RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
LSM5-202ENST00000409292 ATP10BO94823 1461 aa12.98□□□□□ -0.33
LSM5-202ENST00000409292 KIF21BO75037 1637 aa12.98□□□□□ -0.33
LSM5-202ENST00000409292 NEO1Q92859 1461 aa12.97□□□□□ -0.33
LSM5-202ENST00000409292 PLEKHD1A6NEE1 506 aa12.97□□□□□ -0.33
LSM5-202ENST00000409292 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
LSM5-202ENST00000409292 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
LSM5-202ENST00000409292 RAPGEF3O95398 923 aa12.95□□□□□ -0.34
LSM5-202ENST00000409292 RAPGEF6Q8TEU7 1601 aa12.94□□□□□ -0.34
LSM5-202ENST00000409292 PTPRMP28827 1452 aa12.93□□□□□ -0.34
LSM5-202ENST00000409292 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
LSM5-202ENST00000409292 EEA1Q15075 1411 aa12.92□□□□□ -0.34
LSM5-202ENST00000409292 POGZQ7Z3K3 1410 aa12.92□□□□□ -0.34
LSM5-202ENST00000409292 SAMD9Q5K651 1589 aa12.9□□□□□ -0.34
LSM5-202ENST00000409292 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.34
LSM5-202ENST00000409292 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
LSM5-202ENST00000409292 CFAP74Q9C0B2 1584 aa12.88□□□□□ -0.35
LSM5-202ENST00000409292 ADAMTSL3P82987 1691 aa12.88□□□□□ -0.35
LSM5-202ENST00000409292 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
LSM5-202ENST00000409292 POTEHQ6S545 545 aa12.86□□□□□ -0.35
LSM5-202ENST00000409292 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
LSM5-202ENST00000409292 FANCAO15360 1455 aa12.85□□□□□ -0.35
LSM5-202ENST00000409292 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
LSM5-202ENST00000409292 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
LSM5-202ENST00000409292 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
LSM5-202ENST00000409292 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
LSM5-202ENST00000409292 PCF11O94913 1555 aaKnown RBP12.85□□□□□ -0.35
LSM5-202ENST00000409292 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
LSM5-202ENST00000409292 MADDQ8WXG6 1647 aa12.83□□□□□ -0.36
LSM5-202ENST00000409292 MAGI2Q86UL8 1455 aa12.83□□□□□ -0.36
LSM5-202ENST00000409292 EFCAB5A4FU69 1503 aa12.83□□□□□ -0.36
LSM5-202ENST00000409292 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.36
LSM5-202ENST00000409292 ZFYVE16Q7Z3T8 1539 aa12.8□□□□□ -0.36
LSM5-202ENST00000409292 MLECQ14165 292 aa12.8□□□□□ -0.36
LSM5-202ENST00000409292 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
LSM5-202ENST00000409292 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
LSM5-202ENST00000409292 FRMPD1Q5SYB0 1578 aa12.8□□□□□ -0.36
LSM5-202ENST00000409292 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
LSM5-202ENST00000409292 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
LSM5-202ENST00000409292 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
LSM5-202ENST00000409292 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
LSM5-202ENST00000409292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
LSM5-202ENST00000409292 RICTORQ6R327 1708 aa12.77□□□□□ -0.36
LSM5-202ENST00000409292 HSPA2P54652 639 aa12.77□□□□□ -0.37
LSM5-202ENST00000409292 SCAPERQ9BY12 1400 aa12.77□□□□□ -0.37
LSM5-202ENST00000409292 FMN1Q68DA7 1419 aa12.76□□□□□ -0.37
LSM5-202ENST00000409292 PLCH2O75038 1416 aa12.75□□□□□ -0.37
LSM5-202ENST00000409292 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
LSM5-202ENST00000409292 CLIP1P30622 1438 aa12.74□□□□□ -0.37
LSM5-202ENST00000409292 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 ATP10AO60312 1499 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 YEATS2Q9ULM3 1422 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 CERKQ8TCT0 537 aa12.73□□□□□ -0.37
LSM5-202ENST00000409292 C9orf84Q5VXU9 1444 aa12.72□□□□□ -0.37
LSM5-202ENST00000409292 HECW1Q76N89 1606 aa12.72□□□□□ -0.37
LSM5-202ENST00000409292 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.38
LSM5-202ENST00000409292 FER1L4A9Z1Z3 1794 aa12.71□□□□□ -0.38
LSM5-202ENST00000409292 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
LSM5-202ENST00000409292 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
LSM5-202ENST00000409292 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
LSM5-202ENST00000409292 MYO5CQ9NQX4 1742 aa12.68□□□□□ -0.38
LSM5-202ENST00000409292 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
LSM5-202ENST00000409292 KIF14Q15058 1648 aa12.67□□□□□ -0.38
LSM5-202ENST00000409292 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
LSM5-202ENST00000409292 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
LSM5-202ENST00000409292 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
LSM5-202ENST00000409292 PREX1Q8TCU6 1659 aa12.64□□□□□ -0.39
LSM5-202ENST00000409292 CEBPAP49715 358 aaPredicted RBP12.64□□□□□ -0.39
LSM5-202ENST00000409292 AFAP1Q8N556 730 aa12.64□□□□□ -0.39
LSM5-202ENST00000409292 SETD1BQ9UPS6 1966 aaKnown RBP12.63□□□□□ -0.39
LSM5-202ENST00000409292 ARHGAP35Q9NRY4 1499 aa12.61□□□□□ -0.39
LSM5-202ENST00000409292 CNTLNQ9NXG0 1405 aa12.6□□□□□ -0.39
LSM5-202ENST00000409292 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
LSM5-202ENST00000409292 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
LSM5-202ENST00000409292 KDM5CP41229 1560 aa12.59□□□□□ -0.39
LSM5-202ENST00000409292 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
LSM5-202ENST00000409292 SIGLEC1Q9BZZ2 1709 aa12.58□□□□□ -0.4
LSM5-202ENST00000409292 REREQ9P2R6 1566 aa12.58□□□□□ -0.4
LSM5-202ENST00000409292 PTPRTO14522 1441 aa12.57□□□□□ -0.4
LSM5-202ENST00000409292 TRAPPC8Q9Y2L5 1435 aa12.57□□□□□ -0.4
LSM5-202ENST00000409292 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
LSM5-202ENST00000409292 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
LSM5-202ENST00000409292 AGLP35573 1532 aa12.56□□□□□ -0.4
LSM5-202ENST00000409292 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
LSM5-202ENST00000409292 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
LSM5-202ENST00000409292 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
LSM5-202ENST00000409292 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
LSM5-202ENST00000409292 PREX2Q70Z35 1606 aa12.53□□□□□ -0.4
LSM5-202ENST00000409292 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
LSM5-202ENST00000409292 ABCC1P33527 1531 aa12.52□□□□□ -0.4
LSM5-202ENST00000409292 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
LSM5-202ENST00000409292 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
LSM5-202ENST00000409292 CDC42BPBQ9Y5S2 1711 aa12.51□□□□□ -0.41
LSM5-202ENST00000409292 CFDP1Q9UEE9 299 aaPredicted RBP12.5□□□□□ -0.41
LSM5-202ENST00000409292 NPATQ14207 1427 aa12.5□□□□□ -0.41
LSM5-202ENST00000409292 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms