RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 CD109Q6YHK3 1445 aa14.76□□□□□ -0.05
RN7SKP3-201ENST00000411409 TSPOAP1O95153 1857 aa14.76□□□□□ -0.05
RN7SKP3-201ENST00000411409 MAP3K4Q9Y6R4 1608 aa14.75□□□□□ -0.05
RN7SKP3-201ENST00000411409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.73□□□□□ -0.05
RN7SKP3-201ENST00000411409 PLCH2O75038 1416 aa14.72□□□□□ -0.05
RN7SKP3-201ENST00000411409 SUPT6HQ7KZ85 1726 aaKnown RBP14.71□□□□□ -0.05
RN7SKP3-201ENST00000411409 NEO1Q92859 1461 aa14.7□□□□□ -0.06
RN7SKP3-201ENST00000411409 KDM4FA0A1W2PPD8 638 aa14.69□□□□□ -0.06
RN7SKP3-201ENST00000411409 CFAP74Q9C0B2 1584 aa14.68□□□□□ -0.06
RN7SKP3-201ENST00000411409 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
RN7SKP3-201ENST00000411409 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
RN7SKP3-201ENST00000411409 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
RN7SKP3-201ENST00000411409 KANK4Q5T7N3 995 aaPredicted RBP14.67□□□□□ -0.06
RN7SKP3-201ENST00000411409 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
RN7SKP3-201ENST00000411409 TTC37Q6PGP7 1564 aa14.66□□□□□ -0.06
RN7SKP3-201ENST00000411409 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
RN7SKP3-201ENST00000411409 GPATCH8Q9UKJ3 1502 aaKnown RBP14.66□□□□□ -0.06
RN7SKP3-201ENST00000411409 MIA2Q96PC5 1412 aa14.66□□□□□ -0.06
RN7SKP3-201ENST00000411409 PLEKHH2Q8IVE3 1493 aa14.64□□□□□ -0.07
RN7SKP3-201ENST00000411409 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
RN7SKP3-201ENST00000411409 FANCAO15360 1455 aa14.63□□□□□ -0.07
RN7SKP3-201ENST00000411409 PREX2Q70Z35 1606 aa14.63□□□□□ -0.07
RN7SKP3-201ENST00000411409 PPRC1Q5VV67 1664 aaKnown RBP14.63□□□□□ -0.07
RN7SKP3-201ENST00000411409 RSPH4AQ5TD94 716 aa14.63□□□□□ -0.07
RN7SKP3-201ENST00000411409 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
RN7SKP3-201ENST00000411409 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
RN7SKP3-201ENST00000411409 MYOM3Q5VTT5 1437 aa14.61□□□□□ -0.07
RN7SKP3-201ENST00000411409 AKNAQ7Z591 1439 aa14.61□□□□□ -0.07
RN7SKP3-201ENST00000411409 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
RN7SKP3-201ENST00000411409 CDC42BPAQ5VT25 1732 aa14.6□□□□□ -0.07
RN7SKP3-201ENST00000411409 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.07
RN7SKP3-201ENST00000411409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.56□□□□□ -0.08
RN7SKP3-201ENST00000411409 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
RN7SKP3-201ENST00000411409 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
RN7SKP3-201ENST00000411409 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
RN7SKP3-201ENST00000411409 ABCC1P33527 1531 aa14.53□□□□□ -0.08
RN7SKP3-201ENST00000411409 ZNF518AQ6AHZ1 1483 aa14.53□□□□□ -0.08
RN7SKP3-201ENST00000411409 MAGI2Q86UL8 1455 aa14.53□□□□□ -0.08
RN7SKP3-201ENST00000411409 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
RN7SKP3-201ENST00000411409 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
RN7SKP3-201ENST00000411409 TCOF1Q13428 1488 aaKnown RBP14.52□□□□□ -0.08
RN7SKP3-201ENST00000411409 POGZQ7Z3K3 1410 aa14.51□□□□□ -0.09
RN7SKP3-201ENST00000411409 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
RN7SKP3-201ENST00000411409 ARHGEF5Q12774 1597 aa14.49□□□□□ -0.09
RN7SKP3-201ENST00000411409 ZNF777Q9ULD5 760 aaPredicted RBP14.49□□□□□ -0.09
RN7SKP3-201ENST00000411409 CAMSAP2Q08AD1 1489 aa14.49□□□□□ -0.09
RN7SKP3-201ENST00000411409 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
RN7SKP3-201ENST00000411409 ZMYM4Q5VZL5 1548 aa14.48□□□□□ -0.09
RN7SKP3-201ENST00000411409 MLH3Q9UHC1 1453 aa14.48□□□□□ -0.09
RN7SKP3-201ENST00000411409 RTEL1-TNFRSF6BF6WH68 1400 aa14.48□□□□□ -0.09
RN7SKP3-201ENST00000411409 RRBP1Q9P2E9 1410 aaKnown RBP14.48□□□□□ -0.09
RN7SKP3-201ENST00000411409 PTPN23Q9H3S7 1636 aa14.48□□□□□ -0.09
RN7SKP3-201ENST00000411409 KDM5CP41229 1560 aa14.47□□□□□ -0.09
RN7SKP3-201ENST00000411409 TSPY4P0CV99 314 aa14.47□□□□□ -0.09
RN7SKP3-201ENST00000411409 TSPY10P0CW01 314 aa14.47□□□□□ -0.09
RN7SKP3-201ENST00000411409 CCDC141Q6ZP82 1450 aa14.46□□□□□ -0.09
RN7SKP3-201ENST00000411409 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
RN7SKP3-201ENST00000411409 RICTORQ6R327 1708 aa14.46□□□□□ -0.1
RN7SKP3-201ENST00000411409 ARHGEF12Q9NZN5 1544 aa14.46□□□□□ -0.1
RN7SKP3-201ENST00000411409 SYCP2Q9BX26 1530 aa14.45□□□□□ -0.1
RN7SKP3-201ENST00000411409 RAPGEF3O95398 923 aa14.44□□□□□ -0.1
RN7SKP3-201ENST00000411409 HNRNPMP52272 730 aaKnown RBP eCLIP14.44□□□□□ -0.1
RN7SKP3-201ENST00000411409 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
RN7SKP3-201ENST00000411409 ZNF644Q9H582 1327 aaPredicted RBP14.43□□□□□ -0.1
RN7SKP3-201ENST00000411409 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
RN7SKP3-201ENST00000411409 SPAG9O60271 1321 aaKnown RBP14.42□□□□□ -0.1
RN7SKP3-201ENST00000411409 TRAPPC8Q9Y2L5 1435 aa14.42□□□□□ -0.1
RN7SKP3-201ENST00000411409 AFAP1Q8N556 730 aa14.42□□□□□ -0.1
RN7SKP3-201ENST00000411409 FRMPD1Q5SYB0 1578 aa14.42□□□□□ -0.1
RN7SKP3-201ENST00000411409 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
RN7SKP3-201ENST00000411409 MAST1Q9Y2H9 1570 aa14.41□□□□□ -0.1
RN7SKP3-201ENST00000411409 HECW2Q9P2P5 1572 aa14.4□□□□□ -0.1
RN7SKP3-201ENST00000411409 DNMT1P26358 1616 aaKnown RBP14.4□□□□□ -0.1
RN7SKP3-201ENST00000411409 ZFYVE16Q7Z3T8 1539 aa14.39□□□□□ -0.11
RN7SKP3-201ENST00000411409 ABCC5O15440 1437 aa14.39□□□□□ -0.11
RN7SKP3-201ENST00000411409 DAPK1P53355 1430 aa14.39□□□□□ -0.11
RN7SKP3-201ENST00000411409 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
RN7SKP3-201ENST00000411409 PPARGC1BQ86YN6 1023 aaKnown RBP14.38□□□□□ -0.11
RN7SKP3-201ENST00000411409 REREQ9P2R6 1566 aa14.38□□□□□ -0.11
RN7SKP3-201ENST00000411409 ATP10AO60312 1499 aa14.38□□□□□ -0.11
RN7SKP3-201ENST00000411409 INO80Q9ULG1 1556 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP3-201ENST00000411409 ATP7AQ04656 1500 aa14.36□□□□□ -0.11
RN7SKP3-201ENST00000411409 ARHGEF40Q8TER5 1519 aa14.36□□□□□ -0.11
RN7SKP3-201ENST00000411409 ROCK1Q13464 1354 aa14.36□□□□□ -0.11
RN7SKP3-201ENST00000411409 C9orf84Q5VXU9 1444 aa14.36□□□□□ -0.11
RN7SKP3-201ENST00000411409 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
RN7SKP3-201ENST00000411409 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
RN7SKP3-201ENST00000411409 ADGRL2O95490 1459 aa14.35□□□□□ -0.11
RN7SKP3-201ENST00000411409 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
RN7SKP3-201ENST00000411409 KIDINS220Q9ULH0 1771 aa14.34□□□□□ -0.11
RN7SKP3-201ENST00000411409 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
RN7SKP3-201ENST00000411409 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.11
RN7SKP3-201ENST00000411409 AGLP35573 1532 aa14.32□□□□□ -0.12
RN7SKP3-201ENST00000411409 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP3-201ENST00000411409 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
RN7SKP3-201ENST00000411409 DHX29Q7Z478 1369 aaKnown RBP14.32□□□□□ -0.12
RN7SKP3-201ENST00000411409 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
RN7SKP3-201ENST00000411409 DIP2CQ9Y2E4 1556 aa14.31□□□□□ -0.12
RN7SKP3-201ENST00000411409 ARID4BQ4LE39 1312 aaPredicted RBP14.31□□□□□ -0.12
RN7SKP3-201ENST00000411409 A2MP01023 1474 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms