RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 KIF3BO15066 747 aa32.25■■■□□ 2.75
SPIRE1-202ENST00000409402 CSB-PGBD3P0DP91 1061 aa32.22■■■□□ 2.75
SPIRE1-202ENST00000409402 FGD1P98174 961 aa32.21■■■□□ 2.75
SPIRE1-202ENST00000409402 KANK4Q5T7N3 995 aaPredicted RBP32.21■■■□□ 2.75
SPIRE1-202ENST00000409402 FOXD1Q16676 465 aa32.2■■■□□ 2.75
SPIRE1-202ENST00000409402 EID1Q9Y6B2 187 aa32.2■■■□□ 2.75
SPIRE1-202ENST00000409402 RGS3P49796 1198 aa32.2■■■□□ 2.75
SPIRE1-202ENST00000409402 KCNJ4P48050 445 aa32.2■■■□□ 2.74
SPIRE1-202ENST00000409402 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
SPIRE1-202ENST00000409402 ROCK2O75116 1388 aaKnown RBP32.19■■■□□ 2.74
SPIRE1-202ENST00000409402 HSPA5P11021 654 aaKnown RBP32.18■■■□□ 2.74
SPIRE1-202ENST00000409402 MPHOSPH9Q99550 1183 aa32.17■■■□□ 2.74
SPIRE1-202ENST00000409402 SPAG9O60271 1321 aaKnown RBP32.17■■■□□ 2.74
SPIRE1-202ENST00000409402 RSPH4AQ5TD94 716 aa32.16■■■□□ 2.74
SPIRE1-202ENST00000409402 KTN1Q86UP2 1357 aaKnown RBP32.16■■■□□ 2.74
SPIRE1-202ENST00000409402 HNRNPMP52272 730 aaKnown RBP eCLIP32.15■■■□□ 2.74
SPIRE1-202ENST00000409402 RAPGEF2Q9Y4G8 1499 aa32.14■■■□□ 2.74
SPIRE1-202ENST00000409402 EIF3AQ14152 1382 aaKnown RBP32.14■■■□□ 2.74
SPIRE1-202ENST00000409402 PPP4R2Q9NY27 417 aa32.14■■■□□ 2.74
SPIRE1-202ENST00000409402 WASHC2CQ9Y4E1 1318 aa32.12■■■□□ 2.73
SPIRE1-202ENST00000409402 JPH4Q96JJ6 628 aa32.12■■■□□ 2.73
SPIRE1-202ENST00000409402 TULP1O00294 542 aaPredicted RBP32.12■■■□□ 2.73
SPIRE1-202ENST00000409402 TRIM44Q96DX7 344 aaPredicted RBP32.11■■■□□ 2.73
SPIRE1-202ENST00000409402 TPRNQ4KMQ1 711 aa32.1■■■□□ 2.73
SPIRE1-202ENST00000409402 TAOK2Q9UL54 1235 aa32.1■■■□□ 2.73
SPIRE1-202ENST00000409402 CCDC18Q5T9S5 1454 aa32.08■■■□□ 2.73
SPIRE1-202ENST00000409402 CALD1Q05682 793 aaKnown RBP32.08■■■□□ 2.73
SPIRE1-202ENST00000409402 NAP1L2Q9ULW6 460 aaPredicted RBP32.07■■■□□ 2.72
SPIRE1-202ENST00000409402 FHOD3Q2V2M9 1422 aa32.03■■■□□ 2.72
SPIRE1-202ENST00000409402 U2AF1L5P0DN76 240 aaPredicted RBP32.03■■■□□ 2.72
SPIRE1-202ENST00000409402 U2AF1Q01081 240 aaKnown RBP eCLIP32.03■■■□□ 2.72
SPIRE1-202ENST00000409402 CCDC9Q9Y3X0 531 aaKnown RBP32.01■■■□□ 2.71
SPIRE1-202ENST00000409402 PTMAP06454 111 aaKnown RBP32.01■■■□□ 2.71
SPIRE1-202ENST00000409402 WIZO95785 1651 aa32.01■■■□□ 2.71
SPIRE1-202ENST00000409402 TERF2IPQ9NYB0 399 aa32■■■□□ 2.71
SPIRE1-202ENST00000409402 IPO8O15397 1037 aaKnown RBP32■■■□□ 2.71
SPIRE1-202ENST00000409402 HSP90AB1P08238 724 aaKnown RBP32■■■□□ 2.71
SPIRE1-202ENST00000409402 RAB3GAP2Q9H2M9 1393 aa31.99■■■□□ 2.71
SPIRE1-202ENST00000409402 CCER2I3L3R5 266 aa31.97■■■□□ 2.71
SPIRE1-202ENST00000409402 CHMP4AQ9BY43 222 aa31.97■■■□□ 2.71
SPIRE1-202ENST00000409402 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
SPIRE1-202ENST00000409402 ZNF330Q9Y3S2 320 aaPredicted RBP31.96■■■□□ 2.71
SPIRE1-202ENST00000409402 NGDNQ8NEJ9 315 aaKnown RBP31.95■■■□□ 2.71
SPIRE1-202ENST00000409402 MCCP23508 829 aa31.94■■■□□ 2.7
SPIRE1-202ENST00000409402 RALBP1Q15311 655 aa31.94■■■□□ 2.7
SPIRE1-202ENST00000409402 NUTM2DQ5VT03 806 aaPredicted RBP31.93■■■□□ 2.7
SPIRE1-202ENST00000409402 CFAP44Q96MT7 982 aa31.92■■■□□ 2.7
SPIRE1-202ENST00000409402 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
SPIRE1-202ENST00000409402 TMX4Q9H1E5 349 aaPredicted RBP31.88■■■□□ 2.69
SPIRE1-202ENST00000409402 GLIPR1L2Q4G1C9 344 aa31.86■■■□□ 2.69
SPIRE1-202ENST00000409402 PTPRGP23470 1445 aa31.86■■■□□ 2.69
SPIRE1-202ENST00000409402 OSCARQ8IYS5 282 aa31.85■■■□□ 2.69
SPIRE1-202ENST00000409402 ISY1Q9ULR0 285 aaKnown RBP31.85■■■□□ 2.69
SPIRE1-202ENST00000409402 CYB5RLQ6IPT4 315 aa31.84■■■□□ 2.69
SPIRE1-202ENST00000409402 STK31Q9BXU1 1019 aa31.83■■■□□ 2.69
SPIRE1-202ENST00000409402 HSCBQ8IWL3 235 aa31.81■■■□□ 2.68
SPIRE1-202ENST00000409402 B4GALNT3Q6L9W6 998 aa31.81■■■□□ 2.68
SPIRE1-202ENST00000409402 GOLGA6L4A6NEF3 574 aa31.8■■■□□ 2.68
SPIRE1-202ENST00000409402 AMPHP49418 695 aa31.8■■■□□ 2.68
SPIRE1-202ENST00000409402 GOLGA6L6A8MZA4 724 aa31.79■■■□□ 2.68
SPIRE1-202ENST00000409402 APBB1O00213 710 aa31.79■■■□□ 2.68
SPIRE1-202ENST00000409402 PLCB2Q00722 1185 aa31.76■■■□□ 2.67
SPIRE1-202ENST00000409402 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
SPIRE1-202ENST00000409402 KIAA1211Q6ZU35 1233 aa31.75■■■□□ 2.67
SPIRE1-202ENST00000409402 ITPRIPQ8IWB1 547 aa31.75■■■□□ 2.67
SPIRE1-202ENST00000409402 L3MBTL2Q969R5 705 aa31.75■■■□□ 2.67
SPIRE1-202ENST00000409402 DNTTIP2Q5QJE6 756 aaKnown RBP31.73■■■□□ 2.67
SPIRE1-202ENST00000409402 HDAC5Q9UQL6 1122 aa31.73■■■□□ 2.67
SPIRE1-202ENST00000409402 TRAK1Q9UPV9 953 aa31.72■■■□□ 2.67
SPIRE1-202ENST00000409402 UACAQ9BZF9 1416 aa31.72■■■□□ 2.67
SPIRE1-202ENST00000409402 NUTM2FA1L443 756 aa31.71■■■□□ 2.67
SPIRE1-202ENST00000409402 LMOD3Q0VAK6 560 aa31.7■■■□□ 2.67
SPIRE1-202ENST00000409402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.7■■■□□ 2.67
SPIRE1-202ENST00000409402 CCDC144AA2RUR9 1427 aa31.69■■■□□ 2.66
SPIRE1-202ENST00000409402 RWDD1Q9H446 243 aaPredicted RBP31.68■■■□□ 2.66
SPIRE1-202ENST00000409402 TAF7LQ5H9L4 462 aa31.68■■■□□ 2.66
SPIRE1-202ENST00000409402 LTV1Q96GA3 475 aaPredicted RBP31.67■■■□□ 2.66
SPIRE1-202ENST00000409402 GORABQ5T7V8 394 aa31.67■■■□□ 2.66
SPIRE1-202ENST00000409402 CHMP3Q9Y3E7 222 aa31.66■■■□□ 2.66
SPIRE1-202ENST00000409402 VGFO15240 615 aaPredicted RBP31.66■■■□□ 2.66
SPIRE1-202ENST00000409402 GNL2Q13823 731 aaKnown RBP31.66■■■□□ 2.66
SPIRE1-202ENST00000409402 RCAN3Q9UKA8 241 aa31.66■■■□□ 2.66
SPIRE1-202ENST00000409402 NRDCO43847 1150 aa31.66■■■□□ 2.66
SPIRE1-202ENST00000409402 SMC4Q9NTJ3 1288 aa31.62■■■□□ 2.65
SPIRE1-202ENST00000409402 GPATCH3Q96I76 525 aa31.6■■■□□ 2.65
SPIRE1-202ENST00000409402 CLSTN1O94985 981 aa31.59■■■□□ 2.65
SPIRE1-202ENST00000409402 NOP58Q9Y2X3 529 aaKnown RBP31.58■■■□□ 2.65
SPIRE1-202ENST00000409402 HMMRO75330 724 aa31.58■■■□□ 2.65
SPIRE1-202ENST00000409402 NLRP13Q86W25 1043 aa31.56■■■□□ 2.64
SPIRE1-202ENST00000409402 G3V3G9 751 aa31.56■■■□□ 2.64
SPIRE1-202ENST00000409402 DCAF8Q5TAQ9 597 aa31.56■■■□□ 2.64
SPIRE1-202ENST00000409402 CCDC146Q8IYE0 955 aa31.53■■■□□ 2.64
SPIRE1-202ENST00000409402 GAPVD1Q14C86 1478 aa31.53■■■□□ 2.64
SPIRE1-202ENST00000409402 SLC4A10Q6U841 1118 aa31.53■■■□□ 2.64
SPIRE1-202ENST00000409402 PMFBP1Q8TBY8 1022 aa31.53■■■□□ 2.64
SPIRE1-202ENST00000409402 COG3Q96JB2 828 aa31.52■■■□□ 2.64
SPIRE1-202ENST00000409402 EVC2Q86UK5 1308 aa31.52■■■□□ 2.64
SPIRE1-202ENST00000409402 GTF2E1P29083 439 aaPredicted RBP31.51■■■□□ 2.64
SPIRE1-202ENST00000409402 EVA1CP58658 441 aa31.5■■■□□ 2.63
SPIRE1-202ENST00000409402 FAM69CQ0P6D2 419 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms