RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 MYO5CQ9NQX4 1742 aa26.61■■□□□ 1.85
PMS2P4-201ENST00000412466 PLCH2O75038 1416 aa26.57■■□□□ 1.84
PMS2P4-201ENST00000412466 KIF14Q15058 1648 aa26.57■■□□□ 1.84
PMS2P4-201ENST00000412466 ATP1B4Q9UN42 357 aaPredicted RBP26.56■■□□□ 1.84
PMS2P4-201ENST00000412466 CDK11AQ9UQ88 783 aaPredicted RBP26.56■■□□□ 1.84
PMS2P4-201ENST00000412466 SCAPERQ9BY12 1400 aa26.54■■□□□ 1.84
PMS2P4-201ENST00000412466 YEATS2Q9ULM3 1422 aa26.54■■□□□ 1.84
PMS2P4-201ENST00000412466 LMTK3Q96Q04 1460 aa26.53■■□□□ 1.84
PMS2P4-201ENST00000412466 FER1L4A9Z1Z3 1794 aa26.51■■□□□ 1.83
PMS2P4-201ENST00000412466 CASKIN1Q8WXD9 1431 aa26.5■■□□□ 1.83
PMS2P4-201ENST00000412466 SIGLEC1Q9BZZ2 1709 aa26.49■■□□□ 1.83
PMS2P4-201ENST00000412466 EFCAB2Q5VUJ9 269 aa26.48■■□□□ 1.83
PMS2P4-201ENST00000412466 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
PMS2P4-201ENST00000412466 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
PMS2P4-201ENST00000412466 ARHGAP5Q13017 1502 aa26.45■■□□□ 1.83
PMS2P4-201ENST00000412466 C9orf84Q5VXU9 1444 aa26.45■■□□□ 1.82
PMS2P4-201ENST00000412466 VPS8Q8N3P4 1428 aa26.45■■□□□ 1.82
PMS2P4-201ENST00000412466 ZNF518AQ6AHZ1 1483 aa26.44■■□□□ 1.82
PMS2P4-201ENST00000412466 ATP10AO60312 1499 aa26.43■■□□□ 1.82
PMS2P4-201ENST00000412466 FBXO41Q8TF61 875 aa26.43■■□□□ 1.82
PMS2P4-201ENST00000412466 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
PMS2P4-201ENST00000412466 LRRIQ1Q96JM4 1722 aa26.41■■□□□ 1.82
PMS2P4-201ENST00000412466 MLECQ14165 292 aa26.4■■□□□ 1.82
PMS2P4-201ENST00000412466 CCDC18Q5T9S5 1454 aa26.39■■□□□ 1.82
PMS2P4-201ENST00000412466 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.81
PMS2P4-201ENST00000412466 KDM5CP41229 1560 aa26.38■■□□□ 1.81
PMS2P4-201ENST00000412466 PREX2Q70Z35 1606 aa26.35■■□□□ 1.81
PMS2P4-201ENST00000412466 PREX1Q8TCU6 1659 aa26.33■■□□□ 1.81
PMS2P4-201ENST00000412466 CDC42BPBQ9Y5S2 1711 aa26.32■■□□□ 1.8
PMS2P4-201ENST00000412466 MYT1LQ9UL68 1186 aa26.31■■□□□ 1.8
PMS2P4-201ENST00000412466 REREQ9P2R6 1566 aa26.3■■□□□ 1.8
PMS2P4-201ENST00000412466 DIP2CQ9Y2E4 1556 aa26.3■■□□□ 1.8
PMS2P4-201ENST00000412466 HSPA2P54652 639 aa26.3■■□□□ 1.8
PMS2P4-201ENST00000412466 ABCC1P33527 1531 aa26.29■■□□□ 1.8
PMS2P4-201ENST00000412466 ITSN2Q9NZM3 1697 aa26.27■■□□□ 1.8
PMS2P4-201ENST00000412466 ABCA6Q8N139 1617 aa26.26■■□□□ 1.79
PMS2P4-201ENST00000412466 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
PMS2P4-201ENST00000412466 APLP2Q06481 763 aa26.24■■□□□ 1.79
PMS2P4-201ENST00000412466 AFAP1Q8N556 730 aa26.24■■□□□ 1.79
PMS2P4-201ENST00000412466 MAP3K1Q13233 1512 aa26.24■■□□□ 1.79
PMS2P4-201ENST00000412466 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
PMS2P4-201ENST00000412466 AGLP35573 1532 aa26.19■■□□□ 1.78
PMS2P4-201ENST00000412466 UHRF1BP1Q6BDS2 1440 aa26.18■■□□□ 1.78
PMS2P4-201ENST00000412466 TIAM1Q13009 1591 aa26.17■■□□□ 1.78
PMS2P4-201ENST00000412466 TRAPPC8Q9Y2L5 1435 aa26.16■■□□□ 1.78
PMS2P4-201ENST00000412466 ESF1Q9H501 851 aaKnown RBP26.15■■□□□ 1.78
PMS2P4-201ENST00000412466 KIDINS220Q9ULH0 1771 aa26.13■■□□□ 1.77
PMS2P4-201ENST00000412466 C3P01024 1663 aa26.13■■□□□ 1.77
PMS2P4-201ENST00000412466 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
PMS2P4-201ENST00000412466 SETD1BQ9UPS6 1966 aaKnown RBP26.12■■□□□ 1.77
PMS2P4-201ENST00000412466 MTUS2Q5JR59 1369 aa26.11■■□□□ 1.77
PMS2P4-201ENST00000412466 SAMD9LQ8IVG5 1584 aa26.1■■□□□ 1.77
PMS2P4-201ENST00000412466 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
PMS2P4-201ENST00000412466 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
PMS2P4-201ENST00000412466 CERKQ8TCT0 537 aa26.08■■□□□ 1.77
PMS2P4-201ENST00000412466 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
PMS2P4-201ENST00000412466 EHBP1L1Q8N3D4 1523 aa26.07■■□□□ 1.76
PMS2P4-201ENST00000412466 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
PMS2P4-201ENST00000412466 PLEKHH2Q8IVE3 1493 aa26.05■■□□□ 1.76
PMS2P4-201ENST00000412466 STRCQ7RTU9 1775 aa26.05■■□□□ 1.76
PMS2P4-201ENST00000412466 ZNF777Q9ULD5 760 aaPredicted RBP26.05■■□□□ 1.76
PMS2P4-201ENST00000412466 GPATCH8Q9UKJ3 1502 aaKnown RBP26.04■■□□□ 1.76
PMS2P4-201ENST00000412466 MROH2AA6NES4 1674 aa26.03■■□□□ 1.76
PMS2P4-201ENST00000412466 SPAG9O60271 1321 aaKnown RBP26.01■■□□□ 1.75
PMS2P4-201ENST00000412466 ATP7AQ04656 1500 aa26.01■■□□□ 1.75
PMS2P4-201ENST00000412466 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
PMS2P4-201ENST00000412466 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
PMS2P4-201ENST00000412466 SUPT6HQ7KZ85 1726 aaKnown RBP25.99■■□□□ 1.75
PMS2P4-201ENST00000412466 INO80Q9ULG1 1556 aaPredicted RBP25.99■■□□□ 1.75
PMS2P4-201ENST00000412466 KIAA1107Q9UPP5 1409 aa25.98■■□□□ 1.75
PMS2P4-201ENST00000412466 CFDP1Q9UEE9 299 aaPredicted RBP25.96■■□□□ 1.75
PMS2P4-201ENST00000412466 PTPRTO14522 1441 aa25.96■■□□□ 1.75
PMS2P4-201ENST00000412466 NPATQ14207 1427 aa25.95■■□□□ 1.74
PMS2P4-201ENST00000412466 PLXNC1O60486 1568 aa25.95■■□□□ 1.74
PMS2P4-201ENST00000412466 HNRNPMP52272 730 aaKnown RBP eCLIP25.93■■□□□ 1.74
PMS2P4-201ENST00000412466 A2MP01023 1474 aa25.91■■□□□ 1.74
PMS2P4-201ENST00000412466 ADGBQ8N7X0 1667 aa25.91■■□□□ 1.74
PMS2P4-201ENST00000412466 CLTCQ00610 1675 aaKnown RBP25.9■■□□□ 1.74
PMS2P4-201ENST00000412466 NCOA2Q15596 1464 aa25.9■■□□□ 1.74
PMS2P4-201ENST00000412466 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
PMS2P4-201ENST00000412466 ZMYM3Q14202 1370 aa25.85■■□□□ 1.73
PMS2P4-201ENST00000412466 ZNF142P52746 1687 aaPredicted RBP25.85■■□□□ 1.73
PMS2P4-201ENST00000412466 CAMSAP1Q5T5Y3 1602 aa25.85■■□□□ 1.73
PMS2P4-201ENST00000412466 MYO3AQ8NEV4 1616 aa25.85■■□□□ 1.73
PMS2P4-201ENST00000412466 IQSEC2Q5JU85 1478 aa25.79■■□□□ 1.72
PMS2P4-201ENST00000412466 CEP170BQ9Y4F5 1589 aaPredicted RBP25.78■■□□□ 1.72
PMS2P4-201ENST00000412466 LTBP4Q8N2S1 1624 aa25.77■■□□□ 1.72
PMS2P4-201ENST00000412466 GGT6Q6P531 493 aa25.77■■□□□ 1.72
PMS2P4-201ENST00000412466 PPP6R1Q9UPN7 881 aa25.77■■□□□ 1.72
PMS2P4-201ENST00000412466 RTEL1-TNFRSF6BF6WH68 1400 aa25.77■■□□□ 1.72
PMS2P4-201ENST00000412466 MYOM3Q5VTT5 1437 aa25.76■■□□□ 1.71
PMS2P4-201ENST00000412466 MBD5Q9P267 1494 aa25.76■■□□□ 1.71
PMS2P4-201ENST00000412466 PLA2R1Q13018 1463 aa25.75■■□□□ 1.71
PMS2P4-201ENST00000412466 PTPRKQ15262 1439 aa25.75■■□□□ 1.71
PMS2P4-201ENST00000412466 MIA2Q96PC5 1412 aa25.74■■□□□ 1.71
PMS2P4-201ENST00000412466 CCDC141Q6ZP82 1450 aa25.73■■□□□ 1.71
PMS2P4-201ENST00000412466 ZNF644Q9H582 1327 aaPredicted RBP25.73■■□□□ 1.71
PMS2P4-201ENST00000412466 FAM135AQ9P2D6 1515 aa25.72■■□□□ 1.71
PMS2P4-201ENST00000412466 PPARGC1BQ86YN6 1023 aaKnown RBP25.71■■□□□ 1.71
PMS2P4-201ENST00000412466 CAMSAP2Q08AD1 1489 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms