RNA–Protein interactions for RNA: ENST00000409380.5

SLC3A1-204, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-204ENST00000409380 FYCO1Q9BQS8 1478 aa10.59□□□□□ -0.71
SLC3A1-204ENST00000409380 PCF11O94913 1555 aaKnown RBP10.59□□□□□ -0.71
SLC3A1-204ENST00000409380 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
SLC3A1-204ENST00000409380 PUS7Q96PZ0 661 aaKnown RBP10.58□□□□□ -0.72
SLC3A1-204ENST00000409380 TIAM1Q13009 1591 aa10.58□□□□□ -0.72
SLC3A1-204ENST00000409380 UGGT2Q9NYU1 1516 aa10.57□□□□□ -0.72
SLC3A1-204ENST00000409380 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
SLC3A1-204ENST00000409380 CFAP43Q8NDM7 1665 aa10.56□□□□□ -0.72
SLC3A1-204ENST00000409380 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
SLC3A1-204ENST00000409380 FBLN2P98095 1184 aa10.55□□□□□ -0.72
SLC3A1-204ENST00000409380 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
SLC3A1-204ENST00000409380 POLR3GLQ9BT43 218 aa10.53□□□□□ -0.72
SLC3A1-204ENST00000409380 CCDC9Q9Y3X0 531 aaKnown RBP10.53□□□□□ -0.72
SLC3A1-204ENST00000409380 CEP170Q5SW79 1584 aa10.53□□□□□ -0.72
SLC3A1-204ENST00000409380 NUP160Q12769 1436 aa10.53□□□□□ -0.72
SLC3A1-204ENST00000409380 ZBTB22O15209 634 aa10.53□□□□□ -0.72
SLC3A1-204ENST00000409380 LRRC9Q6ZRR7 1453 aa10.53□□□□□ -0.72
SLC3A1-204ENST00000409380 SUPT16HQ9Y5B9 1047 aaKnown RBP10.52□□□□□ -0.73
SLC3A1-204ENST00000409380 KIAA0556O60303 1618 aa10.51□□□□□ -0.73
SLC3A1-204ENST00000409380 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
SLC3A1-204ENST00000409380 HECW1Q76N89 1606 aa10.49□□□□□ -0.73
SLC3A1-204ENST00000409380 RRBP1Q9P2E9 1410 aaKnown RBP10.49□□□□□ -0.73
SLC3A1-204ENST00000409380 DISP1Q96F81 1524 aa10.49□□□□□ -0.73
SLC3A1-204ENST00000409380 CCDC18Q5T9S5 1454 aa10.48□□□□□ -0.73
SLC3A1-204ENST00000409380 IRX6P78412 446 aaPredicted RBP10.48□□□□□ -0.73
SLC3A1-204ENST00000409380 CARMIL2Q6F5E8 1435 aa10.48□□□□□ -0.73
SLC3A1-204ENST00000409380 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
SLC3A1-204ENST00000409380 CHD1O14646 1710 aa10.47□□□□□ -0.73
SLC3A1-204ENST00000409380 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
SLC3A1-204ENST00000409380 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
SLC3A1-204ENST00000409380 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.74
SLC3A1-204ENST00000409380 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.74
SLC3A1-204ENST00000409380 TICAM2Q86XR7 235 aa10.46□□□□□ -0.74
SLC3A1-204ENST00000409380 CCNB3Q8WWL7 1395 aa10.46□□□□□ -0.74
SLC3A1-204ENST00000409380 LRRIQ1Q96JM4 1722 aa10.46□□□□□ -0.74
SLC3A1-204ENST00000409380 CFAP44Q96MT7 982 aa10.46□□□□□ -0.74
SLC3A1-204ENST00000409380 IPO4Q8TEX9 1081 aaKnown RBP10.45□□□□□ -0.74
SLC3A1-204ENST00000409380 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
SLC3A1-204ENST00000409380 EHBP1L1Q8N3D4 1523 aa10.44□□□□□ -0.74
SLC3A1-204ENST00000409380 MSH5O43196 834 aa10.43□□□□□ -0.74
SLC3A1-204ENST00000409380 CCER1Q8TC90 406 aaPredicted RBP10.43□□□□□ -0.74
SLC3A1-204ENST00000409380 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
SLC3A1-204ENST00000409380 EPRSP07814 1512 aaKnown RBP10.43□□□□□ -0.74
SLC3A1-204ENST00000409380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
SLC3A1-204ENST00000409380 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.42□□□□□ -0.74
SLC3A1-204ENST00000409380 SUPT6HQ7KZ85 1726 aaKnown RBP10.42□□□□□ -0.74
SLC3A1-204ENST00000409380 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
SLC3A1-204ENST00000409380 CHRM1P11229 460 aaPredicted RBP10.41□□□□□ -0.74
SLC3A1-204ENST00000409380 TEX2Q8IWB9 1127 aa10.41□□□□□ -0.74
SLC3A1-204ENST00000409380 IL27Q8NEV9 243 aa10.41□□□□□ -0.74
SLC3A1-204ENST00000409380 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
SLC3A1-204ENST00000409380 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
SLC3A1-204ENST00000409380 PRG4Q92954 1404 aaPredicted RBP10.39□□□□□ -0.75
SLC3A1-204ENST00000409380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
SLC3A1-204ENST00000409380 NCOA2Q15596 1464 aa10.38□□□□□ -0.75
SLC3A1-204ENST00000409380 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
SLC3A1-204ENST00000409380 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
SLC3A1-204ENST00000409380 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
SLC3A1-204ENST00000409380 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
SLC3A1-204ENST00000409380 MAGI3Q5TCQ9 1506 aa10.36□□□□□ -0.75
SLC3A1-204ENST00000409380 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
SLC3A1-204ENST00000409380 FGD6Q6ZV73 1430 aa10.36□□□□□ -0.75
SLC3A1-204ENST00000409380 CLSTN1O94985 981 aa10.36□□□□□ -0.75
SLC3A1-204ENST00000409380 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 ABCA8O94911 1581 aa10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 PLB1Q6P1J6 1458 aa10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 NCLP19338 710 aaKnown RBP10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 ZNF592Q92610 1267 aa10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 ARID3AQ99856 593 aa10.35□□□□□ -0.75
SLC3A1-204ENST00000409380 PTPRGP23470 1445 aa10.34□□□□□ -0.75
SLC3A1-204ENST00000409380 ITGAEP38570 1179 aa10.34□□□□□ -0.75
SLC3A1-204ENST00000409380 CLASP1Q7Z460 1538 aa10.34□□□□□ -0.75
SLC3A1-204ENST00000409380 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
SLC3A1-204ENST00000409380 RRP9O43818 475 aaKnown RBP10.33□□□□□ -0.76
SLC3A1-204ENST00000409380 ZFP91Q96JP5 570 aaPredicted RBP10.33□□□□□ -0.76
SLC3A1-204ENST00000409380 TROQ12816 1431 aaPredicted RBP10.31□□□□□ -0.76
SLC3A1-204ENST00000409380 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
SLC3A1-204ENST00000409380 PTPN23Q9H3S7 1636 aa10.31□□□□□ -0.76
SLC3A1-204ENST00000409380 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
SLC3A1-204ENST00000409380 FTSJ3Q8IY81 847 aaKnown RBP10.3□□□□□ -0.76
SLC3A1-204ENST00000409380 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
SLC3A1-204ENST00000409380 TCOF1Q13428 1488 aaKnown RBP10.29□□□□□ -0.76
SLC3A1-204ENST00000409380 UACAQ9BZF9 1416 aa10.29□□□□□ -0.76
SLC3A1-204ENST00000409380 SETD5Q9C0A6 1442 aa10.29□□□□□ -0.76
SLC3A1-204ENST00000409380 ADCY10Q96PN6 1610 aa10.28□□□□□ -0.76
SLC3A1-204ENST00000409380 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
SLC3A1-204ENST00000409380 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
SLC3A1-204ENST00000409380 ATP10BO94823 1461 aa10.28□□□□□ -0.76
SLC3A1-204ENST00000409380 CHMP4BQ9H444 224 aaKnown RBP10.27□□□□□ -0.76
SLC3A1-204ENST00000409380 RIMBP3CA6NJZ7 1639 aa10.27□□□□□ -0.77
SLC3A1-204ENST00000409380 RIMBP3BA6NNM3 1639 aa10.27□□□□□ -0.77
SLC3A1-204ENST00000409380 RIMBP3Q9UFD9 1639 aa10.27□□□□□ -0.77
SLC3A1-204ENST00000409380 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
SLC3A1-204ENST00000409380 TMED8Q6PL24 325 aaPredicted RBP10.27□□□□□ -0.77
SLC3A1-204ENST00000409380 CNPY4Q8N129 248 aa10.26□□□□□ -0.77
SLC3A1-204ENST00000409380 ERCC6L2Q5T890 1561 aa10.26□□□□□ -0.77
SLC3A1-204ENST00000409380 ITSN2Q9NZM3 1697 aa10.26□□□□□ -0.77
SLC3A1-204ENST00000409380 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
SLC3A1-204ENST00000409380 ARID4BQ4LE39 1312 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms