RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 TIAM1Q13009 1591 aa13.74□□□□□ -0.21
LINC02539-201ENST00000411615 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
LINC02539-201ENST00000411615 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
LINC02539-201ENST00000411615 ASXL2Q76L83 1435 aa13.72□□□□□ -0.21
LINC02539-201ENST00000411615 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
LINC02539-201ENST00000411615 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
LINC02539-201ENST00000411615 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
LINC02539-201ENST00000411615 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
LINC02539-201ENST00000411615 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
LINC02539-201ENST00000411615 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
LINC02539-201ENST00000411615 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
LINC02539-201ENST00000411615 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
LINC02539-201ENST00000411615 GLI2P10070 1586 aa13.65□□□□□ -0.22
LINC02539-201ENST00000411615 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
LINC02539-201ENST00000411615 KIF14Q15058 1648 aa13.63□□□□□ -0.23
LINC02539-201ENST00000411615 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
LINC02539-201ENST00000411615 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
LINC02539-201ENST00000411615 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
LINC02539-201ENST00000411615 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
LINC02539-201ENST00000411615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC02539-201ENST00000411615 KIF13AQ9H1H9 1805 aa13.58□□□□□ -0.24
LINC02539-201ENST00000411615 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
LINC02539-201ENST00000411615 NCOA2Q15596 1464 aa13.58□□□□□ -0.24
LINC02539-201ENST00000411615 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
LINC02539-201ENST00000411615 ARAP3Q8WWN8 1544 aa13.56□□□□□ -0.24
LINC02539-201ENST00000411615 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
LINC02539-201ENST00000411615 PLCH2O75038 1416 aa13.55□□□□□ -0.24
LINC02539-201ENST00000411615 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
LINC02539-201ENST00000411615 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
LINC02539-201ENST00000411615 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
LINC02539-201ENST00000411615 GPATCH8Q9UKJ3 1502 aaKnown RBP13.54□□□□□ -0.24
LINC02539-201ENST00000411615 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
LINC02539-201ENST00000411615 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
LINC02539-201ENST00000411615 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
LINC02539-201ENST00000411615 MIA2Q96PC5 1412 aa13.52□□□□□ -0.25
LINC02539-201ENST00000411615 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
LINC02539-201ENST00000411615 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
LINC02539-201ENST00000411615 PHLDB1Q86UU1 1377 aa13.51□□□□□ -0.25
LINC02539-201ENST00000411615 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
LINC02539-201ENST00000411615 TEX14Q8IWB6 1497 aa13.49□□□□□ -0.25
LINC02539-201ENST00000411615 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
LINC02539-201ENST00000411615 NEO1Q92859 1461 aa13.48□□□□□ -0.25
LINC02539-201ENST00000411615 PPRC1Q5VV67 1664 aaKnown RBP13.48□□□□□ -0.25
LINC02539-201ENST00000411615 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
LINC02539-201ENST00000411615 CFDP1Q9UEE9 299 aaPredicted RBP13.48□□□□□ -0.25
LINC02539-201ENST00000411615 CFAP74Q9C0B2 1584 aa13.48□□□□□ -0.25
LINC02539-201ENST00000411615 ARHGAP5Q13017 1502 aa13.47□□□□□ -0.25
LINC02539-201ENST00000411615 FANCAO15360 1455 aa13.47□□□□□ -0.25
LINC02539-201ENST00000411615 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.26
LINC02539-201ENST00000411615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC02539-201ENST00000411615 TSPOAP1O95153 1857 aa13.45□□□□□ -0.26
LINC02539-201ENST00000411615 PLEKHH2Q8IVE3 1493 aa13.45□□□□□ -0.26
LINC02539-201ENST00000411615 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
LINC02539-201ENST00000411615 TCOF1Q13428 1488 aaKnown RBP13.44□□□□□ -0.26
LINC02539-201ENST00000411615 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
LINC02539-201ENST00000411615 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
LINC02539-201ENST00000411615 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
LINC02539-201ENST00000411615 POTEHQ6S545 545 aa13.43□□□□□ -0.26
LINC02539-201ENST00000411615 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
LINC02539-201ENST00000411615 PTPN23Q9H3S7 1636 aa13.42□□□□□ -0.26
LINC02539-201ENST00000411615 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
LINC02539-201ENST00000411615 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
LINC02539-201ENST00000411615 CAMSAP2Q08AD1 1489 aa13.4□□□□□ -0.26
LINC02539-201ENST00000411615 ABCC1P33527 1531 aa13.39□□□□□ -0.27
LINC02539-201ENST00000411615 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
LINC02539-201ENST00000411615 ADGRL1O94910 1474 aa13.39□□□□□ -0.27
LINC02539-201ENST00000411615 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
LINC02539-201ENST00000411615 ARHGEF5Q12774 1597 aa13.38□□□□□ -0.27
LINC02539-201ENST00000411615 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
LINC02539-201ENST00000411615 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
LINC02539-201ENST00000411615 DENND4BO75064 1496 aaPredicted RBP13.37□□□□□ -0.27
LINC02539-201ENST00000411615 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
LINC02539-201ENST00000411615 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
LINC02539-201ENST00000411615 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
LINC02539-201ENST00000411615 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC02539-201ENST00000411615 ZNF518AQ6AHZ1 1483 aa13.35□□□□□ -0.27
LINC02539-201ENST00000411615 POGZQ7Z3K3 1410 aa13.34□□□□□ -0.27
LINC02539-201ENST00000411615 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
LINC02539-201ENST00000411615 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
LINC02539-201ENST00000411615 RICTORQ6R327 1708 aa13.33□□□□□ -0.27
LINC02539-201ENST00000411615 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
LINC02539-201ENST00000411615 KDM5CP41229 1560 aa13.32□□□□□ -0.28
LINC02539-201ENST00000411615 TRAPPC8Q9Y2L5 1435 aa13.32□□□□□ -0.28
LINC02539-201ENST00000411615 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
LINC02539-201ENST00000411615 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
LINC02539-201ENST00000411615 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
LINC02539-201ENST00000411615 RTEL1-TNFRSF6BF6WH68 1400 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 ABCC5O15440 1437 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 DAPK1P53355 1430 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 MAST1Q9Y2H9 1570 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 KDM6BO15054 1643 aa13.31□□□□□ -0.28
LINC02539-201ENST00000411615 MAGI2Q86UL8 1455 aa13.3□□□□□ -0.28
LINC02539-201ENST00000411615 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
LINC02539-201ENST00000411615 ZMYM4Q5VZL5 1548 aa13.3□□□□□ -0.28
LINC02539-201ENST00000411615 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
LINC02539-201ENST00000411615 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
LINC02539-201ENST00000411615 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
LINC02539-201ENST00000411615 RAPGEF3O95398 923 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms