RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PREX2Q70Z35 1606 aa37.53■■■■□ 3.6
UBE2E3-202ENST00000410062 APLP2Q06481 763 aa37.51■■■■□ 3.6
UBE2E3-202ENST00000410062 KANK4Q5T7N3 995 aaPredicted RBP37.51■■■■□ 3.59
UBE2E3-202ENST00000410062 GPATCH8Q9UKJ3 1502 aaKnown RBP37.48■■■■□ 3.59
UBE2E3-202ENST00000410062 RAPGEF3O95398 923 aa37.47■■■■□ 3.59
UBE2E3-202ENST00000410062 CCNB3Q8WWL7 1395 aa37.46■■■■□ 3.59
UBE2E3-202ENST00000410062 SUPT6HQ7KZ85 1726 aaKnown RBP37.46■■■■□ 3.59
UBE2E3-202ENST00000410062 ADGRL1O94910 1474 aa37.45■■■■□ 3.59
UBE2E3-202ENST00000410062 NCOA2Q15596 1464 aa37.43■■■■□ 3.58
UBE2E3-202ENST00000410062 DENND4BO75064 1496 aaPredicted RBP37.42■■■■□ 3.58
UBE2E3-202ENST00000410062 SCAPERQ9BY12 1400 aa37.4■■■■□ 3.58
UBE2E3-202ENST00000410062 FRMPD1Q5SYB0 1578 aa37.4■■■■□ 3.58
UBE2E3-202ENST00000410062 RICTORQ6R327 1708 aa37.37■■■■□ 3.57
UBE2E3-202ENST00000410062 CFDP1Q9UEE9 299 aaPredicted RBP37.36■■■■□ 3.57
UBE2E3-202ENST00000410062 ZNF777Q9ULD5 760 aaPredicted RBP37.36■■■■□ 3.57
UBE2E3-202ENST00000410062 ITSN2Q9NZM3 1697 aa37.32■■■■□ 3.57
UBE2E3-202ENST00000410062 POGZQ7Z3K3 1410 aa37.3■■■■□ 3.56
UBE2E3-202ENST00000410062 SAMD9LQ8IVG5 1584 aa37.29■■■■□ 3.56
UBE2E3-202ENST00000410062 ABCC1P33527 1531 aa37.29■■■■□ 3.56
UBE2E3-202ENST00000410062 ARHGEF12Q9NZN5 1544 aa37.27■■■■□ 3.56
UBE2E3-202ENST00000410062 AFAP1Q8N556 730 aa37.21■■■■□ 3.55
UBE2E3-202ENST00000410062 ZNF644Q9H582 1327 aaPredicted RBP37.21■■■■□ 3.55
UBE2E3-202ENST00000410062 ZMYM4Q5VZL5 1548 aa37.2■■■■□ 3.55
UBE2E3-202ENST00000410062 ZNF518AQ6AHZ1 1483 aa37.2■■■■□ 3.55
UBE2E3-202ENST00000410062 TRAPPC8Q9Y2L5 1435 aa37.19■■■■□ 3.54
UBE2E3-202ENST00000410062 SYCP2Q9BX26 1530 aa37.19■■■■□ 3.54
UBE2E3-202ENST00000410062 HNRNPMP52272 730 aaKnown RBP eCLIP37.17■■■■□ 3.547e-8■■■■□ 26.6
UBE2E3-202ENST00000410062 PLEKHH2Q8IVE3 1493 aa37.16■■■■□ 3.54
UBE2E3-202ENST00000410062 KDM5CP41229 1560 aa37.14■■■■□ 3.54
UBE2E3-202ENST00000410062 KIAA1107Q9UPP5 1409 aa37.14■■■■□ 3.54
UBE2E3-202ENST00000410062 MYOM3Q5VTT5 1437 aa37.13■■■■□ 3.53
UBE2E3-202ENST00000410062 YEATS2Q9ULM3 1422 aa37.11■■■■□ 3.53
UBE2E3-202ENST00000410062 MAGI2Q86UL8 1455 aa37.11■■■■□ 3.53
UBE2E3-202ENST00000410062 ZFYVE16Q7Z3T8 1539 aa37.1■■■■□ 3.53
UBE2E3-202ENST00000410062 ARHGEF40Q8TER5 1519 aa37.1■■■■□ 3.53
UBE2E3-202ENST00000410062 CAMSAP2Q08AD1 1489 aa37.09■■■■□ 3.53
UBE2E3-202ENST00000410062 MYT1LQ9UL68 1186 aa37.07■■■■□ 3.52
UBE2E3-202ENST00000410062 HECW2Q9P2P5 1572 aa37.05■■■■□ 3.52
UBE2E3-202ENST00000410062 PPARGC1BQ86YN6 1023 aaKnown RBP37.05■■■■□ 3.52
UBE2E3-202ENST00000410062 MBD5Q9P267 1494 aa37.04■■■■□ 3.52
UBE2E3-202ENST00000410062 MIA2Q96PC5 1412 aa37.03■■■■□ 3.52
UBE2E3-202ENST00000410062 MLH3Q9UHC1 1453 aa37.01■■■■□ 3.52
UBE2E3-202ENST00000410062 SPAG9O60271 1321 aaKnown RBP36.96■■■■□ 3.51
UBE2E3-202ENST00000410062 KIDINS220Q9ULH0 1771 aa36.95■■■■□ 3.51
UBE2E3-202ENST00000410062 FGD6Q6ZV73 1430 aa36.94■■■■□ 3.5
UBE2E3-202ENST00000410062 ATP10AO60312 1499 aa36.93■■■■□ 3.5
UBE2E3-202ENST00000410062 KDM4FA0A1W2PPD8 638 aa36.93■■■■□ 3.5
UBE2E3-202ENST00000410062 ABCA6Q8N139 1617 aa36.93■■■■□ 3.5
UBE2E3-202ENST00000410062 PTPN23Q9H3S7 1636 aa36.92■■■■□ 3.5
UBE2E3-202ENST00000410062 DIP2CQ9Y2E4 1556 aa36.92■■■■□ 3.5
UBE2E3-202ENST00000410062 ARID4BQ4LE39 1312 aaPredicted RBP36.92■■■■□ 3.5
UBE2E3-202ENST00000410062 CCDC141Q6ZP82 1450 aa36.91■■■■□ 3.5
UBE2E3-202ENST00000410062 SIGLEC1Q9BZZ2 1709 aa36.9■■■■□ 3.5
UBE2E3-202ENST00000410062 ARHGEF5Q12774 1597 aa36.89■■■■□ 3.5
UBE2E3-202ENST00000410062 ATP7AQ04656 1500 aa36.89■■■■□ 3.5
UBE2E3-202ENST00000410062 C9orf84Q5VXU9 1444 aa36.88■■■■□ 3.49
UBE2E3-202ENST00000410062 INO80Q9ULG1 1556 aaPredicted RBP36.88■■■■□ 3.49
UBE2E3-202ENST00000410062 RSPH4AQ5TD94 716 aa36.87■■■■□ 3.49
UBE2E3-202ENST00000410062 TCOF1Q13428 1488 aaKnown RBP36.83■■■■□ 3.49
UBE2E3-202ENST00000410062 TSPY4P0CV99 314 aa36.78■■■■□ 3.48
UBE2E3-202ENST00000410062 TSPY10P0CW01 314 aa36.78■■■■□ 3.48
UBE2E3-202ENST00000410062 RTEL1-TNFRSF6BF6WH68 1400 aa36.78■■■■□ 3.48
UBE2E3-202ENST00000410062 REREQ9P2R6 1566 aa36.77■■■■□ 3.48
UBE2E3-202ENST00000410062 BCORL1Q5H9F3 1711 aa36.77■■■■□ 3.48
UBE2E3-202ENST00000410062 FAM50AQ14320 339 aaKnown RBP36.74■■■■□ 3.47
UBE2E3-202ENST00000410062 MLECQ14165 292 aa36.73■■■■□ 3.47
UBE2E3-202ENST00000410062 ABCC5O15440 1437 aa36.71■■■■□ 3.47
UBE2E3-202ENST00000410062 AEBP2Q6ZN18 517 aaPredicted RBP36.7■■■■□ 3.47
UBE2E3-202ENST00000410062 ADAMTSL3P82987 1691 aa36.7■■■■□ 3.47
UBE2E3-202ENST00000410062 DNMT1P26358 1616 aaKnown RBP36.69■■■■□ 3.46
UBE2E3-202ENST00000410062 A2MP01023 1474 aa36.69■■■■□ 3.46
UBE2E3-202ENST00000410062 MAST1Q9Y2H9 1570 aa36.69■■■■□ 3.46
UBE2E3-202ENST00000410062 ADGBQ8N7X0 1667 aa36.68■■■■□ 3.46
UBE2E3-202ENST00000410062 DAPK1P53355 1430 aa36.68■■■■□ 3.46
UBE2E3-202ENST00000410062 CROCC2H7BZ55 1655 aa36.67■■■■□ 3.46
UBE2E3-202ENST00000410062 AGLP35573 1532 aa36.66■■■■□ 3.46
UBE2E3-202ENST00000410062 PLXNC1O60486 1568 aa36.64■■■■□ 3.46
UBE2E3-202ENST00000410062 MADDQ8WXG6 1647 aa36.63■■■■□ 3.45
UBE2E3-202ENST00000410062 SHANK2Q9UPX8 1470 aa36.61■■■■□ 3.45
UBE2E3-202ENST00000410062 DHX29Q7Z478 1369 aaKnown RBP36.58■■■■□ 3.45
UBE2E3-202ENST00000410062 CHIC2Q9UKJ5 165 aa36.56■■■■□ 3.44
UBE2E3-202ENST00000410062 RIMS1Q86UR5 1692 aaKnown RBP36.53■■■■□ 3.44
UBE2E3-202ENST00000410062 FER1L4A9Z1Z3 1794 aa36.53■■■■□ 3.44
UBE2E3-202ENST00000410062 RRBP1Q9P2E9 1410 aaKnown RBP36.51■■■■□ 3.43
UBE2E3-202ENST00000410062 PTPRMP28827 1452 aa36.5■■■■□ 3.43
UBE2E3-202ENST00000410062 RRP7BPQ9NSQ0 103 aa36.49■■■■□ 3.43
UBE2E3-202ENST00000410062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.48■■■■□ 3.439e-7■■■□□ 16.5
UBE2E3-202ENST00000410062 KIF15Q9NS87 1388 aa36.47■■■■□ 3.43
UBE2E3-202ENST00000410062 PTPRKQ15262 1439 aa36.46■■■■□ 3.43
UBE2E3-202ENST00000410062 KIF3BO15066 747 aa36.45■■■■□ 3.43
UBE2E3-202ENST00000410062 GGT6Q6P531 493 aa36.45■■■■□ 3.43
UBE2E3-202ENST00000410062 ITGAEP38570 1179 aa36.44■■■■□ 3.42
UBE2E3-202ENST00000410062 ANKRD30AQ9BXX3 1397 aa36.44■■■■□ 3.42
UBE2E3-202ENST00000410062 DUOX2Q9NRD8 1548 aa36.43■■■■□ 3.42
UBE2E3-202ENST00000410062 NCOA1Q15788 1441 aa36.42■■■■□ 3.42
UBE2E3-202ENST00000410062 ADGRL2O95490 1459 aa36.41■■■■□ 3.42
UBE2E3-202ENST00000410062 PLPPR3Q6T4P5 718 aa36.4■■■■□ 3.42
UBE2E3-202ENST00000410062 ESF1Q9H501 851 aaKnown RBP36.39■■■■□ 3.42
UBE2E3-202ENST00000410062 EIF2AK4Q9P2K8 1649 aaKnown RBP36.34■■■■□ 3.41
UBE2E3-202ENST00000410062 ERBINQ96RT1 1412 aa36.32■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms