aaKnown RBP30.08■■■□□ 2.41
ITGA6-204ENST00000412899 C3P01024 1663 aa30.08■■■□□ 2.41
ITGA6-204ENST00000412899 MTUS2Q5JR59 1369 aa30.07■■■□□ 2.4
ITGA6-204ENST00000412899 CCNB3Q8WWL7 1395 aa30.07■■■□□ 2.4
ITGA6-204ENST00000412899 CNTLNQ9NXG0 1405 aa30.05■■■□□ 2.4
ITGA6-204ENST00000412899 PLEKHH2Q8IVE3 1493 aa30.03■■■□□ 2.4
ITGA6-204ENST00000412899 KIAA1107Q9UPP5 1409 aa30.02■■■□□ 2.4
ITGA6-204ENST00000412899 STRCQ7RTU9 1775 aa30.01■■■□□ 2.39
ITGA6-204ENST00000412899 ATP7AQ04656 1500 aa29.98■■■□□ 2.39
ITGA6-204ENST00000412899 SUPT6HQ7KZ85 1726 aaKnown RBP29.96■■■□□ 2.39
ITGA6-204ENST00000412899 INO80Q9ULG1 1556 aaPredicted RBP29.93■■■□□ 2.38
ITGA6-204ENST00000412899 A2MP01023 1474 aa29.93■■■□□ 2.38
ITGA6-204ENST00000412899 ZMYM3Q14202 1370 aa29.92■■■□□ 2.38
ITGA6-204ENST00000412899 MROH2AA6NES4 1674 aa29.91■■■□□ 2.38
ITGA6-204ENST00000412899 EHBP1L1Q8N3D4 1523 aa29.91■■■□□ 2.38
ITGA6-204ENST00000412899 PTPRTO14522 1441 aa29.9■■■□□ 2.38
ITGA6-204ENST00000412899 ZNF644Q9H582 1327 aaPredicted RBP29.9■■■□□ 2.38
ITGA6-204ENST00000412899 NPATQ14207 1427 aa29.89■■■□□ 2.38
ITGA6-204ENST00000412899 TIAM1Q13009 1591 aa29.89■■■□□ 2.38
ITGA6-204ENST00000412899 GGT6Q6P531 493 aa29.88■■■□□ 2.37
ITGA6-204ENST00000412899 CEP162Q5TB80 1403 aa29.88■■■□□ 2.37
ITGA6-204ENST00000412899 PLXNC1O60486 1568 aa29.87■■■□□ 2.37
ITGA6-204ENST00000412899 CLTCQ00610 1675 aaKnown RBP29.83■■■□□ 2.37
ITGA6-204ENST00000412899 NCOA1Q15788 1441 aa29.83■■■□□ 2.37
ITGA6-204ENST00000412899 MBD5Q9P267 1494 aa29.81■■■□□ 2.36
ITGA6-204ENST00000412899 ADGBQ8N7X0 1667 aa29.8■■■□□ 2.36
ITGA6-204ENST00000412899 PPP6R1Q9UPN7 881 aa29.79■■■□□ 2.36
ITGA6-204ENST00000412899 CAMSAP1Q5T5Y3 1602 aa29.78■■■□□ 2.36
ITGA6-204ENST00000412899 RTEL1-TNFRSF6BF6WH68 1400 aa29.78■■■□□ 2.36
ITGA6-204ENST00000412899 PTPRKQ15262 1439 aa29.74■■■□□ 2.35
ITGA6-204ENST00000412899 NCOA2Q15596 1464 aa29.73■■■□□ 2.35
ITGA6-204ENST00000412899 NCKAP5LQ9HCH0 1330 aa29.72■■■□□ 2.35
ITGA6-204ENST00000412899 DHX29Q7Z478 1369 aaKnown RBP29.72■■■□□ 2.35
ITGA6-204ENST00000412899 LTBP4Q8N2S1 1624 aa29.71■■■□□ 2.35
ITGA6-204ENST00000412899 MYO3AQ8NEV4 1616 aa29.71■■■□□ 2.35
ITGA6-204ENST00000412899 RSPH4AQ5TD94 716 aa29.7■■■□□ 2.35
ITGA6-204ENST00000412899 CCDC141Q6ZP82 1450 aa29.69■■■□□ 2.34
ITGA6-204ENST00000412899 CAMSAP2Q08AD1 1489 aa29.68■■■□□ 2.34
ITGA6-204ENST00000412899 CEP170BQ9Y4F5 1589 aaPredicted RBP29.68■■■□□ 2.34
ITGA6-204ENST00000412899 ZNF142P52746 1687 aaPredicted RBP29.67■■■□□ 2.34
ITGA6-204ENST00000412899 KIF3BO15066 747 aa29.67■■■□□ 2.34
ITGA6-204ENST00000412899 PKD2Q13563 968 aa29.66■■■□□ 2.34
ITGA6-204ENST00000412899 PLA2R1Q13018 1463 aa29.65■■■□□ 2.34
ITGA6-204ENST00000412899 IQSEC2Q5JU85 1478 aa29.61■■■□□ 2.33
ITGA6-204ENST00000412899 TSPY4P0CV99 314 aa29.6■■■□□ 2.33
ITGA6-204ENST00000412899 TSPY10P0CW01 314 aa29.6■■■□□ 2.33
ITGA6-204ENST00000412899 ZNF335Q9H4Z2 1342 aaPredicted RBP29.6■■■□□ 2.33
ITGA6-204ENST00000412899 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
ITGA6-204ENST00000412899 TCOF1Q13428 1488 aaKnown RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms