RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 MS4A1P11836 297 aa20.28■□□□□ 0.84
SSFA2-202ENST00000409001 CASC1Q6TDU7 716 aa20.26■□□□□ 0.83
SSFA2-202ENST00000409001 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
SSFA2-202ENST00000409001 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
SSFA2-202ENST00000409001 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
SSFA2-202ENST00000409001 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
SSFA2-202ENST00000409001 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
SSFA2-202ENST00000409001 PTMAP06454 111 aaKnown RBP20.23■□□□□ 0.83
SSFA2-202ENST00000409001 SRPK2P78362 688 aaKnown RBP20.23■□□□□ 0.83
SSFA2-202ENST00000409001 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
SSFA2-202ENST00000409001 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
SSFA2-202ENST00000409001 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
SSFA2-202ENST00000409001 NAP1L5Q96NT1 182 aaPredicted RBP20.21■□□□□ 0.83
SSFA2-202ENST00000409001 KANK1Q14678 1352 aa20.21■□□□□ 0.83
SSFA2-202ENST00000409001 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
SSFA2-202ENST00000409001 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
SSFA2-202ENST00000409001 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
SSFA2-202ENST00000409001 GGT6Q6P531 493 aa20.18■□□□□ 0.82
SSFA2-202ENST00000409001 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
SSFA2-202ENST00000409001 ARID4BQ4LE39 1312 aaPredicted RBP20.18■□□□□ 0.82
SSFA2-202ENST00000409001 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
SSFA2-202ENST00000409001 ST20-MTHFSA0A0A6YYL1 179 aa20.17■□□□□ 0.82
SSFA2-202ENST00000409001 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
SSFA2-202ENST00000409001 SLKQ9H2G2 1235 aaPredicted RBP20.16■□□□□ 0.82
SSFA2-202ENST00000409001 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
SSFA2-202ENST00000409001 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
SSFA2-202ENST00000409001 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
SSFA2-202ENST00000409001 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
SSFA2-202ENST00000409001 STK26Q9P289 416 aa20.15■□□□□ 0.82
SSFA2-202ENST00000409001 A0A0G2JS52 829 aa20.15■□□□□ 0.82
SSFA2-202ENST00000409001 DNTTIP2Q5QJE6 756 aaKnown RBP20.14■□□□□ 0.82
SSFA2-202ENST00000409001 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
SSFA2-202ENST00000409001 SOX12O15370 315 aa20.13■□□□□ 0.81
SSFA2-202ENST00000409001 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
SSFA2-202ENST00000409001 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
SSFA2-202ENST00000409001 PLCB2Q00722 1185 aa20.11■□□□□ 0.81
SSFA2-202ENST00000409001 EFCAB2Q5VUJ9 269 aa20.1■□□□□ 0.81
SSFA2-202ENST00000409001 CLUAP1Q96AJ1 413 aa20.09■□□□□ 0.81
SSFA2-202ENST00000409001 CCDC18Q5T9S5 1454 aa20.09■□□□□ 0.81
SSFA2-202ENST00000409001 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.81
SSFA2-202ENST00000409001 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
SSFA2-202ENST00000409001 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
SSFA2-202ENST00000409001 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
SSFA2-202ENST00000409001 PLIN1O60240 522 aa20.06■□□□□ 0.8
SSFA2-202ENST00000409001 APBB1O00213 710 aa20.06■□□□□ 0.8
SSFA2-202ENST00000409001 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
SSFA2-202ENST00000409001 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
SSFA2-202ENST00000409001 GZF1Q9H116 711 aaPredicted RBP20.06■□□□□ 0.8
SSFA2-202ENST00000409001 KIF15Q9NS87 1388 aa20.05■□□□□ 0.8
SSFA2-202ENST00000409001 IPO8O15397 1037 aaKnown RBP20.05■□□□□ 0.8
SSFA2-202ENST00000409001 MLECQ14165 292 aa20.05■□□□□ 0.8
SSFA2-202ENST00000409001 IGF1RP08069 1367 aa20.05■□□□□ 0.8
SSFA2-202ENST00000409001 KIF3BO15066 747 aa20.04■□□□□ 0.8
SSFA2-202ENST00000409001 EXOC6Q8TAG9 804 aa20.04■□□□□ 0.8
SSFA2-202ENST00000409001 PANK3Q9H999 370 aa20.04■□□□□ 0.8
SSFA2-202ENST00000409001 OS9Q13438 667 aaPredicted RBP20.04■□□□□ 0.8
SSFA2-202ENST00000409001 ZRSR1Q15695 479 aaKnown RBP20.02■□□□□ 0.8
SSFA2-202ENST00000409001 PHLDB1Q86UU1 1377 aa20.01■□□□□ 0.79
SSFA2-202ENST00000409001 USP47Q96K76 1375 aa20.01■□□□□ 0.79
SSFA2-202ENST00000409001 JPH4Q96JJ6 628 aa20.01■□□□□ 0.79
SSFA2-202ENST00000409001 KIF21BO75037 1637 aa20.01■□□□□ 0.79
SSFA2-202ENST00000409001 PDE4AP27815 886 aa20.01■□□□□ 0.79
SSFA2-202ENST00000409001 KCNJ4P48050 445 aa20■□□□□ 0.79
SSFA2-202ENST00000409001 HDGFL2Q7Z4V5 671 aaPredicted RBP20■□□□□ 0.79
SSFA2-202ENST00000409001 SMC4Q9NTJ3 1288 aa19.99■□□□□ 0.79
SSFA2-202ENST00000409001 CENPJQ9HC77 1338 aaPredicted RBP19.99■□□□□ 0.79
SSFA2-202ENST00000409001 RRP1P56182 461 aaKnown RBP19.99■□□□□ 0.79
SSFA2-202ENST00000409001 MFAP1P55081 439 aaKnown RBP19.98■□□□□ 0.79
SSFA2-202ENST00000409001 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
SSFA2-202ENST00000409001 RSPH4AQ5TD94 716 aa19.98■□□□□ 0.79
SSFA2-202ENST00000409001 SLC4A3P48751 1232 aa19.96■□□□□ 0.79
SSFA2-202ENST00000409001 RRP7AQ9Y3A4 280 aaKnown RBP19.96■□□□□ 0.79
SSFA2-202ENST00000409001 TAOK2Q9UL54 1235 aa19.96■□□□□ 0.79
SSFA2-202ENST00000409001 FGD1P98174 961 aa19.95■□□□□ 0.78
SSFA2-202ENST00000409001 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
SSFA2-202ENST00000409001 HAP1P54257 671 aaPredicted RBP19.94■□□□□ 0.78
SSFA2-202ENST00000409001 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
SSFA2-202ENST00000409001 FANCIQ9NVI1 1328 aa19.94■□□□□ 0.78
SSFA2-202ENST00000409001 CCDC144AA2RUR9 1427 aa19.94■□□□□ 0.78
SSFA2-202ENST00000409001 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
SSFA2-202ENST00000409001 CRBNQ96SW2 442 aa19.93■□□□□ 0.78
SSFA2-202ENST00000409001 FGD6Q6ZV73 1430 aa19.93■□□□□ 0.78
SSFA2-202ENST00000409001 KIF7Q2M1P5 1343 aa19.92■□□□□ 0.78
SSFA2-202ENST00000409001 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
SSFA2-202ENST00000409001 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
SSFA2-202ENST00000409001 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
SSFA2-202ENST00000409001 BCL2L13Q9BXK5 485 aa19.92■□□□□ 0.78
SSFA2-202ENST00000409001 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
SSFA2-202ENST00000409001 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
SSFA2-202ENST00000409001 MSNP26038 577 aaKnown RBP19.91■□□□□ 0.78
SSFA2-202ENST00000409001 CCDC7Q96M83 1385 aa19.91■□□□□ 0.78
SSFA2-202ENST00000409001 MCCP23508 829 aa19.91■□□□□ 0.78
SSFA2-202ENST00000409001 CENPQQ7L2Z9 268 aaPredicted RBP19.9■□□□□ 0.78
SSFA2-202ENST00000409001 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.78
SSFA2-202ENST00000409001 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.89■□□□□ 0.77
SSFA2-202ENST00000409001 UACAQ9BZF9 1416 aa19.89■□□□□ 0.77
SSFA2-202ENST00000409001 CALD1Q05682 793 aaKnown RBP19.88■□□□□ 0.77
SSFA2-202ENST00000409001 NAP1L2Q9ULW6 460 aaPredicted RBP19.88■□□□□ 0.77
SSFA2-202ENST00000409001 GOLGA6L4A6NEF3 574 aa19.88■□□□□ 0.77
SSFA2-202ENST00000409001 LRRC9Q6ZRR7 1453 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms