RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
TTC7A-204ENST00000409825 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.79
TTC7A-204ENST00000409825 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
TTC7A-204ENST00000409825 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.01■□□□□ 0.79
TTC7A-204ENST00000409825 SAFB2Q14151 953 aaKnown RBP eCLIP20■□□□□ 0.79
TTC7A-204ENST00000409825 SYNJ1O43426 1573 aa20■□□□□ 0.79
TTC7A-204ENST00000409825 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
TTC7A-204ENST00000409825 MYOM3Q5VTT5 1437 aa19.98■□□□□ 0.79
TTC7A-204ENST00000409825 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
TTC7A-204ENST00000409825 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
TTC7A-204ENST00000409825 KIAA0586Q9BVV6 1533 aa19.96■□□□□ 0.79
TTC7A-204ENST00000409825 MAGI1Q96QZ7 1491 aaPredicted RBP19.95■□□□□ 0.78
TTC7A-204ENST00000409825 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
TTC7A-204ENST00000409825 FOXD1Q16676 465 aa19.94■□□□□ 0.78
TTC7A-204ENST00000409825 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
TTC7A-204ENST00000409825 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
TTC7A-204ENST00000409825 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
TTC7A-204ENST00000409825 VGFO15240 615 aaPredicted RBP19.93■□□□□ 0.78
TTC7A-204ENST00000409825 UACAQ9BZF9 1416 aa19.92■□□□□ 0.78
TTC7A-204ENST00000409825 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
TTC7A-204ENST00000409825 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
TTC7A-204ENST00000409825 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
TTC7A-204ENST00000409825 EFCAB5A4FU69 1503 aa19.88■□□□□ 0.77
TTC7A-204ENST00000409825 PAK3O75914 559 aaPredicted RBP19.88■□□□□ 0.77
TTC7A-204ENST00000409825 CCDC144AA2RUR9 1427 aa19.87■□□□□ 0.77
TTC7A-204ENST00000409825 ROCK2O75116 1388 aaKnown RBP19.86■□□□□ 0.77
TTC7A-204ENST00000409825 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
TTC7A-204ENST00000409825 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
TTC7A-204ENST00000409825 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
TTC7A-204ENST00000409825 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
TTC7A-204ENST00000409825 SOX12O15370 315 aa19.84■□□□□ 0.77
TTC7A-204ENST00000409825 TNNT2P45379 298 aaPredicted RBP19.83■□□□□ 0.77
TTC7A-204ENST00000409825 ARXQ96QS3 562 aa19.83■□□□□ 0.77
TTC7A-204ENST00000409825 KIF21BO75037 1637 aa19.83■□□□□ 0.76
TTC7A-204ENST00000409825 KIF15Q9NS87 1388 aa19.83■□□□□ 0.76
TTC7A-204ENST00000409825 AFAP1Q8N556 730 aa19.82■□□□□ 0.76
TTC7A-204ENST00000409825 NGDNQ8NEJ9 315 aaKnown RBP19.82■□□□□ 0.76
TTC7A-204ENST00000409825 NUTM2DQ5VT03 806 aaPredicted RBP19.82■□□□□ 0.76
TTC7A-204ENST00000409825 MORC1Q86VD1 984 aa19.82■□□□□ 0.76
TTC7A-204ENST00000409825 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
TTC7A-204ENST00000409825 TERF2IPQ9NYB0 399 aa19.81■□□□□ 0.76
TTC7A-204ENST00000409825 U2SURPO15042 1029 aaKnown RBP19.81■□□□□ 0.76
TTC7A-204ENST00000409825 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
TTC7A-204ENST00000409825 MYH16Q9H6N6 1097 aa19.8■□□□□ 0.76
TTC7A-204ENST00000409825 FYCO1Q9BQS8 1478 aa19.8■□□□□ 0.76
TTC7A-204ENST00000409825 CSB-PGBD3P0DP91 1061 aa19.79■□□□□ 0.76
TTC7A-204ENST00000409825 POGZQ7Z3K3 1410 aa19.78■□□□□ 0.76
TTC7A-204ENST00000409825 TROQ12816 1431 aaPredicted RBP19.77■□□□□ 0.76
TTC7A-204ENST00000409825 FGD6Q6ZV73 1430 aa19.77■□□□□ 0.76
TTC7A-204ENST00000409825 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
TTC7A-204ENST00000409825 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
TTC7A-204ENST00000409825 STAC3Q96MF2 364 aa19.74■□□□□ 0.75
TTC7A-204ENST00000409825 NPHP1O15259 732 aa19.73■□□□□ 0.75
TTC7A-204ENST00000409825 L3MBTL2Q969R5 705 aa19.73■□□□□ 0.75
TTC7A-204ENST00000409825 CCDC9Q9Y3X0 531 aaKnown RBP19.73■□□□□ 0.75
TTC7A-204ENST00000409825 IQGAP2Q13576 1575 aa19.73■□□□□ 0.75
TTC7A-204ENST00000409825 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
TTC7A-204ENST00000409825 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
TTC7A-204ENST00000409825 LRRC9Q6ZRR7 1453 aa19.72■□□□□ 0.75
TTC7A-204ENST00000409825 TRAK1Q9UPV9 953 aa19.71■□□□□ 0.75
TTC7A-204ENST00000409825 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
TTC7A-204ENST00000409825 CUL7Q14999 1698 aa19.7■□□□□ 0.74
TTC7A-204ENST00000409825 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
TTC7A-204ENST00000409825 ANKRD50Q9ULJ7 1429 aa19.7■□□□□ 0.74
TTC7A-204ENST00000409825 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
TTC7A-204ENST00000409825 SCAPERQ9BY12 1400 aa19.67■□□□□ 0.74
TTC7A-204ENST00000409825 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
TTC7A-204ENST00000409825 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
TTC7A-204ENST00000409825 RTF1Q92541 710 aaKnown RBP19.66■□□□□ 0.74
TTC7A-204ENST00000409825 THEMISQ8N1K5 641 aaPredicted RBP19.66■□□□□ 0.74
TTC7A-204ENST00000409825 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
TTC7A-204ENST00000409825 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
TTC7A-204ENST00000409825 UPF2Q9HAU5 1272 aaKnown RBP19.64■□□□□ 0.73
TTC7A-204ENST00000409825 NUTM2FA1L443 756 aa19.64■□□□□ 0.73
TTC7A-204ENST00000409825 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
TTC7A-204ENST00000409825 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
TTC7A-204ENST00000409825 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
TTC7A-204ENST00000409825 ATF3P18847 181 aa19.61■□□□□ 0.73
TTC7A-204ENST00000409825 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
TTC7A-204ENST00000409825 PHLDB1Q86UU1 1377 aa19.61■□□□□ 0.73
TTC7A-204ENST00000409825 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
TTC7A-204ENST00000409825 GTF3C3Q9Y5Q9 886 aa19.59■□□□□ 0.73
TTC7A-204ENST00000409825 AMPHP49418 695 aa19.58■□□□□ 0.73
TTC7A-204ENST00000409825 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.73
TTC7A-204ENST00000409825 MIER1Q8N108 512 aa19.58■□□□□ 0.73
TTC7A-204ENST00000409825 CHMP4BQ9H444 224 aaKnown RBP19.58■□□□□ 0.72
TTC7A-204ENST00000409825 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
TTC7A-204ENST00000409825 CCDC136Q96JN2 1154 aa19.57■□□□□ 0.72
TTC7A-204ENST00000409825 SLC52A1Q9NWF4 448 aa19.57■□□□□ 0.72
TTC7A-204ENST00000409825 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
TTC7A-204ENST00000409825 FTSJ3Q8IY81 847 aaKnown RBP19.56■□□□□ 0.72
TTC7A-204ENST00000409825 CALD1Q05682 793 aaKnown RBP19.55■□□□□ 0.72
TTC7A-204ENST00000409825 MS4A1P11836 297 aa19.54■□□□□ 0.72
TTC7A-204ENST00000409825 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
TTC7A-204ENST00000409825 FKBP8Q14318 412 aa19.54■□□□□ 0.72
TTC7A-204ENST00000409825 EPRSP07814 1512 aaKnown RBP19.53■□□□□ 0.72
TTC7A-204ENST00000409825 PLB1Q6P1J6 1458 aa19.53■□□□□ 0.72
TTC7A-204ENST00000409825 MINK1Q8N4C8 1332 aaPredicted RBP19.53■□□□□ 0.72
TTC7A-204ENST00000409825 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
TTC7A-204ENST00000409825 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms