RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 RICTORQ6R327 1708 aa18.66■□□□□ 0.58
LINC00963-201ENST00000412141 CCDC18Q5T9S5 1454 aa18.66■□□□□ 0.58
LINC00963-201ENST00000412141 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
LINC00963-201ENST00000412141 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
LINC00963-201ENST00000412141 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
LINC00963-201ENST00000412141 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
LINC00963-201ENST00000412141 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
LINC00963-201ENST00000412141 MLECQ14165 292 aa18.65■□□□□ 0.58
LINC00963-201ENST00000412141 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
LINC00963-201ENST00000412141 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
LINC00963-201ENST00000412141 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
LINC00963-201ENST00000412141 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
LINC00963-201ENST00000412141 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
LINC00963-201ENST00000412141 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
LINC00963-201ENST00000412141 ZMYM4Q5VZL5 1548 aa18.6■□□□□ 0.57
LINC00963-201ENST00000412141 ZFYVE16Q7Z3T8 1539 aa18.6■□□□□ 0.57
LINC00963-201ENST00000412141 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
LINC00963-201ENST00000412141 SIGLEC1Q9BZZ2 1709 aa18.57■□□□□ 0.56
LINC00963-201ENST00000412141 MAGI2Q86UL8 1455 aa18.56■□□□□ 0.56
LINC00963-201ENST00000412141 RIMS1Q86UR5 1692 aaKnown RBP18.55■□□□□ 0.56
LINC00963-201ENST00000412141 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
LINC00963-201ENST00000412141 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
LINC00963-201ENST00000412141 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
LINC00963-201ENST00000412141 ATP10AO60312 1499 aa18.52■□□□□ 0.56
LINC00963-201ENST00000412141 LMTK3Q96Q04 1460 aa18.52■□□□□ 0.56
LINC00963-201ENST00000412141 TRAPPC8Q9Y2L5 1435 aa18.52■□□□□ 0.56
LINC00963-201ENST00000412141 PREX2Q70Z35 1606 aa18.52■□□□□ 0.55
LINC00963-201ENST00000412141 ARHGEF12Q9NZN5 1544 aa18.51■□□□□ 0.55
LINC00963-201ENST00000412141 HNRNPMP52272 730 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC00963-201ENST00000412141 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
LINC00963-201ENST00000412141 CCNB3Q8WWL7 1395 aa18.5■□□□□ 0.55
LINC00963-201ENST00000412141 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
LINC00963-201ENST00000412141 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
LINC00963-201ENST00000412141 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
LINC00963-201ENST00000412141 ABCC1P33527 1531 aa18.47■□□□□ 0.55
LINC00963-201ENST00000412141 KDM5CP41229 1560 aa18.45■□□□□ 0.54
LINC00963-201ENST00000412141 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
LINC00963-201ENST00000412141 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
LINC00963-201ENST00000412141 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
LINC00963-201ENST00000412141 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
LINC00963-201ENST00000412141 FER1L4A9Z1Z3 1794 aa18.42■□□□□ 0.54
LINC00963-201ENST00000412141 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
LINC00963-201ENST00000412141 MLH3Q9UHC1 1453 aa18.42■□□□□ 0.54
LINC00963-201ENST00000412141 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
LINC00963-201ENST00000412141 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
LINC00963-201ENST00000412141 HSPA2P54652 639 aa18.41■□□□□ 0.54
LINC00963-201ENST00000412141 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
LINC00963-201ENST00000412141 FBXO41Q8TF61 875 aa18.39■□□□□ 0.53
LINC00963-201ENST00000412141 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.53
LINC00963-201ENST00000412141 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
LINC00963-201ENST00000412141 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
LINC00963-201ENST00000412141 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
LINC00963-201ENST00000412141 KIDINS220Q9ULH0 1771 aa18.35■□□□□ 0.53
LINC00963-201ENST00000412141 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
LINC00963-201ENST00000412141 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
LINC00963-201ENST00000412141 NCOA2Q15596 1464 aa18.33■□□□□ 0.53
LINC00963-201ENST00000412141 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
LINC00963-201ENST00000412141 REREQ9P2R6 1566 aa18.32■□□□□ 0.52
LINC00963-201ENST00000412141 ATP7AQ04656 1500 aa18.29■□□□□ 0.52
LINC00963-201ENST00000412141 PREX1Q8TCU6 1659 aa18.29■□□□□ 0.52
LINC00963-201ENST00000412141 GGT6Q6P531 493 aa18.29■□□□□ 0.52
LINC00963-201ENST00000412141 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
LINC00963-201ENST00000412141 AGLP35573 1532 aa18.28■□□□□ 0.52
LINC00963-201ENST00000412141 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
LINC00963-201ENST00000412141 APLP2Q06481 763 aa18.27■□□□□ 0.52
LINC00963-201ENST00000412141 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
LINC00963-201ENST00000412141 A2MP01023 1474 aa18.26■□□□□ 0.51
LINC00963-201ENST00000412141 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
LINC00963-201ENST00000412141 INO80Q9ULG1 1556 aaPredicted RBP18.24■□□□□ 0.51
LINC00963-201ENST00000412141 UHRF1BP1Q6BDS2 1440 aa18.22■□□□□ 0.51
LINC00963-201ENST00000412141 C3P01024 1663 aa18.22■□□□□ 0.51
LINC00963-201ENST00000412141 TSPY4P0CV99 314 aa18.2■□□□□ 0.5
LINC00963-201ENST00000412141 TSPY10P0CW01 314 aa18.2■□□□□ 0.5
LINC00963-201ENST00000412141 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
LINC00963-201ENST00000412141 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
LINC00963-201ENST00000412141 KIF3BO15066 747 aa18.19■□□□□ 0.5
LINC00963-201ENST00000412141 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
LINC00963-201ENST00000412141 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
LINC00963-201ENST00000412141 CERKQ8TCT0 537 aa18.18■□□□□ 0.5
LINC00963-201ENST00000412141 STRCQ7RTU9 1775 aa18.17■□□□□ 0.5
LINC00963-201ENST00000412141 RTEL1-TNFRSF6BF6WH68 1400 aa18.17■□□□□ 0.5
LINC00963-201ENST00000412141 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
LINC00963-201ENST00000412141 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
LINC00963-201ENST00000412141 MAP3K1Q13233 1512 aa18.16■□□□□ 0.5
LINC00963-201ENST00000412141 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
LINC00963-201ENST00000412141 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
LINC00963-201ENST00000412141 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
LINC00963-201ENST00000412141 CLTCQ00610 1675 aaKnown RBP18.13■□□□□ 0.49
LINC00963-201ENST00000412141 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
LINC00963-201ENST00000412141 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
LINC00963-201ENST00000412141 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
LINC00963-201ENST00000412141 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
LINC00963-201ENST00000412141 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
LINC00963-201ENST00000412141 PPP6R1Q9UPN7 881 aa18.09■□□□□ 0.49
LINC00963-201ENST00000412141 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
LINC00963-201ENST00000412141 PTPRTO14522 1441 aa18.07■□□□□ 0.48
LINC00963-201ENST00000412141 NPATQ14207 1427 aa18.07■□□□□ 0.48
LINC00963-201ENST00000412141 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
LINC00963-201ENST00000412141 RRP7BPQ9NSQ0 103 aa18.05■□□□□ 0.48
LINC00963-201ENST00000412141 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms