RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.57
CHMP3-204ENST00000409727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHMP3-204ENST00000409727 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
CHMP3-204ENST00000409727 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
CHMP3-204ENST00000409727 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
CHMP3-204ENST00000409727 ASXL2Q76L83 1435 aa18.61■□□□□ 0.57
CHMP3-204ENST00000409727 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
CHMP3-204ENST00000409727 PREX2Q70Z35 1606 aa18.57■□□□□ 0.56
CHMP3-204ENST00000409727 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
CHMP3-204ENST00000409727 RAB3GAP2Q9H2M9 1393 aa18.56■□□□□ 0.56
CHMP3-204ENST00000409727 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
CHMP3-204ENST00000409727 ARHGAP5Q13017 1502 aa18.56■□□□□ 0.56
CHMP3-204ENST00000409727 DAPK1P53355 1430 aa18.56■□□□□ 0.56
CHMP3-204ENST00000409727 MYO5CQ9NQX4 1742 aa18.56■□□□□ 0.56
CHMP3-204ENST00000409727 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
CHMP3-204ENST00000409727 ABCC5O15440 1437 aa18.54■□□□□ 0.56
CHMP3-204ENST00000409727 DNMT1P26358 1616 aaKnown RBP18.54■□□□□ 0.56
CHMP3-204ENST00000409727 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.55
CHMP3-204ENST00000409727 SAMD9LQ8IVG5 1584 aa18.51■□□□□ 0.55
CHMP3-204ENST00000409727 PLCH2O75038 1416 aa18.5■□□□□ 0.55
CHMP3-204ENST00000409727 HFM1A2PYH4 1435 aa18.5■□□□□ 0.55
CHMP3-204ENST00000409727 NAIPQ13075 1403 aa18.47■□□□□ 0.55
CHMP3-204ENST00000409727 ABCA9Q8IUA7 1624 aa18.47■□□□□ 0.55
CHMP3-204ENST00000409727 EFCAB2Q5VUJ9 269 aa18.46■□□□□ 0.55
CHMP3-204ENST00000409727 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
CHMP3-204ENST00000409727 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.54
CHMP3-204ENST00000409727 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
CHMP3-204ENST00000409727 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
CHMP3-204ENST00000409727 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
CHMP3-204ENST00000409727 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
CHMP3-204ENST00000409727 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
CHMP3-204ENST00000409727 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
CHMP3-204ENST00000409727 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
CHMP3-204ENST00000409727 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
CHMP3-204ENST00000409727 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
CHMP3-204ENST00000409727 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
CHMP3-204ENST00000409727 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
CHMP3-204ENST00000409727 FANCAO15360 1455 aa18.4■□□□□ 0.54
CHMP3-204ENST00000409727 CCDC141Q6ZP82 1450 aa18.4■□□□□ 0.54
CHMP3-204ENST00000409727 PLEKHH2Q8IVE3 1493 aa18.4■□□□□ 0.54
CHMP3-204ENST00000409727 ARHGEF12Q9NZN5 1544 aa18.4■□□□□ 0.54
CHMP3-204ENST00000409727 ADGBQ8N7X0 1667 aa18.4■□□□□ 0.54
CHMP3-204ENST00000409727 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
CHMP3-204ENST00000409727 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
CHMP3-204ENST00000409727 KDM6BO15054 1643 aa18.39■□□□□ 0.53
CHMP3-204ENST00000409727 NCOA1Q15788 1441 aa18.38■□□□□ 0.53
CHMP3-204ENST00000409727 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
CHMP3-204ENST00000409727 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
CHMP3-204ENST00000409727 ABCC1P33527 1531 aa18.37■□□□□ 0.53
CHMP3-204ENST00000409727 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
CHMP3-204ENST00000409727 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
CHMP3-204ENST00000409727 ADGRL2O95490 1459 aa18.36■□□□□ 0.53
CHMP3-204ENST00000409727 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
CHMP3-204ENST00000409727 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
CHMP3-204ENST00000409727 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.53
CHMP3-204ENST00000409727 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
CHMP3-204ENST00000409727 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
CHMP3-204ENST00000409727 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
CHMP3-204ENST00000409727 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
CHMP3-204ENST00000409727 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
CHMP3-204ENST00000409727 ANKRD50Q9ULJ7 1429 aa18.28■□□□□ 0.52
CHMP3-204ENST00000409727 MAP3K4Q9Y6R4 1608 aa18.28■□□□□ 0.52
CHMP3-204ENST00000409727 MAST1Q9Y2H9 1570 aa18.28■□□□□ 0.52
CHMP3-204ENST00000409727 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
CHMP3-204ENST00000409727 GLI2P10070 1586 aa18.27■□□□□ 0.52
CHMP3-204ENST00000409727 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
CHMP3-204ENST00000409727 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.52
CHMP3-204ENST00000409727 CFAP74Q9C0B2 1584 aa18.26■□□□□ 0.51
CHMP3-204ENST00000409727 PLXNC1O60486 1568 aa18.22■□□□□ 0.51
CHMP3-204ENST00000409727 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
CHMP3-204ENST00000409727 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
CHMP3-204ENST00000409727 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
CHMP3-204ENST00000409727 NEO1Q92859 1461 aa18.2■□□□□ 0.5
CHMP3-204ENST00000409727 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
CHMP3-204ENST00000409727 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
CHMP3-204ENST00000409727 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
CHMP3-204ENST00000409727 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
CHMP3-204ENST00000409727 RAPGEF3O95398 923 aa18.18■□□□□ 0.5
CHMP3-204ENST00000409727 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
CHMP3-204ENST00000409727 RTEL1-TNFRSF6BF6WH68 1400 aa18.18■□□□□ 0.5
CHMP3-204ENST00000409727 POGZQ7Z3K3 1410 aa18.18■□□□□ 0.5
CHMP3-204ENST00000409727 DENND4BO75064 1496 aaPredicted RBP18.17■□□□□ 0.5
CHMP3-204ENST00000409727 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
CHMP3-204ENST00000409727 DUOX2Q9NRD8 1548 aa18.17■□□□□ 0.5
CHMP3-204ENST00000409727 NUP155O75694 1391 aa18.17■□□□□ 0.5
CHMP3-204ENST00000409727 ACIN1Q9UKV3 1341 aaKnown RBP18.16■□□□□ 0.5
CHMP3-204ENST00000409727 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
CHMP3-204ENST00000409727 KIF13AQ9H1H9 1805 aa18.16■□□□□ 0.5
CHMP3-204ENST00000409727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.58e-8■■■□□ 17.3
CHMP3-204ENST00000409727 PZPP20742 1482 aa18.15■□□□□ 0.5
CHMP3-204ENST00000409727 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
CHMP3-204ENST00000409727 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
CHMP3-204ENST00000409727 KDM5CP41229 1560 aa18.12■□□□□ 0.49
CHMP3-204ENST00000409727 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
CHMP3-204ENST00000409727 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
CHMP3-204ENST00000409727 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
CHMP3-204ENST00000409727 HECW2Q9P2P5 1572 aa18.1■□□□□ 0.49
CHMP3-204ENST00000409727 PKD2Q13563 968 aa18.09■□□□□ 0.49
CHMP3-204ENST00000409727 RICTORQ6R327 1708 aa18.08■□□□□ 0.48
CHMP3-204ENST00000409727 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms