RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CFAP74Q9C0B2 1584 aa25.66■■□□□ 1.7
TSPAN4-208ENST00000409531 DENND4BO75064 1496 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-208ENST00000409531 MYO5CQ9NQX4 1742 aa25.63■■□□□ 1.69
TSPAN4-208ENST00000409531 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-208ENST00000409531 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-208ENST00000409531 SCAPERQ9BY12 1400 aa25.61■■□□□ 1.69
TSPAN4-208ENST00000409531 ADGRL1O94910 1474 aa25.6■■□□□ 1.69
TSPAN4-208ENST00000409531 ARHGAP5Q13017 1502 aa25.6■■□□□ 1.69
TSPAN4-208ENST00000409531 GPATCH8Q9UKJ3 1502 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-208ENST00000409531 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
TSPAN4-208ENST00000409531 FRMPD1Q5SYB0 1578 aa25.53■■□□□ 1.68
TSPAN4-208ENST00000409531 CDC42BPBQ9Y5S2 1711 aa25.53■■□□□ 1.68
TSPAN4-208ENST00000409531 CFDP1Q9UEE9 299 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-208ENST00000409531 RICTORQ6R327 1708 aa25.51■■□□□ 1.67
TSPAN4-208ENST00000409531 PREX2Q70Z35 1606 aa25.51■■□□□ 1.67
TSPAN4-208ENST00000409531 NCOA2Q15596 1464 aa25.51■■□□□ 1.67
TSPAN4-208ENST00000409531 ZNF777Q9ULD5 760 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-208ENST00000409531 POGZQ7Z3K3 1410 aa25.5■■□□□ 1.67
TSPAN4-208ENST00000409531 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
TSPAN4-208ENST00000409531 AFAP1Q8N556 730 aa25.49■■□□□ 1.67
TSPAN4-208ENST00000409531 CDC42BPAQ5VT25 1732 aa25.48■■□□□ 1.67
TSPAN4-208ENST00000409531 MAGI2Q86UL8 1455 aa25.47■■□□□ 1.67
TSPAN4-208ENST00000409531 HECW2Q9P2P5 1572 aa25.46■■□□□ 1.67
TSPAN4-208ENST00000409531 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.67
TSPAN4-208ENST00000409531 ZMYM4Q5VZL5 1548 aa25.45■■□□□ 1.66
TSPAN4-208ENST00000409531 ZNF518AQ6AHZ1 1483 aa25.44■■□□□ 1.66
TSPAN4-208ENST00000409531 ARHGEF12Q9NZN5 1544 aa25.41■■□□□ 1.66
TSPAN4-208ENST00000409531 HNRNPMP52272 730 aaKnown RBP eCLIP25.4■■□□□ 1.66
TSPAN4-208ENST00000409531 YEATS2Q9ULM3 1422 aa25.4■■□□□ 1.66
TSPAN4-208ENST00000409531 TRAPPC8Q9Y2L5 1435 aa25.4■■□□□ 1.66
TSPAN4-208ENST00000409531 ABCC1P33527 1531 aa25.4■■□□□ 1.66
TSPAN4-208ENST00000409531 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.66
TSPAN4-208ENST00000409531 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-208ENST00000409531 ZFYVE16Q7Z3T8 1539 aa25.38■■□□□ 1.65
TSPAN4-208ENST00000409531 MYOM3Q5VTT5 1437 aa25.38■■□□□ 1.65
TSPAN4-208ENST00000409531 KIAA1107Q9UPP5 1409 aa25.38■■□□□ 1.65
TSPAN4-208ENST00000409531 PLEKHH2Q8IVE3 1493 aa25.37■■□□□ 1.65
TSPAN4-208ENST00000409531 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
TSPAN4-208ENST00000409531 SAMD9LQ8IVG5 1584 aa25.36■■□□□ 1.65
TSPAN4-208ENST00000409531 ZNF644Q9H582 1327 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-208ENST00000409531 KDM5CP41229 1560 aa25.36■■□□□ 1.65
TSPAN4-208ENST00000409531 ATP10AO60312 1499 aa25.34■■□□□ 1.65
TSPAN4-208ENST00000409531 MLH3Q9UHC1 1453 aa25.34■■□□□ 1.65
TSPAN4-208ENST00000409531 MIA2Q96PC5 1412 aa25.33■■□□□ 1.65
TSPAN4-208ENST00000409531 SYCP2Q9BX26 1530 aa25.31■■□□□ 1.64
TSPAN4-208ENST00000409531 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
TSPAN4-208ENST00000409531 SPAG9O60271 1321 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-208ENST00000409531 RSPH4AQ5TD94 716 aa25.27■■□□□ 1.64
TSPAN4-208ENST00000409531 C9orf84Q5VXU9 1444 aa25.26■■□□□ 1.63
TSPAN4-208ENST00000409531 PTPN23Q9H3S7 1636 aa25.26■■□□□ 1.63
TSPAN4-208ENST00000409531 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
TSPAN4-208ENST00000409531 RRBP1Q9P2E9 1410 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-208ENST00000409531 MLECQ14165 292 aa25.21■■□□□ 1.63
TSPAN4-208ENST00000409531 BCORL1Q5H9F3 1711 aa25.21■■□□□ 1.63
TSPAN4-208ENST00000409531 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.63
TSPAN4-208ENST00000409531 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.63
TSPAN4-208ENST00000409531 DIP2CQ9Y2E4 1556 aa25.2■■□□□ 1.62
TSPAN4-208ENST00000409531 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.62
TSPAN4-208ENST00000409531 KIDINS220Q9ULH0 1771 aa25.19■■□□□ 1.62
TSPAN4-208ENST00000409531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.624e-6■■■■■ 46.2
TSPAN4-208ENST00000409531 ABCA6Q8N139 1617 aa25.16■■□□□ 1.62
TSPAN4-208ENST00000409531 SIGLEC1Q9BZZ2 1709 aa25.16■■□□□ 1.62
TSPAN4-208ENST00000409531 TSPY4P0CV99 314 aa25.15■■□□□ 1.62
TSPAN4-208ENST00000409531 TSPY10P0CW01 314 aa25.15■■□□□ 1.62
TSPAN4-208ENST00000409531 REREQ9P2R6 1566 aa25.15■■□□□ 1.62
TSPAN4-208ENST00000409531 FAM50AQ14320 339 aaKnown RBP25.14■■□□□ 1.62
TSPAN4-208ENST00000409531 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
TSPAN4-208ENST00000409531 RTEL1-TNFRSF6BF6WH68 1400 aa25.14■■□□□ 1.62
TSPAN4-208ENST00000409531 CCDC141Q6ZP82 1450 aa25.14■■□□□ 1.61
TSPAN4-208ENST00000409531 PTPRMP28827 1452 aa25.12■■□□□ 1.61
TSPAN4-208ENST00000409531 AGLP35573 1532 aa25.11■■□□□ 1.61
TSPAN4-208ENST00000409531 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
TSPAN4-208ENST00000409531 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
TSPAN4-208ENST00000409531 MADDQ8WXG6 1647 aa25.1■■□□□ 1.61
TSPAN4-208ENST00000409531 FBXO41Q8TF61 875 aa25.08■■□□□ 1.6
TSPAN4-208ENST00000409531 DNMT1P26358 1616 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-208ENST00000409531 A2MP01023 1474 aa25.07■■□□□ 1.6
TSPAN4-208ENST00000409531 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-208ENST00000409531 CROCC2H7BZ55 1655 aa25.03■■□□□ 1.6
TSPAN4-208ENST00000409531 DHX29Q7Z478 1369 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-208ENST00000409531 ESF1Q9H501 851 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-208ENST00000409531 DAPK1P53355 1430 aa25.02■■□□□ 1.6
TSPAN4-208ENST00000409531 RIMS1Q86UR5 1692 aaKnown RBP25.01■■□□□ 1.59
TSPAN4-208ENST00000409531 PLPPR3Q6T4P5 718 aa24.99■■□□□ 1.59
TSPAN4-208ENST00000409531 ABCC5O15440 1437 aa24.99■■□□□ 1.59
TSPAN4-208ENST00000409531 ADGBQ8N7X0 1667 aa24.98■■□□□ 1.59
TSPAN4-208ENST00000409531 PLXNC1O60486 1568 aa24.98■■□□□ 1.59
TSPAN4-208ENST00000409531 GGT6Q6P531 493 aa24.98■■□□□ 1.59
TSPAN4-208ENST00000409531 SHANK2Q9UPX8 1470 aa24.98■■□□□ 1.59
TSPAN4-208ENST00000409531 FER1L4A9Z1Z3 1794 aa24.97■■□□□ 1.59
TSPAN4-208ENST00000409531 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
TSPAN4-208ENST00000409531 KIF3BO15066 747 aa24.95■■□□□ 1.58
TSPAN4-208ENST00000409531 CEBPAP49715 358 aaPredicted RBP24.95■■□□□ 1.58
TSPAN4-208ENST00000409531 MAST1Q9Y2H9 1570 aa24.95■■□□□ 1.58
TSPAN4-208ENST00000409531 ITGAEP38570 1179 aa24.94■■□□□ 1.58
TSPAN4-208ENST00000409531 CNTLNQ9NXG0 1405 aa24.92■■□□□ 1.58
TSPAN4-208ENST00000409531 PTPRKQ15262 1439 aa24.88■■□□□ 1.57
TSPAN4-208ENST00000409531 RRP7BPQ9NSQ0 103 aa24.87■■□□□ 1.57
TSPAN4-208ENST00000409531 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
TSPAN4-208ENST00000409531 ADGRL2O95490 1459 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms