RNA–Protein interactions for RNA: ENST00000410804.1

RNU4-6P-201, Transcript of RNA, U4 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU4-6P, Length 122 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-6P-201ENST00000410804 DOK7Q18PE1 504 aa8.56□□□□□ -1.04
RNU4-6P-201ENST00000410804 PKD2Q13563 968 aa8.55□□□□□ -1.04
RNU4-6P-201ENST00000410804 HOXB1P14653 301 aaPredicted RBP8.54□□□□□ -1.04
RNU4-6P-201ENST00000410804 SPNS2Q8IVW8 549 aa8.54□□□□□ -1.04
RNU4-6P-201ENST00000410804 RGL2O15211 777 aa8.53□□□□□ -1.04
RNU4-6P-201ENST00000410804 FBXO22Q8NEZ5 403 aa8.53□□□□□ -1.04
RNU4-6P-201ENST00000410804 RIMBP2O15034 1052 aa8.52□□□□□ -1.05
RNU4-6P-201ENST00000410804 MFRPQ9BY79 579 aa8.52□□□□□ -1.05
RNU4-6P-201ENST00000410804 MMRN1Q13201 1228 aa8.51□□□□□ -1.05
RNU4-6P-201ENST00000410804 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
RNU4-6P-201ENST00000410804 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
RNU4-6P-201ENST00000410804 ERBB3P21860 1342 aa8.5□□□□□ -1.05
RNU4-6P-201ENST00000410804 ZSWIM6Q9HCJ5 1215 aa8.46□□□□□ -1.06
RNU4-6P-201ENST00000410804 GPR153Q6NV75 609 aa8.45□□□□□ -1.06
RNU4-6P-201ENST00000410804 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
RNU4-6P-201ENST00000410804 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
RNU4-6P-201ENST00000410804 C2orf72A6NCS6 295 aa8.41□□□□□ -1.06
RNU4-6P-201ENST00000410804 KIF3CO14782 793 aa8.39□□□□□ -1.07
RNU4-6P-201ENST00000410804 KHSRPQ92945 711 aaKnown RBP eCLIP8.39□□□□□ -1.07
RNU4-6P-201ENST00000410804 PPP1R37O75864 691 aa8.38□□□□□ -1.07
RNU4-6P-201ENST00000410804 ZNF687Q8N1G0 1237 aa8.38□□□□□ -1.07
RNU4-6P-201ENST00000410804 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
RNU4-6P-201ENST00000410804 DCAF8L2P0C7V8 631 aa8.35□□□□□ -1.07
RNU4-6P-201ENST00000410804 ZNF316A6NFI3 1004 aaPredicted RBP8.34□□□□□ -1.07
RNU4-6P-201ENST00000410804 HS6ST3Q8IZP7 471 aa8.33□□□□□ -1.08
RNU4-6P-201ENST00000410804 NUDT7P0C024 238 aa8.32□□□□□ -1.08
RNU4-6P-201ENST00000410804 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
RNU4-6P-201ENST00000410804 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
RNU4-6P-201ENST00000410804 SLC34A2O95436 690 aa8.29□□□□□ -1.08
RNU4-6P-201ENST00000410804 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
RNU4-6P-201ENST00000410804 RNF166Q96A37 237 aaPredicted RBP8.27□□□□□ -1.09
RNU4-6P-201ENST00000410804 LHX6Q9UPM6 363 aa8.27□□□□□ -1.09
RNU4-6P-201ENST00000410804 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
RNU4-6P-201ENST00000410804 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
RNU4-6P-201ENST00000410804 GPHNQ9NQX3 736 aaPredicted RBP8.24□□□□□ -1.09
RNU4-6P-201ENST00000410804 RB1CC1Q8TDY2 1594 aa8.23□□□□□ -1.09
RNU4-6P-201ENST00000410804 FOXK1P85037 733 aa8.23□□□□□ -1.09
RNU4-6P-201ENST00000410804 PLPP6Q8IY26 295 aa8.23□□□□□ -1.09
RNU4-6P-201ENST00000410804 LSM11P83369 360 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU4-6P-201ENST00000410804 AXIN2Q9Y2T1 843 aa8.22□□□□□ -1.09
RNU4-6P-201ENST00000410804 DSG2Q14126 1118 aa8.21□□□□□ -1.1
RNU4-6P-201ENST00000410804 POTEEQ6S8J3 1075 aa8.21□□□□□ -1.1
RNU4-6P-201ENST00000410804 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
RNU4-6P-201ENST00000410804 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.1
RNU4-6P-201ENST00000410804 PBX2P40425 430 aa8.2□□□□□ -1.1
RNU4-6P-201ENST00000410804 PTGER2P43116 358 aa8.2□□□□□ -1.1
RNU4-6P-201ENST00000410804 KDM4FA0A1W2PPD8 638 aa8.18□□□□□ -1.1
RNU4-6P-201ENST00000410804 RYDENQ9NUL5 291 aaKnown RBP8.18□□□□□ -1.1
RNU4-6P-201ENST00000410804 NACADO15069 1562 aa8.18□□□□□ -1.1
RNU4-6P-201ENST00000410804 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
RNU4-6P-201ENST00000410804 TBC1D12O60347 775 aa8.16□□□□□ -1.1
RNU4-6P-201ENST00000410804 ZCCHC6Q5VYS8 1495 aaKnown RBP8.15□□□□□ -1.1
RNU4-6P-201ENST00000410804 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
RNU4-6P-201ENST00000410804 CRISPLD2Q9H0B8 497 aa8.13□□□□□ -1.11
RNU4-6P-201ENST00000410804 UPF1Q92900 1129 aaKnown RBP eCLIP8.12□□□□□ -1.11
RNU4-6P-201ENST00000410804 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
RNU4-6P-201ENST00000410804 PSEN2P49810 448 aa8.11□□□□□ -1.11
RNU4-6P-201ENST00000410804 PPP4R3BQ5MIZ7 849 aa8.11□□□□□ -1.11
RNU4-6P-201ENST00000410804 PPP1R15BQ5SWA1 713 aa8.11□□□□□ -1.11
RNU4-6P-201ENST00000410804 ADGRD1Q6QNK2 874 aa8.11□□□□□ -1.11
RNU4-6P-201ENST00000410804 NCKAP5LQ9HCH0 1330 aa8.1□□□□□ -1.11
RNU4-6P-201ENST00000410804 PDE4AP27815 886 aa8.1□□□□□ -1.11
RNU4-6P-201ENST00000410804 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
RNU4-6P-201ENST00000410804 OXER1Q8TDS5 423 aa8.1□□□□□ -1.11
RNU4-6P-201ENST00000410804 SCRIBQ14160 1630 aa8.07□□□□□ -1.12
RNU4-6P-201ENST00000410804 TK2O00142 265 aa8.06□□□□□ -1.12
RNU4-6P-201ENST00000410804 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
RNU4-6P-201ENST00000410804 ZNF454Q8N9F8 522 aa8.05□□□□□ -1.12
RNU4-6P-201ENST00000410804 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
RNU4-6P-201ENST00000410804 UNC13AQ9UPW8 1703 aa8.05□□□□□ -1.12
RNU4-6P-201ENST00000410804 HRO43593 1189 aa8.04□□□□□ -1.12
RNU4-6P-201ENST00000410804 KCNH8Q96L42 1107 aa8.04□□□□□ -1.12
RNU4-6P-201ENST00000410804 MYO15BQ96JP2 1530 aa8.03□□□□□ -1.12
RNU4-6P-201ENST00000410804 DDX27Q96GQ7 796 aaKnown RBP8.03□□□□□ -1.12
RNU4-6P-201ENST00000410804 HCSTQ9UBK5 93 aa8.02□□□□□ -1.13
RNU4-6P-201ENST00000410804 EVI5O60447 810 aa8.01□□□□□ -1.13
RNU4-6P-201ENST00000410804 STAC3Q96MF2 364 aa8.01□□□□□ -1.13
RNU4-6P-201ENST00000410804 DCAF1Q9Y4B6 1507 aa8.01□□□□□ -1.13
RNU4-6P-201ENST00000410804 FOSBP53539 338 aa8□□□□□ -1.13
RNU4-6P-201ENST00000410804 BCL2L12Q9HB09 334 aa8□□□□□ -1.13
RNU4-6P-201ENST00000410804 ANO8Q9HCE9 1232 aaPredicted RBP8□□□□□ -1.13
RNU4-6P-201ENST00000410804 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
RNU4-6P-201ENST00000410804 MFSD10Q14728 455 aa7.99□□□□□ -1.13
RNU4-6P-201ENST00000410804 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
RNU4-6P-201ENST00000410804 BICRAQ9NZM4 1560 aa7.99□□□□□ -1.13
RNU4-6P-201ENST00000410804 VPS9D1Q9Y2B5 631 aa7.99□□□□□ -1.13
RNU4-6P-201ENST00000410804 CADPS2Q86UW7 1296 aa7.98□□□□□ -1.13
RNU4-6P-201ENST00000410804 PTPREP23469 700 aa7.97□□□□□ -1.13
RNU4-6P-201ENST00000410804 JPH4Q96JJ6 628 aa7.97□□□□□ -1.13
RNU4-6P-201ENST00000410804 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
RNU4-6P-201ENST00000410804 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
RNU4-6P-201ENST00000410804 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
RNU4-6P-201ENST00000410804 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
RNU4-6P-201ENST00000410804 SLC4A5Q9BY07 1137 aa7.94□□□□□ -1.14
RNU4-6P-201ENST00000410804 ZBED2Q9BTP6 218 aa7.93□□□□□ -1.14
RNU4-6P-201ENST00000410804 BHMG1C9JSJ3 638 aaPredicted RBP7.92□□□□□ -1.14
RNU4-6P-201ENST00000410804 PTPN5P54829 565 aa7.91□□□□□ -1.14
RNU4-6P-201ENST00000410804 PCDHGA10Q9Y5H3 936 aa7.91□□□□□ -1.14
RNU4-6P-201ENST00000410804 SHROOM4Q9ULL8 1493 aa7.9□□□□□ -1.14
RNU4-6P-201ENST00000410804 GOLGA8CPA6NN73 597 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms