RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 MAGI2Q86UL8 1455 aa22.82■■□□□ 1.24
RAB11FIP3-202ENST00000412256 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
RAB11FIP3-202ENST00000412256 HECW1Q76N89 1606 aa22.82■■□□□ 1.24
RAB11FIP3-202ENST00000412256 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
RAB11FIP3-202ENST00000412256 HSPA2P54652 639 aa22.79■■□□□ 1.24
RAB11FIP3-202ENST00000412256 RIMS1Q86UR5 1692 aaKnown RBP22.78■■□□□ 1.24
RAB11FIP3-202ENST00000412256 AFAP1Q8N556 730 aa22.78■■□□□ 1.24
RAB11FIP3-202ENST00000412256 CLIP1P30622 1438 aa22.77■■□□□ 1.24
RAB11FIP3-202ENST00000412256 TROQ12816 1431 aaPredicted RBP22.77■■□□□ 1.24
RAB11FIP3-202ENST00000412256 FBXO41Q8TF61 875 aa22.77■■□□□ 1.24
RAB11FIP3-202ENST00000412256 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
RAB11FIP3-202ENST00000412256 ATP10AO60312 1499 aa22.75■■□□□ 1.23
RAB11FIP3-202ENST00000412256 LMTK3Q96Q04 1460 aa22.75■■□□□ 1.23
RAB11FIP3-202ENST00000412256 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
RAB11FIP3-202ENST00000412256 KIF14Q15058 1648 aa22.72■■□□□ 1.23
RAB11FIP3-202ENST00000412256 MYO5CQ9NQX4 1742 aa22.71■■□□□ 1.23
RAB11FIP3-202ENST00000412256 SIGLEC1Q9BZZ2 1709 aa22.69■■□□□ 1.22
RAB11FIP3-202ENST00000412256 C9orf84Q5VXU9 1444 aa22.69■■□□□ 1.22
RAB11FIP3-202ENST00000412256 CEBPAP49715 358 aaPredicted RBP22.69■■□□□ 1.22
RAB11FIP3-202ENST00000412256 ZNF518AQ6AHZ1 1483 aa22.67■■□□□ 1.22
RAB11FIP3-202ENST00000412256 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
RAB11FIP3-202ENST00000412256 ZNF777Q9ULD5 760 aaPredicted RBP22.62■■□□□ 1.21
RAB11FIP3-202ENST00000412256 CCDC18Q5T9S5 1454 aa22.61■■□□□ 1.21
RAB11FIP3-202ENST00000412256 FER1L4A9Z1Z3 1794 aa22.61■■□□□ 1.21
RAB11FIP3-202ENST00000412256 LRRIQ1Q96JM4 1722 aa22.6■■□□□ 1.21
RAB11FIP3-202ENST00000412256 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
RAB11FIP3-202ENST00000412256 ARHGEF12Q9NZN5 1544 aa22.6■■□□□ 1.21
RAB11FIP3-202ENST00000412256 TRAPPC8Q9Y2L5 1435 aa22.58■■□□□ 1.21
RAB11FIP3-202ENST00000412256 KDM5CP41229 1560 aa22.56■■□□□ 1.2
RAB11FIP3-202ENST00000412256 CDC42BPBQ9Y5S2 1711 aa22.55■■□□□ 1.2
RAB11FIP3-202ENST00000412256 MLH3Q9UHC1 1453 aa22.54■■□□□ 1.2
RAB11FIP3-202ENST00000412256 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.28e-7■■■□□ 17.3
RAB11FIP3-202ENST00000412256 CERKQ8TCT0 537 aa22.52■■□□□ 1.2
RAB11FIP3-202ENST00000412256 FYCO1Q9BQS8 1478 aa22.52■■□□□ 1.2
RAB11FIP3-202ENST00000412256 DIP2CQ9Y2E4 1556 aa22.51■■□□□ 1.19
RAB11FIP3-202ENST00000412256 PREX2Q70Z35 1606 aa22.49■■□□□ 1.19
RAB11FIP3-202ENST00000412256 ABCC1P33527 1531 aa22.49■■□□□ 1.19
RAB11FIP3-202ENST00000412256 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
RAB11FIP3-202ENST00000412256 DMRT2Q9Y5R5 561 aa22.49■■□□□ 1.19
RAB11FIP3-202ENST00000412256 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
RAB11FIP3-202ENST00000412256 UHRF1BP1Q6BDS2 1440 aa22.47■■□□□ 1.19
RAB11FIP3-202ENST00000412256 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
RAB11FIP3-202ENST00000412256 GPATCH8Q9UKJ3 1502 aaKnown RBP22.45■■□□□ 1.18
RAB11FIP3-202ENST00000412256 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
RAB11FIP3-202ENST00000412256 REREQ9P2R6 1566 aa22.44■■□□□ 1.18
RAB11FIP3-202ENST00000412256 PREX1Q8TCU6 1659 aa22.43■■□□□ 1.18
RAB11FIP3-202ENST00000412256 CDC42BPAQ5VT25 1732 aa22.43■■□□□ 1.18
RAB11FIP3-202ENST00000412256 ITSN2Q9NZM3 1697 aa22.42■■□□□ 1.18
RAB11FIP3-202ENST00000412256 AGLP35573 1532 aa22.42■■□□□ 1.18
RAB11FIP3-202ENST00000412256 MTUS2Q5JR59 1369 aa22.42■■□□□ 1.18
RAB11FIP3-202ENST00000412256 SETD1BQ9UPS6 1966 aaKnown RBP22.41■■□□□ 1.18
RAB11FIP3-202ENST00000412256 KIDINS220Q9ULH0 1771 aa22.4■■□□□ 1.18
RAB11FIP3-202ENST00000412256 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
RAB11FIP3-202ENST00000412256 SYCP2Q9BX26 1530 aa22.38■■□□□ 1.17
RAB11FIP3-202ENST00000412256 CNTLNQ9NXG0 1405 aa22.37■■□□□ 1.17
RAB11FIP3-202ENST00000412256 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
RAB11FIP3-202ENST00000412256 ZNF644Q9H582 1327 aaPredicted RBP22.35■■□□□ 1.17
RAB11FIP3-202ENST00000412256 GGT6Q6P531 493 aa22.35■■□□□ 1.17
RAB11FIP3-202ENST00000412256 C3P01024 1663 aa22.35■■□□□ 1.17
RAB11FIP3-202ENST00000412256 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
RAB11FIP3-202ENST00000412256 ZMYM3Q14202 1370 aa22.34■■□□□ 1.17
RAB11FIP3-202ENST00000412256 STRCQ7RTU9 1775 aa22.31■■□□□ 1.16
RAB11FIP3-202ENST00000412256 A2MP01023 1474 aa22.29■■□□□ 1.16
RAB11FIP3-202ENST00000412256 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
RAB11FIP3-202ENST00000412256 PTPRTO14522 1441 aa22.28■■□□□ 1.16
RAB11FIP3-202ENST00000412256 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
RAB11FIP3-202ENST00000412256 NPATQ14207 1427 aa22.25■■□□□ 1.15
RAB11FIP3-202ENST00000412256 CEP162Q5TB80 1403 aa22.25■■□□□ 1.15
RAB11FIP3-202ENST00000412256 NCKAP5LQ9HCH0 1330 aa22.24■■□□□ 1.15
RAB11FIP3-202ENST00000412256 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
RAB11FIP3-202ENST00000412256 NCOA1Q15788 1441 aa22.22■■□□□ 1.15
RAB11FIP3-202ENST00000412256 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
RAB11FIP3-202ENST00000412256 MBD5Q9P267 1494 aa22.2■■□□□ 1.14
RAB11FIP3-202ENST00000412256 EHBP1L1Q8N3D4 1523 aa22.2■■□□□ 1.14
RAB11FIP3-202ENST00000412256 TIAM1Q13009 1591 aa22.2■■□□□ 1.14
RAB11FIP3-202ENST00000412256 KIF3BO15066 747 aa22.18■■□□□ 1.14
RAB11FIP3-202ENST00000412256 MROH2AA6NES4 1674 aa22.17■■□□□ 1.14
RAB11FIP3-202ENST00000412256 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
RAB11FIP3-202ENST00000412256 CAMSAP1Q5T5Y3 1602 aa22.17■■□□□ 1.14
RAB11FIP3-202ENST00000412256 PLXNC1O60486 1568 aa22.17■■□□□ 1.14
RAB11FIP3-202ENST00000412256 DHX29Q7Z478 1369 aaKnown RBP22.17■■□□□ 1.14
RAB11FIP3-202ENST00000412256 LOC105371045A0A1W2PR82 267 aa22.17■■□□□ 1.14
RAB11FIP3-202ENST00000412256 RTEL1-TNFRSF6BF6WH68 1400 aa22.16■■□□□ 1.14
RAB11FIP3-202ENST00000412256 PTPRKQ15262 1439 aa22.16■■□□□ 1.14
RAB11FIP3-202ENST00000412256 RSPH4AQ5TD94 716 aa22.16■■□□□ 1.14
RAB11FIP3-202ENST00000412256 PKD2Q13563 968 aa22.15■■□□□ 1.14
RAB11FIP3-202ENST00000412256 NCOA2Q15596 1464 aa22.14■■□□□ 1.13
RAB11FIP3-202ENST00000412256 TSPY4P0CV99 314 aa22.13■■□□□ 1.13
RAB11FIP3-202ENST00000412256 TSPY10P0CW01 314 aa22.13■■□□□ 1.13
RAB11FIP3-202ENST00000412256 FBXO31Q5XUX0 539 aaPredicted RBP22.12■■□□□ 1.13
RAB11FIP3-202ENST00000412256 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
RAB11FIP3-202ENST00000412256 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
RAB11FIP3-202ENST00000412256 WASHC2CQ9Y4E1 1318 aa22.1■■□□□ 1.13
RAB11FIP3-202ENST00000412256 LTBP4Q8N2S1 1624 aa22.1■■□□□ 1.13
RAB11FIP3-202ENST00000412256 DISP3Q9P2K9 1392 aa22.09■■□□□ 1.13
RAB11FIP3-202ENST00000412256 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
RAB11FIP3-202ENST00000412256 CAMSAP2Q08AD1 1489 aa22.08■■□□□ 1.12
RAB11FIP3-202ENST00000412256 CEP170BQ9Y4F5 1589 aaPredicted RBP22.05■■□□□ 1.12
RAB11FIP3-202ENST00000412256 MYO3AQ8NEV4 1616 aa22.05■■□□□ 1.12
RAB11FIP3-202ENST00000412256 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms