RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
CRKL-202ENST00000411769 CDC42BPBQ9Y5S2 1711 aa28.45■■■□□ 2.14
CRKL-202ENST00000411769 CAMSAP2Q08AD1 1489 aa28.45■■■□□ 2.14
CRKL-202ENST00000411769 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
CRKL-202ENST00000411769 PREX2Q70Z35 1606 aa28.43■■■□□ 2.14
CRKL-202ENST00000411769 WDR7Q9Y4E6 1490 aa28.42■■■□□ 2.14
CRKL-202ENST00000411769 MYO5CQ9NQX4 1742 aa28.4■■■□□ 2.14
CRKL-202ENST00000411769 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
CRKL-202ENST00000411769 SETD5Q9C0A6 1442 aa28.39■■■□□ 2.13
CRKL-202ENST00000411769 RAB3GAP2Q9H2M9 1393 aa28.39■■■□□ 2.13
CRKL-202ENST00000411769 DAPK1P53355 1430 aa28.36■■■□□ 2.13
CRKL-202ENST00000411769 CHIC2Q9UKJ5 165 aa28.35■■■□□ 2.13
CRKL-202ENST00000411769 ABCC5O15440 1437 aa28.34■■■□□ 2.13
CRKL-202ENST00000411769 DIP2BQ9P265 1576 aa28.33■■■□□ 2.13
CRKL-202ENST00000411769 KIF13AQ9H1H9 1805 aa28.33■■■□□ 2.13
CRKL-202ENST00000411769 SAMD9LQ8IVG5 1584 aa28.32■■■□□ 2.12
CRKL-202ENST00000411769 ARHGAP5Q13017 1502 aa28.32■■■□□ 2.12
CRKL-202ENST00000411769 TRHP20396 242 aaPredicted RBP28.31■■■□□ 2.12
CRKL-202ENST00000411769 FAM69CQ0P6D2 419 aa28.31■■■□□ 2.12
CRKL-202ENST00000411769 HFM1A2PYH4 1435 aa28.3■■■□□ 2.12
CRKL-202ENST00000411769 CROCC2H7BZ55 1655 aa28.29■■■□□ 2.12
CRKL-202ENST00000411769 NAIPQ13075 1403 aa28.27■■■□□ 2.12
CRKL-202ENST00000411769 RRP7BPQ9NSQ0 103 aa28.26■■■□□ 2.12
CRKL-202ENST00000411769 DHX57Q6P158 1386 aaKnown RBP28.25■■■□□ 2.11
CRKL-202ENST00000411769 GCC2Q8IWJ2 1684 aa28.25■■■□□ 2.11
CRKL-202ENST00000411769 ABCA9Q8IUA7 1624 aa28.25■■■□□ 2.11
CRKL-202ENST00000411769 PLCH2O75038 1416 aa28.25■■■□□ 2.11
CRKL-202ENST00000411769 GLI2P10070 1586 aa28.23■■■□□ 2.11
CRKL-202ENST00000411769 HNRNPMP52272 730 aaKnown RBP eCLIP28.21■■■□□ 2.113e-8■□□□□ 11.3
CRKL-202ENST00000411769 AKNAQ7Z591 1439 aa28.21■■■□□ 2.11
CRKL-202ENST00000411769 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.1
CRKL-202ENST00000411769 SYCP2Q9BX26 1530 aa28.2■■■□□ 2.1
CRKL-202ENST00000411769 MBD5Q9P267 1494 aa28.19■■■□□ 2.1
CRKL-202ENST00000411769 ARHGEF5Q12774 1597 aa28.19■■■□□ 2.1
CRKL-202ENST00000411769 DIEXFQ68CQ4 756 aaKnown RBP28.17■■■□□ 2.1
CRKL-202ENST00000411769 ROCK1Q13464 1354 aa28.16■■■□□ 2.1
CRKL-202ENST00000411769 KDM6BO15054 1643 aa28.16■■■□□ 2.1
CRKL-202ENST00000411769 MAP3K4Q9Y6R4 1608 aa28.16■■■□□ 2.1
CRKL-202ENST00000411769 TSPOAP1O95153 1857 aa28.15■■■□□ 2.1
CRKL-202ENST00000411769 ARAP3Q8WWN8 1544 aa28.14■■■□□ 2.1
CRKL-202ENST00000411769 SCAF1Q9H7N4 1312 aaKnown RBP28.14■■■□□ 2.09
CRKL-202ENST00000411769 EFCAB2Q5VUJ9 269 aa28.13■■■□□ 2.09
CRKL-202ENST00000411769 CD109Q6YHK3 1445 aa28.12■■■□□ 2.09
CRKL-202ENST00000411769 CCDC141Q6ZP82 1450 aa28.12■■■□□ 2.09
CRKL-202ENST00000411769 SHANK2Q9UPX8 1470 aa28.12■■■□□ 2.09
CRKL-202ENST00000411769 C9orf84Q5VXU9 1444 aa28.11■■■□□ 2.09
CRKL-202ENST00000411769 ADGRL2O95490 1459 aa28.11■■■□□ 2.09
CRKL-202ENST00000411769 ARHGEF12Q9NZN5 1544 aa28.11■■■□□ 2.09
CRKL-202ENST00000411769 NCOA1Q15788 1441 aa28.1■■■□□ 2.09
CRKL-202ENST00000411769 PLEKHH2Q8IVE3 1493 aa28.1■■■□□ 2.09
CRKL-202ENST00000411769 ABCC1P33527 1531 aa28.1■■■□□ 2.09
CRKL-202ENST00000411769 PPRC1Q5VV67 1664 aaKnown RBP28.09■■■□□ 2.09
CRKL-202ENST00000411769 KIAA1107Q9UPP5 1409 aa28.08■■■□□ 2.09
CRKL-202ENST00000411769 FANCAO15360 1455 aa28.07■■■□□ 2.08
CRKL-202ENST00000411769 TSPY4P0CV99 314 aa28.07■■■□□ 2.08
CRKL-202ENST00000411769 TSPY10P0CW01 314 aa28.07■■■□□ 2.08
CRKL-202ENST00000411769 ANKRD30AQ9BXX3 1397 aa28.05■■■□□ 2.08
CRKL-202ENST00000411769 ZNF316A6NFI3 1004 aaPredicted RBP28.04■■■□□ 2.08
CRKL-202ENST00000411769 RSPH4AQ5TD94 716 aa28.03■■■□□ 2.08
CRKL-202ENST00000411769 CLSPNQ9HAW4 1339 aa28■■■□□ 2.07
CRKL-202ENST00000411769 TRAPPC8Q9Y2L5 1435 aa28■■■□□ 2.07
CRKL-202ENST00000411769 MAST1Q9Y2H9 1570 aa27.99■■■□□ 2.07
CRKL-202ENST00000411769 ADGRL1O94910 1474 aa27.95■■■□□ 2.07
CRKL-202ENST00000411769 TRIM52Q96A61 297 aa27.95■■■□□ 2.06
CRKL-202ENST00000411769 KIF15Q9NS87 1388 aa27.94■■■□□ 2.06
CRKL-202ENST00000411769 ACIN1Q9UKV3 1341 aaKnown RBP27.93■■■□□ 2.06
CRKL-202ENST00000411769 ANKRD50Q9ULJ7 1429 aa27.93■■■□□ 2.06
CRKL-202ENST00000411769 CFAP74Q9C0B2 1584 aa27.92■■■□□ 2.06
CRKL-202ENST00000411769 AFAP1Q8N556 730 aa27.91■■■□□ 2.06
CRKL-202ENST00000411769 TEX14Q8IWB6 1497 aa27.91■■■□□ 2.06
CRKL-202ENST00000411769 SCAPERQ9BY12 1400 aa27.91■■■□□ 2.06
CRKL-202ENST00000411769 PLXNC1O60486 1568 aa27.9■■■□□ 2.06
CRKL-202ENST00000411769 NEUROD1Q13562 356 aa27.87■■■□□ 2.05
CRKL-202ENST00000411769 NEO1Q92859 1461 aa27.86■■■□□ 2.05
CRKL-202ENST00000411769 DENND4BO75064 1496 aaPredicted RBP27.86■■■□□ 2.05
CRKL-202ENST00000411769 COL17A1Q9UMD9 1497 aaPredicted RBP27.85■■■□□ 2.05
CRKL-202ENST00000411769 ZFYVE16Q7Z3T8 1539 aa27.84■■■□□ 2.05
CRKL-202ENST00000411769 SPAG9O60271 1321 aaKnown RBP27.83■■■□□ 2.05
CRKL-202ENST00000411769 INO80Q9ULG1 1556 aaPredicted RBP27.81■■■□□ 2.04
CRKL-202ENST00000411769 SIN3AQ96ST3 1273 aa27.8■■■□□ 2.04
CRKL-202ENST00000411769 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
CRKL-202ENST00000411769 ATP7AQ04656 1500 aa27.79■■■□□ 2.04
CRKL-202ENST00000411769 RTEL1-TNFRSF6BF6WH68 1400 aa27.78■■■□□ 2.04
CRKL-202ENST00000411769 DUOX2Q9NRD8 1548 aa27.77■■■□□ 2.04
CRKL-202ENST00000411769 PZPP20742 1482 aa27.77■■■□□ 2.04
CRKL-202ENST00000411769 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
CRKL-202ENST00000411769 RAPGEF3O95398 923 aa27.75■■■□□ 2.03
CRKL-202ENST00000411769 POGZQ7Z3K3 1410 aa27.75■■■□□ 2.03
CRKL-202ENST00000411769 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
CRKL-202ENST00000411769 SLC4A1APQ9BWU0 796 aaKnown RBP27.74■■■□□ 2.03
CRKL-202ENST00000411769 FOXD1Q16676 465 aa27.73■■■□□ 2.03
CRKL-202ENST00000411769 MYT1LQ9UL68 1186 aa27.72■■■□□ 2.03
CRKL-202ENST00000411769 KDM5CP41229 1560 aa27.72■■■□□ 2.03
CRKL-202ENST00000411769 CENPBP07199 599 aaPredicted RBP27.72■■■□□ 2.03
CRKL-202ENST00000411769 NUP155O75694 1391 aa27.7■■■□□ 2.03
CRKL-202ENST00000411769 ERBINQ96RT1 1412 aa27.7■■■□□ 2.02
CRKL-202ENST00000411769 KDM5DQ9BY66 1539 aa27.69■■■□□ 2.02
CRKL-202ENST00000411769 RICTORQ6R327 1708 aa27.69■■■□□ 2.02
CRKL-202ENST00000411769 UNC13BO14795 1591 aa27.68■■■□□ 2.02
CRKL-202ENST00000411769 FRMPD1Q5SYB0 1578 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms